RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 PSME1Q06323 249 aa15.22■□□□□ 0.03
FN1-201ENST00000323926 RRP12Q5JTH9 1297 aaKnown RBP15.22■□□□□ 0.03
FN1-201ENST00000323926 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
FN1-201ENST00000323926 R3HCC1Q9Y3T6 440 aaKnown RBP15.22■□□□□ 0.03
FN1-201ENST00000323926 POGZQ7Z3K3 1410 aa15.22■□□□□ 0.03
FN1-201ENST00000323926 ANKRD45Q5TZF3 282 aa15.22■□□□□ 0.03
FN1-201ENST00000323926 TXLNAP40222 546 aa15.22■□□□□ 0.03
FN1-201ENST00000323926 GPRASP1Q5JY77 1395 aa15.22■□□□□ 0.03
FN1-201ENST00000323926 CAGE1Q8TC20 777 aa15.22■□□□□ 0.03
FN1-201ENST00000323926 SASS6Q6UVJ0 657 aa15.21■□□□□ 0.03
FN1-201ENST00000323926 ZNF428Q96B54 188 aa15.21■□□□□ 0.03
FN1-201ENST00000323926 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
FN1-201ENST00000323926 EPRSP07814 1512 aaKnown RBP15.21■□□□□ 0.03
FN1-201ENST00000323926 CWC15Q9P013 229 aaKnown RBP15.21■□□□□ 0.03
FN1-201ENST00000323926 OLFM4Q6UX06 510 aa15.21■□□□□ 0.02
FN1-201ENST00000323926 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
FN1-201ENST00000323926 WWC2Q6AWC2 1192 aa15.2■□□□□ 0.02
FN1-201ENST00000323926 CCDC73Q6ZRK6 1079 aa15.2■□□□□ 0.02
FN1-201ENST00000323926 CAVIN1Q6NZI2 390 aaKnown RBP15.2■□□□□ 0.02
FN1-201ENST00000323926 JMYQ8N9B5 988 aa15.2■□□□□ 0.02
FN1-201ENST00000323926 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
FN1-201ENST00000323926 MBD3O95983 291 aa15.2■□□□□ 0.02
FN1-201ENST00000323926 HSP90B2PQ58FF3 399 aa15.2■□□□□ 0.02
FN1-201ENST00000323926 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
FN1-201ENST00000323926 HSP90AA2PQ14568 343 aaPredicted RBP15.2■□□□□ 0.02
FN1-201ENST00000323926 RILPL2Q969X0 211 aa15.2■□□□□ 0.02
FN1-201ENST00000323926 ANKRD1Q15327 319 aa15.19■□□□□ 0.02
FN1-201ENST00000323926 NCAPD3P42695 1498 aa15.19■□□□□ 0.02
FN1-201ENST00000323926 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.19■□□□□ 0.02
FN1-201ENST00000323926 ATF3P18847 181 aa15.19■□□□□ 0.02
FN1-201ENST00000323926 CALRP27797 417 aaKnown RBP15.19■□□□□ 0.02
FN1-201ENST00000323926 DZIP1LQ8IYY4 767 aaKnown RBP15.19■□□□□ 0.02
FN1-201ENST00000323926 SPRYD3Q8NCJ5 442 aa15.19■□□□□ 0.02
FN1-201ENST00000323926 DNAI2Q9GZS0 605 aa15.19■□□□□ 0.02
FN1-201ENST00000323926 GZF1Q9H116 711 aaPredicted RBP15.19■□□□□ 0.02
FN1-201ENST00000323926 PANK3Q9H999 370 aa15.19■□□□□ 0.02
FN1-201ENST00000323926 ANKRD50Q9ULJ7 1429 aa15.19■□□□□ 0.02
FN1-201ENST00000323926 MRC2Q9UBG0 1479 aa15.18■□□□□ 0.02
FN1-201ENST00000323926 CHMP5Q9NZZ3 219 aa15.18■□□□□ 0.02
FN1-201ENST00000323926 FANCIQ9NVI1 1328 aa15.18■□□□□ 0.02
FN1-201ENST00000323926 CNTROBQ8N137 903 aa15.18■□□□□ 0.02
FN1-201ENST00000323926 FAM135AQ9P2D6 1515 aa15.18■□□□□ 0.02
FN1-201ENST00000323926 KRI1Q8N9T8 703 aaKnown RBP15.18■□□□□ 0.02
FN1-201ENST00000323926 GAS2L2Q8NHY3 880 aa15.18■□□□□ 0.02
FN1-201ENST00000323926 PTPN23Q9H3S7 1636 aa15.17■□□□□ 0.02
FN1-201ENST00000323926 ST20-MTHFSA0A0A6YYL1 179 aa15.17■□□□□ 0.02
FN1-201ENST00000323926 TRIM21P19474 475 aaKnown RBP15.17■□□□□ 0.02
FN1-201ENST00000323926 MCTP1Q6DN14 999 aa15.17■□□□□ 0.02
FN1-201ENST00000323926 SMARCE1Q969G3 411 aa15.17■□□□□ 0.02
FN1-201ENST00000323926 THOC2Q8NI27 1593 aaKnown RBP15.17■□□□□ 0.02
FN1-201ENST00000323926 CT47A1Q5JQC4 288 aaPredicted RBP15.17■□□□□ 0.02
FN1-201ENST00000323926 GNAI3P08754 354 aa15.17■□□□□ 0.02
FN1-201ENST00000323926 GSE1Q14687 1217 aa15.17■□□□□ 0.02
FN1-201ENST00000323926 EIF2AK4Q9P2K8 1649 aaKnown RBP15.16■□□□□ 0.02
FN1-201ENST00000323926 KANK4Q5T7N3 995 aaPredicted RBP15.16■□□□□ 0.02
FN1-201ENST00000323926 RBM33Q96EV2 1170 aaKnown RBP15.16■□□□□ 0.02
FN1-201ENST00000323926 CREBRFQ8IUR6 639 aa15.16■□□□□ 0.02
FN1-201ENST00000323926 RAPGEF4Q8WZA2 1011 aa15.16■□□□□ 0.02
FN1-201ENST00000323926 GNL3LQ9NVN8 582 aaKnown RBP15.16■□□□□ 0.02
FN1-201ENST00000323926 TBC1D2BQ9UPU7 963 aa15.16■□□□□ 0.02
FN1-201ENST00000323926 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
FN1-201ENST00000323926 NCOA2Q15596 1464 aa15.15■□□□□ 0.02
FN1-201ENST00000323926 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
FN1-201ENST00000323926 SMC3Q9UQE7 1217 aa15.15■□□□□ 0.02
FN1-201ENST00000323926 SRCIN1Q9C0H9 1055 aa15.15■□□□□ 0.02
FN1-201ENST00000323926 APPP05067 770 aa15.15■□□□□ 0.02
FN1-201ENST00000323926 PCMTD1Q96MG8 357 aaPredicted RBP15.15■□□□□ 0.02
FN1-201ENST00000323926 ANKRD30BQ9BXX2 1392 aa15.14■□□□□ 0.01
FN1-201ENST00000323926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.14■□□□□ 0.01
FN1-201ENST00000323926 ANKRD18AQ8IVF6 992 aa15.14■□□□□ 0.01
FN1-201ENST00000323926 IQCEQ6IPM2 695 aa15.14■□□□□ 0.01
FN1-201ENST00000323926 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
FN1-201ENST00000323926 DESP17661 470 aa15.14■□□□□ 0.01
FN1-201ENST00000323926 PNISRQ8TF01 805 aaKnown RBP15.14■□□□□ 0.01
FN1-201ENST00000323926 ERLIN2O94905 339 aa15.13■□□□□ 0.01
FN1-201ENST00000323926 HMGN5P82970 282 aaKnown RBP15.13■□□□□ 0.01
FN1-201ENST00000323926 CCDC30Q5VVM6 783 aa15.13■□□□□ 0.01
FN1-201ENST00000323926 NFXL1Q6ZNB6 911 aa15.13■□□□□ 0.01
FN1-201ENST00000323926 TRAK1Q9UPV9 953 aa15.13■□□□□ 0.01
FN1-201ENST00000323926 HOMER1Q86YM7 354 aa15.13■□□□□ 0.01
FN1-201ENST00000323926 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.13■□□□□ 0.01
FN1-201ENST00000323926 DACH1Q9UI36 760 aa15.13■□□□□ 0.01
FN1-201ENST00000323926 NESP48681 1621 aa15.13■□□□□ 0.01
FN1-201ENST00000323926 AK9Q5TCS8 1911 aa15.12■□□□□ 0.01
FN1-201ENST00000323926 STIM1Q13586 685 aa15.12■□□□□ 0.01
FN1-201ENST00000323926 KIF6Q6ZMV9 814 aa15.12■□□□□ 0.01
FN1-201ENST00000323926 ANO2Q9NQ90 1003 aa15.12■□□□□ 0.01
FN1-201ENST00000323926 BICD2Q8TD16 824 aa15.12■□□□□ 0.01
FN1-201ENST00000323926 ZNF396Q96N95 335 aaPredicted RBP15.12■□□□□ 0.01
FN1-201ENST00000323926 CWC22Q9HCG8 908 aaKnown RBP15.11■□□□□ 0.01
FN1-201ENST00000323926 KIF1BO60333 1816 aa15.11■□□□□ 0.01
FN1-201ENST00000323926 FILIP1LQ4L180 1135 aa15.11■□□□□ 0.01
FN1-201ENST00000323926 BIVM-ERCC5R4GMW8 1640 aa15.11■□□□□ 0.01
FN1-201ENST00000323926 CCDC39Q9UFE4 941 aa15.11■□□□□ 0.01
FN1-201ENST00000323926 CCDC191Q8NCU4 936 aa15.11■□□□□ 0.01
FN1-201ENST00000323926 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
FN1-201ENST00000323926 ZSCAN25Q6NSZ9 544 aa15.1■□□□□ 0.01
FN1-201ENST00000323926 KINO60870 393 aaKnown RBP15.1■□□□□ 0.01
FN1-201ENST00000323926 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
FN1-201ENST00000323926 ZNF692Q9BU19 519 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms