RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 CCDC7Q96M83 1385 aa12.19□□□□□ -0.46
HDLBP-201ENST00000310931 PUS7Q96PZ0 661 aaKnown RBP12.19□□□□□ -0.46
HDLBP-201ENST00000310931 TMEM2Q9UHN6 1383 aa12.19□□□□□ -0.46
HDLBP-201ENST00000310931 C3P01024 1663 aa12.19□□□□□ -0.46
HDLBP-201ENST00000310931 SBNO2Q9Y2G9 1366 aa12.18□□□□□ -0.46
HDLBP-201ENST00000310931 GZF1Q9H116 711 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-201ENST00000310931 RIMS1Q86UR5 1692 aaKnown RBP12.18□□□□□ -0.46
HDLBP-201ENST00000310931 ZBTB7CA1YPR0 619 aa12.18□□□□□ -0.46
HDLBP-201ENST00000310931 RGS3P49796 1198 aa12.18□□□□□ -0.46
HDLBP-201ENST00000310931 ADGRF5Q8IZF2 1346 aa12.18□□□□□ -0.46
HDLBP-201ENST00000310931 POLR1AO95602 1720 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-201ENST00000310931 USP35Q9P2H5 1018 aa12.17□□□□□ -0.46
HDLBP-201ENST00000310931 CFAP65Q6ZU64 1925 aaKnown RBP12.17□□□□□ -0.46
HDLBP-201ENST00000310931 CENPJQ9HC77 1338 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-201ENST00000310931 PLEKHG1Q9ULL1 1385 aa12.17□□□□□ -0.46
HDLBP-201ENST00000310931 SENP3-EIF4A1A0A087X0R7 540 aa12.16□□□□□ -0.46
HDLBP-201ENST00000310931 DIP2AQ14689 1571 aa12.16□□□□□ -0.46
HDLBP-201ENST00000310931 KTN1Q86UP2 1357 aaKnown RBP12.16□□□□□ -0.46
HDLBP-201ENST00000310931 SIRT1Q96EB6 747 aa12.16□□□□□ -0.46
HDLBP-201ENST00000310931 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
HDLBP-201ENST00000310931 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
HDLBP-201ENST00000310931 SLIT1O75093 1534 aa12.15□□□□□ -0.46
HDLBP-201ENST00000310931 CFAP70Q5T0N1 1121 aa12.15□□□□□ -0.46
HDLBP-201ENST00000310931 PTMSP20962 102 aa12.15□□□□□ -0.46
HDLBP-201ENST00000310931 GSE1Q14687 1217 aa12.14□□□□□ -0.47
HDLBP-201ENST00000310931 TPRNQ4KMQ1 711 aa12.14□□□□□ -0.47
HDLBP-201ENST00000310931 NINLQ9Y2I6 1382 aa12.14□□□□□ -0.47
HDLBP-201ENST00000310931 ANKLE2Q86XL3 938 aa12.14□□□□□ -0.47
HDLBP-201ENST00000310931 POGKQ9P215 609 aa12.14□□□□□ -0.47
HDLBP-201ENST00000310931 WASHC2AQ641Q2 1341 aa12.14□□□□□ -0.47
HDLBP-201ENST00000310931 DLC1Q96QB1 1528 aa12.14□□□□□ -0.47
HDLBP-201ENST00000310931 GOLGA6L3A6NEY3 463 aa12.14□□□□□ -0.47
HDLBP-201ENST00000310931 MYO3AQ8NEV4 1616 aa12.14□□□□□ -0.47
HDLBP-201ENST00000310931 EVC2Q86UK5 1308 aa12.13□□□□□ -0.47
HDLBP-201ENST00000310931 UBR1Q8IWV7 1749 aa12.13□□□□□ -0.47
HDLBP-201ENST00000310931 NBPF1Q3BBV0 1214 aa12.13□□□□□ -0.47
HDLBP-201ENST00000310931 TXNDC2Q86VQ3 553 aa12.13□□□□□ -0.47
HDLBP-201ENST00000310931 PIK3R4Q99570 1358 aa12.13□□□□□ -0.47
HDLBP-201ENST00000310931 MYH16Q9H6N6 1097 aa12.13□□□□□ -0.47
HDLBP-201ENST00000310931 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-201ENST00000310931 LRPPRCP42704 1394 aaKnown RBP12.13□□□□□ -0.47
HDLBP-201ENST00000310931 IL27Q8NEV9 243 aa12.13□□□□□ -0.47
HDLBP-201ENST00000310931 ARHGAP23Q9P227 1491 aa12.12□□□□□ -0.47
HDLBP-201ENST00000310931 SETD1BQ9UPS6 1966 aaKnown RBP12.12□□□□□ -0.47
HDLBP-201ENST00000310931 ZNF142P52746 1687 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-201ENST00000310931 KIF7Q2M1P5 1343 aa12.12□□□□□ -0.47
HDLBP-201ENST00000310931 APPP05067 770 aa12.12□□□□□ -0.47
HDLBP-201ENST00000310931 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
HDLBP-201ENST00000310931 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
HDLBP-201ENST00000310931 YTHDC2Q9H6S0 1430 aaKnown RBP12.1□□□□□ -0.47
HDLBP-201ENST00000310931 TBX22Q9Y458 520 aa12.1□□□□□ -0.47
HDLBP-201ENST00000310931 PTPRMP28827 1452 aa12.1□□□□□ -0.47
HDLBP-201ENST00000310931 ABCC11Q96J66 1382 aa12.1□□□□□ -0.47
HDLBP-201ENST00000310931 FANCIQ9NVI1 1328 aa12.1□□□□□ -0.47
HDLBP-201ENST00000310931 WDR43Q15061 677 aaKnown RBP eCLIP12.09□□□□□ -0.477e-6■■□□□ 14.2
HDLBP-201ENST00000310931 FAM135BQ49AJ0 1406 aa12.09□□□□□ -0.47
HDLBP-201ENST00000310931 CEBPAP49715 358 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-201ENST00000310931 SLKQ9H2G2 1235 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-201ENST00000310931 KIAA2012Q0VF49 1180 aa12.09□□□□□ -0.47
HDLBP-201ENST00000310931 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
HDLBP-201ENST00000310931 ADGRB1O14514 1584 aa12.08□□□□□ -0.48
HDLBP-201ENST00000310931 PLPPR3Q6T4P5 718 aa12.08□□□□□ -0.48
HDLBP-201ENST00000310931 FAM13BQ9NYF5 915 aa12.08□□□□□ -0.48
HDLBP-201ENST00000310931 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
HDLBP-201ENST00000310931 TRAK1Q9UPV9 953 aa12.07□□□□□ -0.48
HDLBP-201ENST00000310931 RALBP1Q15311 655 aa12.07□□□□□ -0.48
HDLBP-201ENST00000310931 MYO5BQ9ULV0 1848 aa12.07□□□□□ -0.48
HDLBP-201ENST00000310931 HSP90AB1P08238 724 aaKnown RBP12.06□□□□□ -0.48
HDLBP-201ENST00000310931 TESK2Q96S53 571 aa12.05□□□□□ -0.48
HDLBP-201ENST00000310931 KNSTRNQ9Y448 316 aa12.05□□□□□ -0.48
HDLBP-201ENST00000310931 TECPR2O15040 1411 aa12.05□□□□□ -0.48
HDLBP-201ENST00000310931 KNDC1Q76NI1 1749 aa12.05□□□□□ -0.48
HDLBP-201ENST00000310931 PDE4CQ08493 712 aa12.05□□□□□ -0.48
HDLBP-201ENST00000310931 NUTM2DQ5VT03 806 aaPredicted RBP12.04□□□□□ -0.48
HDLBP-201ENST00000310931 ZNF771Q7L3S4 317 aaPredicted RBP12.04□□□□□ -0.48
HDLBP-201ENST00000310931 ZRSR1Q15695 479 aaKnown RBP12.04□□□□□ -0.48
HDLBP-201ENST00000310931 MSH5O43196 834 aa12.04□□□□□ -0.48
HDLBP-201ENST00000310931 TERF2IPQ9NYB0 399 aa12.03□□□□□ -0.48
HDLBP-201ENST00000310931 NRDCO43847 1150 aa12.03□□□□□ -0.48
HDLBP-201ENST00000310931 STK26Q9P289 416 aa12.03□□□□□ -0.48
HDLBP-201ENST00000310931 QRICH2Q9H0J4 1663 aa12.03□□□□□ -0.48
HDLBP-201ENST00000310931 TMEM132EQ6IEE7 984 aa12.02□□□□□ -0.48
HDLBP-201ENST00000310931 CPS1P31327 1500 aa12.02□□□□□ -0.49
HDLBP-201ENST00000310931 HDGFL2Q7Z4V5 671 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-201ENST00000310931 PTCH1Q13635 1447 aa12.02□□□□□ -0.49
HDLBP-201ENST00000310931 TCERG1O14776 1098 aaKnown RBP12.01□□□□□ -0.49
HDLBP-201ENST00000310931 HSCBQ8IWL3 235 aa12.01□□□□□ -0.49
HDLBP-201ENST00000310931 NPHP4O75161 1426 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-201ENST00000310931 ARHGEF28Q8N1W1 1705 aaKnown RBP12.01□□□□□ -0.49
HDLBP-201ENST00000310931 NPC1L1Q9UHC9 1359 aa12.01□□□□□ -0.49
HDLBP-201ENST00000310931 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
HDLBP-201ENST00000310931 PRAM1Q96QH2 718 aa12.01□□□□□ -0.49
HDLBP-201ENST00000310931 NSD2O96028 1365 aa12□□□□□ -0.49
HDLBP-201ENST00000310931 DISP3Q9P2K9 1392 aa12□□□□□ -0.49
HDLBP-201ENST00000310931 DMRT2Q9Y5R5 561 aa11.99□□□□□ -0.49
HDLBP-201ENST00000310931 MED14O60244 1454 aa11.99□□□□□ -0.49
HDLBP-201ENST00000310931 CGNL1Q0VF96 1302 aa11.99□□□□□ -0.49
HDLBP-201ENST00000310931 BRPF3Q9ULD4 1205 aa11.99□□□□□ -0.49
HDLBP-201ENST00000310931 ADAMTS13Q76LX8 1427 aa11.99□□□□□ -0.49
HDLBP-201ENST00000310931 CALRP27797 417 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms