RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 MSH6P52701 1360 aa18.24■□□□□ 0.51
APTX-201ENST00000309615 EIF3AQ14152 1382 aaKnown RBP18.24■□□□□ 0.51
APTX-201ENST00000309615 IQSEC2Q5JU85 1478 aa18.24■□□□□ 0.51
APTX-201ENST00000309615 HIRIP3Q9BW71 556 aaPredicted RBP18.23■□□□□ 0.51
APTX-201ENST00000309615 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
APTX-201ENST00000309615 USP47Q96K76 1375 aa18.23■□□□□ 0.51
APTX-201ENST00000309615 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
APTX-201ENST00000309615 ST20-MTHFSA0A0A6YYL1 179 aa18.2■□□□□ 0.5
APTX-201ENST00000309615 ATF3P18847 181 aa18.2■□□□□ 0.5
APTX-201ENST00000309615 QRICH2Q9H0J4 1663 aa18.19■□□□□ 0.5
APTX-201ENST00000309615 DCCP43146 1447 aa18.19■□□□□ 0.5
APTX-201ENST00000309615 CADPS2Q86UW7 1296 aa18.18■□□□□ 0.5
APTX-201ENST00000309615 CDC42BPGQ6DT37 1551 aa18.17■□□□□ 0.5
APTX-201ENST00000309615 UBAP1LF5GYI3 381 aa18.17■□□□□ 0.5
APTX-201ENST00000309615 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
APTX-201ENST00000309615 EIF4G2P78344 907 aaKnown RBP eCLIP18.16■□□□□ 0.5
APTX-201ENST00000309615 WASLO00401 505 aaPredicted RBP18.15■□□□□ 0.5
APTX-201ENST00000309615 TOM1O60784 492 aa18.15■□□□□ 0.5
APTX-201ENST00000309615 TESK2Q96S53 571 aa18.15■□□□□ 0.5
APTX-201ENST00000309615 NUTM2FA1L443 756 aa18.14■□□□□ 0.49
APTX-201ENST00000309615 HSPA5P11021 654 aaKnown RBP18.14■□□□□ 0.49
APTX-201ENST00000309615 SLAIN2Q9P270 581 aa18.14■□□□□ 0.49
APTX-201ENST00000309615 MST1RQ04912 1400 aa18.14■□□□□ 0.49
APTX-201ENST00000309615 SBNO2Q9Y2G9 1366 aa18.13■□□□□ 0.49
APTX-201ENST00000309615 CDK19Q9BWU1 502 aa18.13■□□□□ 0.49
APTX-201ENST00000309615 TULP4Q9NRJ4 1543 aa18.12■□□□□ 0.49
APTX-201ENST00000309615 FMN2Q9NZ56 1722 aa18.11■□□□□ 0.49
APTX-201ENST00000309615 PIP4K2BP78356 416 aa18.11■□□□□ 0.49
APTX-201ENST00000309615 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
APTX-201ENST00000309615 C1orf167Q5SNV9 1468 aa18.1■□□□□ 0.49
APTX-201ENST00000309615 SRPK2P78362 688 aaKnown RBP18.09■□□□□ 0.49
APTX-201ENST00000309615 CABP2Q9NPB3 220 aa18.09■□□□□ 0.49
APTX-201ENST00000309615 PRR36Q9H6K5 1346 aa18.09■□□□□ 0.49
APTX-201ENST00000309615 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
APTX-201ENST00000309615 USP32Q8NFA0 1604 aa18.08■□□□□ 0.48
APTX-201ENST00000309615 ORAI2Q96SN7 254 aa18.07■□□□□ 0.48
APTX-201ENST00000309615 DISP3Q9P2K9 1392 aa18.07■□□□□ 0.48
APTX-201ENST00000309615 NUDT16Q96DE0 195 aaKnown RBP18.07■□□□□ 0.48
APTX-201ENST00000309615 ANKARQ7Z5J8 1434 aa18.06■□□□□ 0.48
APTX-201ENST00000309615 ESCO1Q5FWF5 840 aa18.06■□□□□ 0.48
APTX-201ENST00000309615 BRINP3Q76B58 766 aa18.06■□□□□ 0.48
APTX-201ENST00000309615 ATP7BP35670 1465 aa18.06■□□□□ 0.48
APTX-201ENST00000309615 TMF1P82094 1093 aa18.05■□□□□ 0.48
APTX-201ENST00000309615 SLC24A1O60721 1099 aa18.05■□□□□ 0.48
APTX-201ENST00000309615 ROBO1Q9Y6N7 1651 aa18.04■□□□□ 0.48
APTX-201ENST00000309615 RGPD8O14715 1765 aaPredicted RBP18.04■□□□□ 0.48
APTX-201ENST00000309615 FBXO41Q8TF61 875 aa18.03■□□□□ 0.48
APTX-201ENST00000309615 CCDC61Q9Y6R9 512 aa18.03■□□□□ 0.48
APTX-201ENST00000309615 PMFBP1Q8TBY8 1022 aa18.01■□□□□ 0.47
APTX-201ENST00000309615 PHF8Q9UPP1 1060 aa18.01■□□□□ 0.47
APTX-201ENST00000309615 ATAD2Q6PL18 1390 aa18■□□□□ 0.47
APTX-201ENST00000309615 C11orf95C9JLR9 678 aaPredicted RBP18■□□□□ 0.47
APTX-201ENST00000309615 DDX17Q92841 729 aaKnown RBP18■□□□□ 0.47
APTX-201ENST00000309615 PPIP5K1Q6PFW1 1433 aa18■□□□□ 0.47
APTX-201ENST00000309615 TOPAZ1Q8N9V7 1692 aa17.99■□□□□ 0.47
APTX-201ENST00000309615 FOXO3O43524 673 aa17.99■□□□□ 0.47
APTX-201ENST00000309615 PUS7Q96PZ0 661 aaKnown RBP17.99■□□□□ 0.47
APTX-201ENST00000309615 CABP1Q9NZU7 370 aa17.99■□□□□ 0.47
APTX-201ENST00000309615 CDCA8Q53HL2 280 aa17.98■□□□□ 0.47
APTX-201ENST00000309615 ITSN1Q15811 1721 aa17.98■□□□□ 0.47
APTX-201ENST00000309615 PLEKHG3A1L390 1219 aa17.97■□□□□ 0.47
APTX-201ENST00000309615 KIF1AQ12756 1690 aa17.96■□□□□ 0.47
APTX-201ENST00000309615 NGDNQ8NEJ9 315 aaKnown RBP17.96■□□□□ 0.47
APTX-201ENST00000309615 TMC1Q8TDI8 760 aa17.96■□□□□ 0.47
APTX-201ENST00000309615 POLR3GLQ9BT43 218 aa17.96■□□□□ 0.47
APTX-201ENST00000309615 XPCQ01831 940 aaPredicted RBP17.95■□□□□ 0.46
APTX-201ENST00000309615 SLC12A5Q9H2X9 1139 aa17.95■□□□□ 0.46
APTX-201ENST00000309615 ACEP12821 1306 aa17.95■□□□□ 0.46
APTX-201ENST00000309615 NHSL1Q5SYE7 1610 aa17.94■□□□□ 0.46
APTX-201ENST00000309615 NPHP3Q7Z494 1330 aa17.94■□□□□ 0.46
APTX-201ENST00000309615 POLR3AO14802 1390 aaPredicted RBP17.94■□□□□ 0.46
APTX-201ENST00000309615 HSPA1LP34931 641 aa17.94■□□□□ 0.46
APTX-201ENST00000309615 AHDC1Q5TGY3 1603 aaPredicted RBP17.94■□□□□ 0.46
APTX-201ENST00000309615 KIF7Q2M1P5 1343 aa17.94■□□□□ 0.46
APTX-201ENST00000309615 PSME1Q06323 249 aa17.92■□□□□ 0.46
APTX-201ENST00000309615 PXDNQ92626 1479 aa17.92■□□□□ 0.46
APTX-201ENST00000309615 KRT28Q7Z3Y7 464 aa17.91■□□□□ 0.46
APTX-201ENST00000309615 SOS2Q07890 1332 aaPredicted RBP17.91■□□□□ 0.46
APTX-201ENST00000309615 PHLPP1O60346 1717 aa17.91■□□□□ 0.46
APTX-201ENST00000309615 WASHC2AQ641Q2 1341 aa17.9■□□□□ 0.46
APTX-201ENST00000309615 NINLQ9Y2I6 1382 aa17.9■□□□□ 0.46
APTX-201ENST00000309615 CD163L1Q9NR16 1453 aa17.9■□□□□ 0.46
APTX-201ENST00000309615 ILDR1Q86SU0 546 aaPredicted RBP17.89■□□□□ 0.45
APTX-201ENST00000309615 COL16A1Q07092 1604 aaPredicted RBP17.89■□□□□ 0.45
APTX-201ENST00000309615 MYOM1P52179 1685 aa17.89■□□□□ 0.45
APTX-201ENST00000309615 CCDC7Q96M83 1385 aa17.89■□□□□ 0.45
APTX-201ENST00000309615 CPSF1Q10570 1443 aaKnown RBP17.89■□□□□ 0.45
APTX-201ENST00000309615 A0A1W2PP64 1363 aa17.88■□□□□ 0.45
APTX-201ENST00000309615 ZNF692Q9BU19 519 aaPredicted RBP17.87■□□□□ 0.45
APTX-201ENST00000309615 TERF2IPQ9NYB0 399 aa17.87■□□□□ 0.45
APTX-201ENST00000309615 USP6P35125 1406 aa17.86■□□□□ 0.45
APTX-201ENST00000309615 KTN1Q86UP2 1357 aaKnown RBP17.86■□□□□ 0.45
APTX-201ENST00000309615 HDGFL2Q7Z4V5 671 aaPredicted RBP17.86■□□□□ 0.45
APTX-201ENST00000309615 ANKRD36BQ8N2N9 1353 aa17.85■□□□□ 0.45
APTX-201ENST00000309615 PAK3O75914 559 aaPredicted RBP17.85■□□□□ 0.45
APTX-201ENST00000309615 LRRC59Q96AG4 307 aaKnown RBP17.85■□□□□ 0.45
APTX-201ENST00000309615 AKAP12Q02952 1782 aa17.85■□□□□ 0.45
APTX-201ENST00000309615 SBNO1A3KN83 1393 aa17.84■□□□□ 0.45
APTX-201ENST00000309615 TRPM3Q9HCF6 1732 aaPredicted RBP17.84■□□□□ 0.45
APTX-201ENST00000309615 SPATA31A3Q5VYP0 1347 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms