RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 GZF1Q9H116 711 aaPredicted RBP11.04□□□□□ -0.64
LIMK2-201ENST00000331728 PLXNC1O60486 1568 aa11.04□□□□□ -0.64
LIMK2-201ENST00000331728 TMEM132EQ6IEE7 984 aa11.04□□□□□ -0.64
LIMK2-201ENST00000331728 DZIP1LQ8IYY4 767 aaKnown RBP11.04□□□□□ -0.64
LIMK2-201ENST00000331728 SRPK2P78362 688 aaKnown RBP11.03□□□□□ -0.64
LIMK2-201ENST00000331728 WDR63Q8IWG1 891 aa11.03□□□□□ -0.64
LIMK2-201ENST00000331728 NUTM2DQ5VT03 806 aaPredicted RBP11.03□□□□□ -0.64
LIMK2-201ENST00000331728 POLR3AO14802 1390 aaPredicted RBP11.02□□□□□ -0.65
LIMK2-201ENST00000331728 EVC2Q86UK5 1308 aa11.02□□□□□ -0.65
LIMK2-201ENST00000331728 GOLGA6L3A6NEY3 463 aa11.02□□□□□ -0.65
LIMK2-201ENST00000331728 IQGAP1P46940 1657 aa11.01□□□□□ -0.65
LIMK2-201ENST00000331728 STK26Q9P289 416 aa11.01□□□□□ -0.65
LIMK2-201ENST00000331728 RRAGDQ9NQL2 400 aaPredicted RBP11□□□□□ -0.65
LIMK2-201ENST00000331728 IPO8O15397 1037 aaKnown RBP11□□□□□ -0.65
LIMK2-201ENST00000331728 HSP90AB1P08238 724 aaKnown RBP11□□□□□ -0.65
LIMK2-201ENST00000331728 MVPQ14764 893 aaKnown RBP11□□□□□ -0.65
LIMK2-201ENST00000331728 TBC1D32Q96NH3 1257 aa11□□□□□ -0.65
LIMK2-201ENST00000331728 PCDHB15Q9Y5E8 787 aa11□□□□□ -0.65
LIMK2-201ENST00000331728 TRPM2O94759 1503 aa11□□□□□ -0.65
LIMK2-201ENST00000331728 TSR2Q969E8 191 aaKnown RBP11□□□□□ -0.65
LIMK2-201ENST00000331728 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
LIMK2-201ENST00000331728 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
LIMK2-201ENST00000331728 TNNQ9UQP3 1299 aa11□□□□□ -0.65
LIMK2-201ENST00000331728 KDM5AP29375 1690 aaKnown RBP11□□□□□ -0.65
LIMK2-201ENST00000331728 MADDQ8WXG6 1647 aa10.99□□□□□ -0.65
LIMK2-201ENST00000331728 TBC1D2Q9BYX2 928 aa10.99□□□□□ -0.65
LIMK2-201ENST00000331728 DDX19BQ9UMR2 479 aa10.99□□□□□ -0.65
LIMK2-201ENST00000331728 RLBP1P12271 317 aa10.99□□□□□ -0.65
LIMK2-201ENST00000331728 RTEL1-TNFRSF6BF6WH68 1400 aa10.99□□□□□ -0.65
LIMK2-201ENST00000331728 NLRP1Q9C000 1473 aa10.99□□□□□ -0.65
LIMK2-201ENST00000331728 CHMP5Q9NZZ3 219 aa10.98□□□□□ -0.65
LIMK2-201ENST00000331728 NOS1P29475 1434 aa10.98□□□□□ -0.65
LIMK2-201ENST00000331728 EXOSC9Q06265 439 aaKnown RBP10.98□□□□□ -0.65
LIMK2-201ENST00000331728 PNNQ9H307 717 aaKnown RBP10.98□□□□□ -0.65
LIMK2-201ENST00000331728 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
LIMK2-201ENST00000331728 ZMYM3Q14202 1370 aa10.98□□□□□ -0.65
LIMK2-201ENST00000331728 NAP1L5Q96NT1 182 aaPredicted RBP10.97□□□□□ -0.65
LIMK2-201ENST00000331728 CABP2Q9NPB3 220 aa10.97□□□□□ -0.65
LIMK2-201ENST00000331728 ERVK-7P63135 1459 aa10.97□□□□□ -0.65
LIMK2-201ENST00000331728 ABCC1P33527 1531 aa10.97□□□□□ -0.65
LIMK2-201ENST00000331728 MCM4P33991 863 aa10.97□□□□□ -0.65
LIMK2-201ENST00000331728 PTPRTO14522 1441 aa10.96□□□□□ -0.65
LIMK2-201ENST00000331728 GLIPR1L2Q4G1C9 344 aa10.96□□□□□ -0.65
LIMK2-201ENST00000331728 GGNBP2Q9H3C7 697 aa10.96□□□□□ -0.65
LIMK2-201ENST00000331728 MYOM1P52179 1685 aa10.96□□□□□ -0.65
LIMK2-201ENST00000331728 FANCAO15360 1455 aa10.96□□□□□ -0.65
LIMK2-201ENST00000331728 ADGRL1O94910 1474 aa10.96□□□□□ -0.65
LIMK2-201ENST00000331728 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
LIMK2-201ENST00000331728 XRCC6P12956 609 aaKnown RBP eCLIP10.96□□□□□ -0.65
LIMK2-201ENST00000331728 TRIM44Q96DX7 344 aaPredicted RBP10.96□□□□□ -0.66
LIMK2-201ENST00000331728 TERF2IPQ9NYB0 399 aa10.96□□□□□ -0.66
LIMK2-201ENST00000331728 CT47B1P0C2W7 299 aaPredicted RBP10.95□□□□□ -0.66
LIMK2-201ENST00000331728 RIPK4P57078 832 aa10.95□□□□□ -0.66
LIMK2-201ENST00000331728 HDGFL2Q7Z4V5 671 aaPredicted RBP10.95□□□□□ -0.66
LIMK2-201ENST00000331728 CHMP4BQ9H444 224 aaKnown RBP10.95□□□□□ -0.66
LIMK2-201ENST00000331728 CLTCL1P53675 1640 aa10.95□□□□□ -0.66
LIMK2-201ENST00000331728 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
LIMK2-201ENST00000331728 ANP32BQ92688 251 aaKnown RBP10.95□□□□□ -0.66
LIMK2-201ENST00000331728 LNPKQ9C0E8 428 aa10.94□□□□□ -0.66
LIMK2-201ENST00000331728 SPHKAPQ2M3C7 1700 aa10.94□□□□□ -0.66
LIMK2-201ENST00000331728 KIF16BQ96L93 1317 aa10.94□□□□□ -0.66
LIMK2-201ENST00000331728 GOLGA6L22H0YM25 854 aa10.94□□□□□ -0.66
LIMK2-201ENST00000331728 ATF7IPQ6VMQ6 1270 aa10.94□□□□□ -0.66
LIMK2-201ENST00000331728 FSD2A1L4K1 749 aa10.94□□□□□ -0.66
LIMK2-201ENST00000331728 GBP4Q96PP9 640 aa10.94□□□□□ -0.66
LIMK2-201ENST00000331728 TRAK2O60296 914 aa10.93□□□□□ -0.66
LIMK2-201ENST00000331728 CCDC27Q2M243 656 aa10.93□□□□□ -0.66
LIMK2-201ENST00000331728 C14orf93Q9H972 538 aaKnown RBP10.93□□□□□ -0.66
LIMK2-201ENST00000331728 MINK1Q8N4C8 1332 aaPredicted RBP10.93□□□□□ -0.66
LIMK2-201ENST00000331728 MRE11P49959 708 aa10.93□□□□□ -0.66
LIMK2-201ENST00000331728 NOB1Q9ULX3 412 aaKnown RBP10.93□□□□□ -0.66
LIMK2-201ENST00000331728 ATP7AQ04656 1500 aa10.93□□□□□ -0.66
LIMK2-201ENST00000331728 DIAPH1O60610 1272 aaKnown RBP10.93□□□□□ -0.66
LIMK2-201ENST00000331728 SSH1Q8WYL5 1049 aa10.93□□□□□ -0.66
LIMK2-201ENST00000331728 UGGT1Q9NYU2 1555 aa10.92□□□□□ -0.66
LIMK2-201ENST00000331728 CLCN1P35523 988 aa10.92□□□□□ -0.66
LIMK2-201ENST00000331728 TMPOP42166 694 aaKnown RBP10.92□□□□□ -0.66
LIMK2-201ENST00000331728 TRIM27P14373 513 aa10.92□□□□□ -0.66
LIMK2-201ENST00000331728 PANK2Q9BZ23 570 aa10.92□□□□□ -0.66
LIMK2-201ENST00000331728 SBNO2Q9Y2G9 1366 aa10.92□□□□□ -0.66
LIMK2-201ENST00000331728 FOXD4L1Q9NU39 408 aa10.91□□□□□ -0.66
LIMK2-201ENST00000331728 ERCC6L2Q5T890 1561 aa10.91□□□□□ -0.66
LIMK2-201ENST00000331728 ZFYVE16Q7Z3T8 1539 aa10.91□□□□□ -0.66
LIMK2-201ENST00000331728 CEP152O94986 1710 aa10.91□□□□□ -0.66
LIMK2-201ENST00000331728 ANKRD45Q5TZF3 282 aa10.91□□□□□ -0.66
LIMK2-201ENST00000331728 MYOM2P54296 1465 aa10.91□□□□□ -0.66
LIMK2-201ENST00000331728 RPGRIP1LQ68CZ1 1315 aa10.91□□□□□ -0.66
LIMK2-201ENST00000331728 TMEM57Q8N5G2 664 aa10.91□□□□□ -0.66
LIMK2-201ENST00000331728 SHROOM2Q13796 1616 aa10.9□□□□□ -0.66
LIMK2-201ENST00000331728 TET3O43151 1660 aa10.9□□□□□ -0.66
LIMK2-201ENST00000331728 CHD1O14646 1710 aa10.9□□□□□ -0.66
LIMK2-201ENST00000331728 NSD2O96028 1365 aa10.9□□□□□ -0.66
LIMK2-201ENST00000331728 CALD1Q05682 793 aaKnown RBP10.89□□□□□ -0.67
LIMK2-201ENST00000331728 ELL2O00472 640 aaPredicted RBP10.89□□□□□ -0.67
LIMK2-201ENST00000331728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.89□□□□□ -0.67
LIMK2-201ENST00000331728 ISY1Q9ULR0 285 aaKnown RBP10.89□□□□□ -0.67
LIMK2-201ENST00000331728 ANKRD36BQ8N2N9 1353 aa10.89□□□□□ -0.67
LIMK2-201ENST00000331728 ZCCHC11Q5TAX3 1644 aaKnown RBP10.89□□□□□ -0.67
LIMK2-201ENST00000331728 MAP3K4Q9Y6R4 1608 aa10.88□□□□□ -0.67
LIMK2-201ENST00000331728 KIAA1210Q9ULL0 1709 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms