RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
TSFM-201ENST00000323833 MST1RQ04912 1400 aa22.25■■□□□ 1.15
TSFM-201ENST00000323833 NBPF1Q3BBV0 1214 aa22.25■■□□□ 1.15
TSFM-201ENST00000323833 SIRT1Q96EB6 747 aa22.25■■□□□ 1.15
TSFM-201ENST00000323833 PHLPP1O60346 1717 aa22.24■■□□□ 1.15
TSFM-201ENST00000323833 PRAM1Q96QH2 718 aa22.24■■□□□ 1.15
TSFM-201ENST00000323833 CDC42BPGQ6DT37 1551 aa22.24■■□□□ 1.15
TSFM-201ENST00000323833 SAFB2Q14151 953 aaKnown RBP eCLIP22.23■■□□□ 1.15
TSFM-201ENST00000323833 FMN2Q9NZ56 1722 aa22.22■■□□□ 1.15
TSFM-201ENST00000323833 RGPD8O14715 1765 aaPredicted RBP22.22■■□□□ 1.15
TSFM-201ENST00000323833 POGKQ9P215 609 aa22.21■■□□□ 1.15
TSFM-201ENST00000323833 NBPF8Q3BBV2 869 aa22.2■■□□□ 1.14
TSFM-201ENST00000323833 C1orf167Q5SNV9 1468 aa22.18■■□□□ 1.14
TSFM-201ENST00000323833 BRINP3Q76B58 766 aa22.18■■□□□ 1.14
TSFM-201ENST00000323833 NHSL1Q5SYE7 1610 aa22.17■■□□□ 1.14
TSFM-201ENST00000323833 CCER1Q8TC90 406 aaPredicted RBP22.16■■□□□ 1.14
TSFM-201ENST00000323833 CLSPNQ9HAW4 1339 aa22.15■■□□□ 1.14
TSFM-201ENST00000323833 NUTM2FA1L443 756 aa22.15■■□□□ 1.14
TSFM-201ENST00000323833 AHDC1Q5TGY3 1603 aaPredicted RBP22.15■■□□□ 1.14
TSFM-201ENST00000323833 ADGRB2O60241 1585 aa22.15■■□□□ 1.14
TSFM-201ENST00000323833 COL16A1Q07092 1604 aaPredicted RBP22.14■■□□□ 1.14
TSFM-201ENST00000323833 MINK1Q8N4C8 1332 aaPredicted RBP22.13■■□□□ 1.13
TSFM-201ENST00000323833 ORAI2Q96SN7 254 aa22.13■■□□□ 1.13
TSFM-201ENST00000323833 HIRIP3Q9BW71 556 aaPredicted RBP22.13■■□□□ 1.13
TSFM-201ENST00000323833 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
TSFM-201ENST00000323833 QRICH2Q9H0J4 1663 aa22.12■■□□□ 1.13
TSFM-201ENST00000323833 USP32Q8NFA0 1604 aa22.1■■□□□ 1.13
TSFM-201ENST00000323833 DDX17Q92841 729 aaKnown RBP22.1■■□□□ 1.13
TSFM-201ENST00000323833 ESCO1Q5FWF5 840 aa22.08■■□□□ 1.13
TSFM-201ENST00000323833 RALGAPBQ86X10 1494 aa22.08■■□□□ 1.12
TSFM-201ENST00000323833 KIF1AQ12756 1690 aa22.05■■□□□ 1.12
TSFM-201ENST00000323833 GPRASP1Q5JY77 1395 aa22.05■■□□□ 1.12
TSFM-201ENST00000323833 CENPJQ9HC77 1338 aaPredicted RBP22.05■■□□□ 1.12
TSFM-201ENST00000323833 WASLO00401 505 aaPredicted RBP22.04■■□□□ 1.12
TSFM-201ENST00000323833 SHPRHQ149N8 1683 aa22.03■■□□□ 1.12
TSFM-201ENST00000323833 TULP4Q9NRJ4 1543 aa22.02■■□□□ 1.12
TSFM-201ENST00000323833 CARD11Q9BXL7 1154 aa22.02■■□□□ 1.12
TSFM-201ENST00000323833 TIMELESSQ9UNS1 1208 aa22.02■■□□□ 1.12
TSFM-201ENST00000323833 MED1Q15648 1581 aaPredicted RBP22.02■■□□□ 1.12
TSFM-201ENST00000323833 ITSN1Q15811 1721 aa22.02■■□□□ 1.12
TSFM-201ENST00000323833 ANKARQ7Z5J8 1434 aa22.01■■□□□ 1.11
TSFM-201ENST00000323833 PRR36Q9H6K5 1346 aa22■■□□□ 1.11
TSFM-201ENST00000323833 JCADQ9P266 1359 aa21.99■■□□□ 1.11
TSFM-201ENST00000323833 FOXO3O43524 673 aa21.99■■□□□ 1.11
TSFM-201ENST00000323833 CDK19Q9BWU1 502 aa21.99■■□□□ 1.11
TSFM-201ENST00000323833 EIF3AQ14152 1382 aaKnown RBP21.99■■□□□ 1.11
TSFM-201ENST00000323833 PHF8Q9UPP1 1060 aa21.98■■□□□ 1.11
TSFM-201ENST00000323833 SOS2Q07890 1332 aaPredicted RBP21.98■■□□□ 1.11
TSFM-201ENST00000323833 PXDNQ92626 1479 aa21.97■■□□□ 1.11
TSFM-201ENST00000323833 XPCQ01831 940 aaPredicted RBP21.97■■□□□ 1.11
TSFM-201ENST00000323833 NPHP3Q7Z494 1330 aa21.97■■□□□ 1.11
TSFM-201ENST00000323833 TOPAZ1Q8N9V7 1692 aa21.97■■□□□ 1.11
TSFM-201ENST00000323833 ATP7BP35670 1465 aa21.96■■□□□ 1.11
TSFM-201ENST00000323833 PMFBP1Q8TBY8 1022 aa21.95■■□□□ 1.1
TSFM-201ENST00000323833 LRRC59Q96AG4 307 aaKnown RBP21.95■■□□□ 1.1
TSFM-201ENST00000323833 NUDT16Q96DE0 195 aaKnown RBP21.94■■□□□ 1.1
TSFM-201ENST00000323833 DISP3Q9P2K9 1392 aa21.92■■□□□ 1.1
TSFM-201ENST00000323833 PNPLA6Q8IY17 1366 aa21.91■■□□□ 1.1
TSFM-201ENST00000323833 SRPK2P78362 688 aaKnown RBP21.91■■□□□ 1.1
TSFM-201ENST00000323833 CABP2Q9NPB3 220 aa21.91■■□□□ 1.1
TSFM-201ENST00000323833 KRT28Q7Z3Y7 464 aa21.9■■□□□ 1.1
TSFM-201ENST00000323833 TRPM3Q9HCF6 1732 aaPredicted RBP21.89■■□□□ 1.1
TSFM-201ENST00000323833 LRP6O75581 1613 aa21.89■■□□□ 1.09
TSFM-201ENST00000323833 COL22A1Q8NFW1 1626 aaPredicted RBP21.88■■□□□ 1.09
TSFM-201ENST00000323833 SPATA31A6Q5VVP1 1343 aa21.88■■□□□ 1.09
TSFM-201ENST00000323833 EVC2Q86UK5 1308 aa21.88■■□□□ 1.09
TSFM-201ENST00000323833 PSME1Q06323 249 aa21.88■■□□□ 1.09
TSFM-201ENST00000323833 NUTM2BA6NNL0 878 aaPredicted RBP21.87■■□□□ 1.09
TSFM-201ENST00000323833 NUTM2EB1AL46 878 aaPredicted RBP21.87■■□□□ 1.09
TSFM-201ENST00000323833 NUTM2AQ8IVF1 878 aaPredicted RBP21.87■■□□□ 1.09
TSFM-201ENST00000323833 NGDNQ8NEJ9 315 aaKnown RBP21.86■■□□□ 1.09
TSFM-201ENST00000323833 CCDC61Q9Y6R9 512 aa21.86■■□□□ 1.09
TSFM-201ENST00000323833 SBNO2Q9Y2G9 1366 aa21.86■■□□□ 1.09
TSFM-201ENST00000323833 ST20-MTHFSA0A0A6YYL1 179 aa21.85■■□□□ 1.09
TSFM-201ENST00000323833 PPIP5K1Q6PFW1 1433 aa21.84■■□□□ 1.09
TSFM-201ENST00000323833 USP47Q96K76 1375 aa21.84■■□□□ 1.09
TSFM-201ENST00000323833 SPATA31A3Q5VYP0 1347 aa21.83■■□□□ 1.09
TSFM-201ENST00000323833 ALS2Q96Q42 1657 aa21.83■■□□□ 1.09
TSFM-201ENST00000323833 ACEP12821 1306 aa21.82■■□□□ 1.08
TSFM-201ENST00000323833 TNS3Q68CZ2 1445 aa21.82■■□□□ 1.08
TSFM-201ENST00000323833 PLEKHG3A1L390 1219 aa21.82■■□□□ 1.08
TSFM-201ENST00000323833 MARF1Q9Y4F3 1742 aaKnown RBP21.82■■□□□ 1.08
TSFM-201ENST00000323833 SBNO1A3KN83 1393 aa21.81■■□□□ 1.08
TSFM-201ENST00000323833 POLR3AO14802 1390 aaPredicted RBP21.81■■□□□ 1.08
TSFM-201ENST00000323833 AKAP12Q02952 1782 aa21.81■■□□□ 1.08
TSFM-201ENST00000323833 MEX3CQ5U5Q3 659 aaKnown RBP21.8■■□□□ 1.08
TSFM-201ENST00000323833 TESK2Q96S53 571 aa21.8■■□□□ 1.08
TSFM-201ENST00000323833 ABCA3Q99758 1704 aa21.8■■□□□ 1.08
TSFM-201ENST00000323833 LMOD2Q6P5Q4 547 aa21.79■■□□□ 1.08
TSFM-201ENST00000323833 CABP1Q9NZU7 370 aa21.79■■□□□ 1.08
TSFM-201ENST00000323833 PAK3O75914 559 aaPredicted RBP21.76■■□□□ 1.07
TSFM-201ENST00000323833 PLEKHG5O94827 1062 aa21.76■■□□□ 1.07
TSFM-201ENST00000323833 RGS17Q9UGC6 210 aaPredicted RBP21.76■■□□□ 1.07
TSFM-201ENST00000323833 ATAD2Q6PL18 1390 aa21.75■■□□□ 1.07
TSFM-201ENST00000323833 ADAMTS2O95450 1211 aa21.75■■□□□ 1.07
TSFM-201ENST00000323833 CRYBG1Q9Y4K1 1723 aa21.75■■□□□ 1.07
TSFM-201ENST00000323833 ARHGEF10O15013 1369 aa21.74■■□□□ 1.07
TSFM-201ENST00000323833 CABLES1Q8TDN4 633 aa21.73■■□□□ 1.07
TSFM-201ENST00000323833 MON2Q7Z3U7 1717 aa21.72■■□□□ 1.07
TSFM-201ENST00000323833 C8orf37Q96NL8 207 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms