RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 NKTRP30414 1462 aaKnown RBP23.95■■□□□ 1.42
NDUFA11-201ENST00000308961 ZNF316A6NFI3 1004 aaPredicted RBP23.95■■□□□ 1.42
NDUFA11-201ENST00000308961 SBNO2Q9Y2G9 1366 aa23.94■■□□□ 1.42
NDUFA11-201ENST00000308961 DISP3Q9P2K9 1392 aa23.93■■□□□ 1.42
NDUFA11-201ENST00000308961 TMEM94Q12767 1356 aa23.91■■□□□ 1.42
NDUFA11-201ENST00000308961 LRRC7Q96NW7 1537 aa23.91■■□□□ 1.42
NDUFA11-201ENST00000308961 TMF1P82094 1093 aa23.9■■□□□ 1.42
NDUFA11-201ENST00000308961 LTBP4Q8N2S1 1624 aa23.9■■□□□ 1.42
NDUFA11-201ENST00000308961 TULP4Q9NRJ4 1543 aa23.89■■□□□ 1.42
NDUFA11-201ENST00000308961 CDK19Q9BWU1 502 aa23.88■■□□□ 1.41
NDUFA11-201ENST00000308961 KIF7Q2M1P5 1343 aa23.87■■□□□ 1.41
NDUFA11-201ENST00000308961 WASLO00401 505 aaPredicted RBP23.87■■□□□ 1.41
NDUFA11-201ENST00000308961 WASHC2AQ641Q2 1341 aa23.86■■□□□ 1.41
NDUFA11-201ENST00000308961 EVC2Q86UK5 1308 aa23.86■■□□□ 1.41
NDUFA11-201ENST00000308961 CABP2Q9NPB3 220 aa23.86■■□□□ 1.41
NDUFA11-201ENST00000308961 XIRP1Q702N8 1843 aaKnown RBP23.86■■□□□ 1.41
NDUFA11-201ENST00000308961 ADGRL3Q9HAR2 1447 aa23.85■■□□□ 1.41
NDUFA11-201ENST00000308961 NALCNQ8IZF0 1738 aa23.85■■□□□ 1.41
NDUFA11-201ENST00000308961 C14orf37Q86TY3 774 aa23.85■■□□□ 1.41
NDUFA11-201ENST00000308961 CCDC7Q96M83 1385 aa23.85■■□□□ 1.41
NDUFA11-201ENST00000308961 ADGRB2O60241 1585 aa23.84■■□□□ 1.41
NDUFA11-201ENST00000308961 SLC24A1O60721 1099 aa23.84■■□□□ 1.41
NDUFA11-201ENST00000308961 NCOA3Q9Y6Q9 1424 aa23.84■■□□□ 1.41
NDUFA11-201ENST00000308961 POLR3GLQ9BT43 218 aa23.83■■□□□ 1.41
NDUFA11-201ENST00000308961 C19orf44Q9H6X5 657 aa23.82■■□□□ 1.4
NDUFA11-201ENST00000308961 SRPK2P78362 688 aaKnown RBP23.81■■□□□ 1.4
NDUFA11-201ENST00000308961 NUTM2FA1L443 756 aa23.8■■□□□ 1.4
NDUFA11-201ENST00000308961 PRR36Q9H6K5 1346 aa23.8■■□□□ 1.4
NDUFA11-201ENST00000308961 CDCA8Q53HL2 280 aa23.78■■□□□ 1.4
NDUFA11-201ENST00000308961 PUS7Q96PZ0 661 aaKnown RBP23.78■■□□□ 1.4
NDUFA11-201ENST00000308961 NUDT16Q96DE0 195 aaKnown RBP23.77■■□□□ 1.4
NDUFA11-201ENST00000308961 CDC42BPGQ6DT37 1551 aa23.77■■□□□ 1.4
NDUFA11-201ENST00000308961 MSH6P52701 1360 aa23.75■■□□□ 1.39
NDUFA11-201ENST00000308961 FMN2Q9NZ56 1722 aa23.74■■□□□ 1.39
NDUFA11-201ENST00000308961 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
NDUFA11-201ENST00000308961 SLC12A5Q9H2X9 1139 aa23.73■■□□□ 1.39
NDUFA11-201ENST00000308961 ATF3P18847 181 aa23.72■■□□□ 1.39
NDUFA11-201ENST00000308961 ATP7BP35670 1465 aa23.72■■□□□ 1.39
NDUFA11-201ENST00000308961 ATAD2Q6PL18 1390 aa23.71■■□□□ 1.39
NDUFA11-201ENST00000308961 DDX10Q13206 875 aaKnown RBP23.71■■□□□ 1.39
NDUFA11-201ENST00000308961 DCCP43146 1447 aa23.7■■□□□ 1.38
NDUFA11-201ENST00000308961 CADPS2Q86UW7 1296 aa23.7■■□□□ 1.38
NDUFA11-201ENST00000308961 TMC1Q8TDI8 760 aa23.7■■□□□ 1.38
NDUFA11-201ENST00000308961 CABP1Q9NZU7 370 aa23.7■■□□□ 1.38
NDUFA11-201ENST00000308961 CCDC61Q9Y6R9 512 aa23.7■■□□□ 1.38
NDUFA11-201ENST00000308961 RGPD8O14715 1765 aaPredicted RBP23.69■■□□□ 1.38
NDUFA11-201ENST00000308961 MST1RQ04912 1400 aa23.68■■□□□ 1.38
NDUFA11-201ENST00000308961 ANKARQ7Z5J8 1434 aa23.68■■□□□ 1.38
NDUFA11-201ENST00000308961 MYOM1P52179 1685 aa23.68■■□□□ 1.38
NDUFA11-201ENST00000308961 C1orf167Q5SNV9 1468 aa23.67■■□□□ 1.38
NDUFA11-201ENST00000308961 PPIP5K1Q6PFW1 1433 aa23.67■■□□□ 1.38
NDUFA11-201ENST00000308961 ORAI2Q96SN7 254 aa23.66■■□□□ 1.38
NDUFA11-201ENST00000308961 PLEKHG3A1L390 1219 aa23.65■■□□□ 1.38
NDUFA11-201ENST00000308961 CERKQ8TCT0 537 aa23.65■■□□□ 1.38
NDUFA11-201ENST00000308961 PANK3Q9H999 370 aa23.65■■□□□ 1.38
NDUFA11-201ENST00000308961 TOPAZ1Q8N9V7 1692 aa23.64■■□□□ 1.38
NDUFA11-201ENST00000308961 PMFBP1Q8TBY8 1022 aa23.64■■□□□ 1.37
NDUFA11-201ENST00000308961 SLAIN2Q9P270 581 aa23.64■■□□□ 1.37
NDUFA11-201ENST00000308961 ESCO1Q5FWF5 840 aa23.63■■□□□ 1.37
NDUFA11-201ENST00000308961 CD163L1Q9NR16 1453 aa23.62■■□□□ 1.37
NDUFA11-201ENST00000308961 CARD14Q9BXL6 1004 aa23.61■■□□□ 1.37
NDUFA11-201ENST00000308961 PHF8Q9UPP1 1060 aa23.61■■□□□ 1.37
NDUFA11-201ENST00000308961 NINLQ9Y2I6 1382 aa23.6■■□□□ 1.37
NDUFA11-201ENST00000308961 ACEP12821 1306 aa23.59■■□□□ 1.37
NDUFA11-201ENST00000308961 CPSF1Q10570 1443 aaKnown RBP23.58■■□□□ 1.36
NDUFA11-201ENST00000308961 A0A1W2PP64 1363 aa23.57■■□□□ 1.36
NDUFA11-201ENST00000308961 ANKRD36BQ8N2N9 1353 aa23.57■■□□□ 1.36
NDUFA11-201ENST00000308961 PER1O15534 1290 aaPredicted RBP23.57■■□□□ 1.36
NDUFA11-201ENST00000308961 ITSN1Q15811 1721 aa23.56■■□□□ 1.36
NDUFA11-201ENST00000308961 BRINP3Q76B58 766 aa23.56■■□□□ 1.36
NDUFA11-201ENST00000308961 NGDNQ8NEJ9 315 aaKnown RBP23.56■■□□□ 1.36
NDUFA11-201ENST00000308961 TERF2IPQ9NYB0 399 aa23.56■■□□□ 1.36
NDUFA11-201ENST00000308961 IQSEC2Q5JU85 1478 aa23.56■■□□□ 1.36
NDUFA11-201ENST00000308961 POLR3AO14802 1390 aaPredicted RBP23.55■■□□□ 1.36
NDUFA11-201ENST00000308961 FOXO3O43524 673 aa23.54■■□□□ 1.36
NDUFA11-201ENST00000308961 HDGFL2Q7Z4V5 671 aaPredicted RBP23.54■■□□□ 1.36
NDUFA11-201ENST00000308961 DDX17Q92841 729 aaKnown RBP23.54■■□□□ 1.36
NDUFA11-201ENST00000308961 ZNF692Q9BU19 519 aaPredicted RBP23.52■■□□□ 1.36
NDUFA11-201ENST00000308961 KTN1Q86UP2 1357 aaKnown RBP23.52■■□□□ 1.36
NDUFA11-201ENST00000308961 AKAP12Q02952 1782 aa23.51■■□□□ 1.35
NDUFA11-201ENST00000308961 UBAP1LF5GYI3 381 aa23.51■■□□□ 1.35
NDUFA11-201ENST00000308961 TOM1O60784 492 aa23.51■■□□□ 1.35
NDUFA11-201ENST00000308961 XPCQ01831 940 aaPredicted RBP23.5■■□□□ 1.35
NDUFA11-201ENST00000308961 NSD3Q9BZ95 1437 aa23.5■■□□□ 1.35
NDUFA11-201ENST00000308961 KIF1AQ12756 1690 aa23.48■■□□□ 1.35
NDUFA11-201ENST00000308961 PSME1Q06323 249 aa23.48■■□□□ 1.35
NDUFA11-201ENST00000308961 USP6P35125 1406 aa23.48■■□□□ 1.35
NDUFA11-201ENST00000308961 SSH2Q76I76 1423 aa23.48■■□□□ 1.35
NDUFA11-201ENST00000308961 PIP4K2BP78356 416 aa23.47■■□□□ 1.35
NDUFA11-201ENST00000308961 KRT28Q7Z3Y7 464 aa23.47■■□□□ 1.35
NDUFA11-201ENST00000308961 DIEXFQ68CQ4 756 aaKnown RBP23.46■■□□□ 1.35
NDUFA11-201ENST00000308961 MON2Q7Z3U7 1717 aa23.46■■□□□ 1.35
NDUFA11-201ENST00000308961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.46■■□□□ 1.35
NDUFA11-201ENST00000308961 KNSTRNQ9Y448 316 aa23.46■■□□□ 1.35
NDUFA11-201ENST00000308961 TTC21BQ7Z4L5 1316 aa23.45■■□□□ 1.34
NDUFA11-201ENST00000308961 AMER1Q5JTC6 1135 aaPredicted RBP23.45■■□□□ 1.34
NDUFA11-201ENST00000308961 EDC4Q6P2E9 1401 aaKnown RBP23.44■■□□□ 1.34
NDUFA11-201ENST00000308961 ROBO1Q9Y6N7 1651 aa23.44■■□□□ 1.34
NDUFA11-201ENST00000308961 CNGB1Q14028 1251 aaPredicted RBP23.43■■□□□ 1.34
NDUFA11-201ENST00000308961 ZRANB1Q9UGI0 708 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms