RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 ATAD2Q6PL18 1390 aa18.5■□□□□ 0.55
VAMP2-201ENST00000316509 PTPRMP28827 1452 aa18.5■□□□□ 0.55
VAMP2-201ENST00000316509 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
VAMP2-201ENST00000316509 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
VAMP2-201ENST00000316509 IRX6P78412 446 aaPredicted RBP18.48■□□□□ 0.55
VAMP2-201ENST00000316509 MORC1Q86VD1 984 aa18.48■□□□□ 0.55
VAMP2-201ENST00000316509 TSHZ2Q9NRE2 1034 aa18.48■□□□□ 0.55
VAMP2-201ENST00000316509 MLECQ14165 292 aa18.47■□□□□ 0.55
VAMP2-201ENST00000316509 POGKQ9P215 609 aa18.47■□□□□ 0.55
VAMP2-201ENST00000316509 RCAN3Q9UKA8 241 aa18.46■□□□□ 0.55
VAMP2-201ENST00000316509 SIRT1Q96EB6 747 aa18.45■□□□□ 0.54
VAMP2-201ENST00000316509 ABCC11Q96J66 1382 aa18.45■□□□□ 0.54
VAMP2-201ENST00000316509 STK26Q9P289 416 aa18.45■□□□□ 0.54
VAMP2-201ENST00000316509 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
VAMP2-201ENST00000316509 TNRQ92752 1358 aa18.43■□□□□ 0.54
VAMP2-201ENST00000316509 TERF2IPQ9NYB0 399 aa18.43■□□□□ 0.54
VAMP2-201ENST00000316509 SRPK2P78362 688 aaKnown RBP18.42■□□□□ 0.54
VAMP2-201ENST00000316509 CABP2Q9NPB3 220 aa18.42■□□□□ 0.54
VAMP2-201ENST00000316509 ZNF521Q96K83 1311 aa18.42■□□□□ 0.54
VAMP2-201ENST00000316509 RRP1P56182 461 aaKnown RBP18.41■□□□□ 0.54
VAMP2-201ENST00000316509 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
VAMP2-201ENST00000316509 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
VAMP2-201ENST00000316509 SALL2Q9Y467 1007 aaPredicted RBP18.41■□□□□ 0.54
VAMP2-201ENST00000316509 MED14O60244 1454 aa18.39■□□□□ 0.54
VAMP2-201ENST00000316509 GOLGA2Q08379 1002 aa18.39■□□□□ 0.53
VAMP2-201ENST00000316509 CDCA7LQ96GN5 454 aa18.38■□□□□ 0.53
VAMP2-201ENST00000316509 HDGFL2Q7Z4V5 671 aaPredicted RBP18.37■□□□□ 0.53
VAMP2-201ENST00000316509 SETD1AO15047 1707 aaKnown RBP18.37■□□□□ 0.53
VAMP2-201ENST00000316509 NLRP1Q9C000 1473 aa18.37■□□□□ 0.53
VAMP2-201ENST00000316509 MINK1Q8N4C8 1332 aaPredicted RBP18.37■□□□□ 0.53
VAMP2-201ENST00000316509 CDK19Q9BWU1 502 aa18.37■□□□□ 0.53
VAMP2-201ENST00000316509 SAFB2Q14151 953 aaKnown RBP eCLIP18.36■□□□□ 0.53
VAMP2-201ENST00000316509 FAM135BQ49AJ0 1406 aa18.36■□□□□ 0.53
VAMP2-201ENST00000316509 PLEKHH1Q9ULM0 1364 aa18.36■□□□□ 0.53
VAMP2-201ENST00000316509 A0A1W2PP64 1363 aa18.35■□□□□ 0.53
VAMP2-201ENST00000316509 TMEM2Q9UHN6 1383 aa18.35■□□□□ 0.53
VAMP2-201ENST00000316509 SENP3-EIF4A1A0A087X0R7 540 aa18.35■□□□□ 0.53
VAMP2-201ENST00000316509 TRMT2AQ8IZ69 625 aaKnown RBP18.35■□□□□ 0.53
VAMP2-201ENST00000316509 TECPR2O15040 1411 aa18.34■□□□□ 0.53
VAMP2-201ENST00000316509 SLFN5Q08AF3 891 aa18.34■□□□□ 0.53
VAMP2-201ENST00000316509 DUSP27Q5VZP5 1158 aa18.33■□□□□ 0.52
VAMP2-201ENST00000316509 MTHFSP49914 203 aa18.32■□□□□ 0.52
VAMP2-201ENST00000316509 B4GALNT3Q6L9W6 998 aa18.32■□□□□ 0.52
VAMP2-201ENST00000316509 RUNDC1Q96C34 613 aa18.32■□□□□ 0.52
VAMP2-201ENST00000316509 NRXN3Q9Y4C0 1643 aa18.32■□□□□ 0.52
VAMP2-201ENST00000316509 APAF1O14727 1248 aa18.32■□□□□ 0.52
VAMP2-201ENST00000316509 ATP7BP35670 1465 aa18.32■□□□□ 0.52
VAMP2-201ENST00000316509 E9PSI1 815 aa18.31■□□□□ 0.52
VAMP2-201ENST00000316509 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
VAMP2-201ENST00000316509 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
VAMP2-201ENST00000316509 CD163L1Q9NR16 1453 aa18.31■□□□□ 0.52
VAMP2-201ENST00000316509 UBR1Q8IWV7 1749 aa18.3■□□□□ 0.52
VAMP2-201ENST00000316509 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.29■□□□□ 0.52
VAMP2-201ENST00000316509 SHPRHQ149N8 1683 aa18.29■□□□□ 0.52
VAMP2-201ENST00000316509 PLEKHG1Q9ULL1 1385 aa18.29■□□□□ 0.52
VAMP2-201ENST00000316509 FYB1O15117 783 aa18.28■□□□□ 0.52
VAMP2-201ENST00000316509 CCDC146Q8IYE0 955 aa18.28■□□□□ 0.52
VAMP2-201ENST00000316509 METP08581 1390 aa18.28■□□□□ 0.52
VAMP2-201ENST00000316509 WASLO00401 505 aaPredicted RBP18.28■□□□□ 0.52
VAMP2-201ENST00000316509 CCDC27Q2M243 656 aa18.28■□□□□ 0.52
VAMP2-201ENST00000316509 MYT1Q01538 1121 aa18.27■□□□□ 0.52
VAMP2-201ENST00000316509 WAPLQ7Z5K2 1190 aa18.27■□□□□ 0.52
VAMP2-201ENST00000316509 CABP1Q9NZU7 370 aa18.27■□□□□ 0.52
VAMP2-201ENST00000316509 ANKRD26Q9UPS8 1709 aa18.27■□□□□ 0.52
VAMP2-201ENST00000316509 CPS1P31327 1500 aa18.27■□□□□ 0.52
VAMP2-201ENST00000316509 TNNT2P45379 298 aaPredicted RBP18.25■□□□□ 0.51
VAMP2-201ENST00000316509 WDR63Q8IWG1 891 aa18.25■□□□□ 0.51
VAMP2-201ENST00000316509 PNNQ9H307 717 aaKnown RBP18.25■□□□□ 0.51
VAMP2-201ENST00000316509 EID1Q9Y6B2 187 aa18.25■□□□□ 0.51
VAMP2-201ENST00000316509 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
VAMP2-201ENST00000316509 NKTRP30414 1462 aaKnown RBP18.24■□□□□ 0.51
VAMP2-201ENST00000316509 RBM19Q9Y4C8 960 aaKnown RBP18.24■□□□□ 0.51
VAMP2-201ENST00000316509 WWC1Q8IX03 1113 aa18.23■□□□□ 0.51
VAMP2-201ENST00000316509 SENP3Q9H4L4 574 aaPredicted RBP18.23■□□□□ 0.51
VAMP2-201ENST00000316509 CPSF1Q10570 1443 aaKnown RBP18.23■□□□□ 0.51
VAMP2-201ENST00000316509 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
VAMP2-201ENST00000316509 GGNBP2Q9H3C7 697 aa18.23■□□□□ 0.51
VAMP2-201ENST00000316509 SLIT1O75093 1534 aa18.22■□□□□ 0.51
VAMP2-201ENST00000316509 EXOC6Q8TAG9 804 aa18.22■□□□□ 0.51
VAMP2-201ENST00000316509 ZNF692Q9BU19 519 aaPredicted RBP18.22■□□□□ 0.51
VAMP2-201ENST00000316509 IQSEC2Q5JU85 1478 aa18.22■□□□□ 0.51
VAMP2-201ENST00000316509 ARHGAP23Q9P227 1491 aa18.22■□□□□ 0.51
VAMP2-201ENST00000316509 PNPLA6Q8IY17 1366 aa18.22■□□□□ 0.51
VAMP2-201ENST00000316509 TXNDC2Q86VQ3 553 aa18.21■□□□□ 0.51
VAMP2-201ENST00000316509 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.51
VAMP2-201ENST00000316509 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.51
VAMP2-201ENST00000316509 TCP11L2Q8N4U5 519 aa18.21■□□□□ 0.51
VAMP2-201ENST00000316509 THEMISQ8N1K5 641 aaPredicted RBP18.2■□□□□ 0.5
VAMP2-201ENST00000316509 TBX22Q9Y458 520 aa18.2■□□□□ 0.5
VAMP2-201ENST00000316509 FER1L4A9Z1Z3 1794 aa18.19■□□□□ 0.5
VAMP2-201ENST00000316509 NUDT16Q96DE0 195 aaKnown RBP18.19■□□□□ 0.5
VAMP2-201ENST00000316509 CDC42BPGQ6DT37 1551 aa18.18■□□□□ 0.5
VAMP2-201ENST00000316509 PPIP5K1Q6PFW1 1433 aa18.18■□□□□ 0.5
VAMP2-201ENST00000316509 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
VAMP2-201ENST00000316509 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
VAMP2-201ENST00000316509 KIF20BQ96Q89 1820 aa18.18■□□□□ 0.5
VAMP2-201ENST00000316509 C3P01024 1663 aa18.18■□□□□ 0.5
VAMP2-201ENST00000316509 COL3A1P02461 1466 aaPredicted RBP18.18■□□□□ 0.5
VAMP2-201ENST00000316509 ADGRB2O60241 1585 aa18.18■□□□□ 0.5
VAMP2-201ENST00000316509 LTKP29376 864 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms