RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 FBLN1P23142 703 aa12.19□□□□□ -0.46
CD46-202ENST00000322918 PPM1GO15355 546 aaPredicted RBP12.18□□□□□ -0.46
CD46-202ENST00000322918 NEUROD2Q15784 382 aa12.17□□□□□ -0.46
CD46-202ENST00000322918 CDCA7LQ96GN5 454 aa12.17□□□□□ -0.46
CD46-202ENST00000322918 SLC24A1O60721 1099 aa12.17□□□□□ -0.46
CD46-202ENST00000322918 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.17□□□□□ -0.46
CD46-202ENST00000322918 EID1Q9Y6B2 187 aa12.17□□□□□ -0.46
CD46-202ENST00000322918 PRKCSHP14314 528 aaPredicted RBP12.16□□□□□ -0.46
CD46-202ENST00000322918 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
CD46-202ENST00000322918 NEURL4Q96JN8 1562 aa12.16□□□□□ -0.46
CD46-202ENST00000322918 KIAA1210Q9ULL0 1709 aa12.16□□□□□ -0.46
CD46-202ENST00000322918 KDM5AP29375 1690 aaKnown RBP12.16□□□□□ -0.46
CD46-202ENST00000322918 REREQ9P2R6 1566 aa12.15□□□□□ -0.46
CD46-202ENST00000322918 ASXL1Q8IXJ9 1541 aa12.15□□□□□ -0.46
CD46-202ENST00000322918 QRICH2Q9H0J4 1663 aa12.15□□□□□ -0.46
CD46-202ENST00000322918 ALKQ9UM73 1620 aa12.15□□□□□ -0.46
CD46-202ENST00000322918 PLEKHG5O94827 1062 aa12.15□□□□□ -0.47
CD46-202ENST00000322918 SPATA31D1Q6ZQQ2 1576 aa12.14□□□□□ -0.47
CD46-202ENST00000322918 SOX12O15370 315 aa12.14□□□□□ -0.47
CD46-202ENST00000322918 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
CD46-202ENST00000322918 SETBP1Q9Y6X0 1596 aa12.13□□□□□ -0.47
CD46-202ENST00000322918 CGNL1Q0VF96 1302 aa12.13□□□□□ -0.47
CD46-202ENST00000322918 MTHFSP49914 203 aa12.13□□□□□ -0.47
CD46-202ENST00000322918 RRP7AQ9Y3A4 280 aaKnown RBP12.13□□□□□ -0.47
CD46-202ENST00000322918 ZFYVE9O95405 1425 aa12.12□□□□□ -0.47
CD46-202ENST00000322918 TULP4Q9NRJ4 1543 aa12.12□□□□□ -0.47
CD46-202ENST00000322918 PTPRMP28827 1452 aa12.12□□□□□ -0.47
CD46-202ENST00000322918 A0A1W2PP64 1363 aa12.12□□□□□ -0.47
CD46-202ENST00000322918 SBNO2Q9Y2G9 1366 aa12.11□□□□□ -0.47
CD46-202ENST00000322918 TERF2IPQ9NYB0 399 aa12.11□□□□□ -0.47
CD46-202ENST00000322918 MYOM1P52179 1685 aa12.11□□□□□ -0.47
CD46-202ENST00000322918 APAF1O14727 1248 aa12.11□□□□□ -0.47
CD46-202ENST00000322918 HDGFL2Q7Z4V5 671 aaPredicted RBP12.11□□□□□ -0.47
CD46-202ENST00000322918 THEMISQ8N1K5 641 aaPredicted RBP12.11□□□□□ -0.47
CD46-202ENST00000322918 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
CD46-202ENST00000322918 LRPPRCP42704 1394 aaKnown RBP12.1□□□□□ -0.47
CD46-202ENST00000322918 U2SURPO15042 1029 aaKnown RBP12.1□□□□□ -0.47
CD46-202ENST00000322918 AMOTL2Q9Y2J4 779 aa12.1□□□□□ -0.47
CD46-202ENST00000322918 NUDCQ9Y266 331 aa12.1□□□□□ -0.47
CD46-202ENST00000322918 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
CD46-202ENST00000322918 ARHGEF28Q8N1W1 1705 aaKnown RBP12.09□□□□□ -0.47
CD46-202ENST00000322918 WASLO00401 505 aaPredicted RBP12.09□□□□□ -0.47
CD46-202ENST00000322918 NUDT16Q96DE0 195 aaKnown RBP12.09□□□□□ -0.47
CD46-202ENST00000322918 ROBO2Q9HCK4 1378 aa12.08□□□□□ -0.48
CD46-202ENST00000322918 FYB1O15117 783 aa12.08□□□□□ -0.48
CD46-202ENST00000322918 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
CD46-202ENST00000322918 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.486e-10■■■□□ 18.8
CD46-202ENST00000322918 ANKRD36BQ8N2N9 1353 aa12.07□□□□□ -0.48
CD46-202ENST00000322918 NME9Q86XW9 330 aa12.07□□□□□ -0.48
CD46-202ENST00000322918 PLIN1O60240 522 aa12.06□□□□□ -0.48
CD46-202ENST00000322918 B4GALNT3Q6L9W6 998 aa12.06□□□□□ -0.48
CD46-202ENST00000322918 ATAD2Q6PL18 1390 aa12.06□□□□□ -0.48
CD46-202ENST00000322918 C14orf37Q86TY3 774 aa12.05□□□□□ -0.48
CD46-202ENST00000322918 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
CD46-202ENST00000322918 KCNA6P17658 529 aa12.05□□□□□ -0.48
CD46-202ENST00000322918 MYO3AQ8NEV4 1616 aa12.05□□□□□ -0.48
CD46-202ENST00000322918 NUTM2GQ5VZR2 741 aa12.04□□□□□ -0.48
CD46-202ENST00000322918 CFAP53Q96M91 514 aa12.04□□□□□ -0.48
CD46-202ENST00000322918 FER1L4A9Z1Z3 1794 aa12.04□□□□□ -0.48
CD46-202ENST00000322918 C3P01024 1663 aa12.03□□□□□ -0.48
CD46-202ENST00000322918 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
CD46-202ENST00000322918 RRS1Q15050 365 aaKnown RBP12.03□□□□□ -0.48
CD46-202ENST00000322918 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
CD46-202ENST00000322918 PPIP5K1Q6PFW1 1433 aa12.03□□□□□ -0.48
CD46-202ENST00000322918 CCDC61Q9Y6R9 512 aa12.03□□□□□ -0.48
CD46-202ENST00000322918 RBM19Q9Y4C8 960 aaKnown RBP12.02□□□□□ -0.48
CD46-202ENST00000322918 DMRT2Q9Y5R5 561 aa12.02□□□□□ -0.48
CD46-202ENST00000322918 UBR1Q8IWV7 1749 aa12.02□□□□□ -0.49
CD46-202ENST00000322918 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
CD46-202ENST00000322918 ANKLE2Q86XL3 938 aa12.02□□□□□ -0.49
CD46-202ENST00000322918 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.49
CD46-202ENST00000322918 EMILIN1Q9Y6C2 1016 aa12.02□□□□□ -0.49
CD46-202ENST00000322918 NLRP1Q9C000 1473 aa12.01□□□□□ -0.49
CD46-202ENST00000322918 NPC1L1Q9UHC9 1359 aa12.01□□□□□ -0.49
CD46-202ENST00000322918 PLEKHG1Q9ULL1 1385 aa12.01□□□□□ -0.49
CD46-202ENST00000322918 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
CD46-202ENST00000322918 SMG6Q86US8 1419 aaKnown RBP12.01□□□□□ -0.49
CD46-202ENST00000322918 PTPRUQ92729 1446 aa12.01□□□□□ -0.49
CD46-202ENST00000322918 RIMS1Q86UR5 1692 aaKnown RBP12.01□□□□□ -0.49
CD46-202ENST00000322918 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
CD46-202ENST00000322918 NRXN3Q9Y4C0 1643 aa12□□□□□ -0.49
CD46-202ENST00000322918 HMOX1P09601 288 aa12□□□□□ -0.49
CD46-202ENST00000322918 HSPA2P54652 639 aa12□□□□□ -0.49
CD46-202ENST00000322918 TCP11L2Q8N4U5 519 aa12□□□□□ -0.49
CD46-202ENST00000322918 ACEP12821 1306 aa11.99□□□□□ -0.49
CD46-202ENST00000322918 GOLGA2Q08379 1002 aa11.99□□□□□ -0.49
CD46-202ENST00000322918 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
CD46-202ENST00000322918 CD163L1Q9NR16 1453 aa11.98□□□□□ -0.49
CD46-202ENST00000322918 PUS7Q96PZ0 661 aaKnown RBP11.98□□□□□ -0.49
CD46-202ENST00000322918 TBX22Q9Y458 520 aa11.98□□□□□ -0.49
CD46-202ENST00000322918 COG3Q96JB2 828 aa11.97□□□□□ -0.49
CD46-202ENST00000322918 XPCQ01831 940 aaPredicted RBP11.97□□□□□ -0.49
CD46-202ENST00000322918 BLMP54132 1417 aaPredicted RBP11.97□□□□□ -0.49
CD46-202ENST00000322918 LMOD2Q6P5Q4 547 aa11.96□□□□□ -0.49
CD46-202ENST00000322918 DIAPH1O60610 1272 aaKnown RBP11.95□□□□□ -0.5
CD46-202ENST00000322918 EXOC6Q8TAG9 804 aa11.95□□□□□ -0.5
CD46-202ENST00000322918 POLKQ9UBT6 870 aa11.95□□□□□ -0.5
CD46-202ENST00000322918 POLR3AO14802 1390 aaPredicted RBP11.95□□□□□ -0.5
CD46-202ENST00000322918 RUNDC1Q96C34 613 aa11.95□□□□□ -0.5
CD46-202ENST00000322918 RRP1P56182 461 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms