RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 SETQ01105 290 aaPredicted RBP20.3■□□□□ 0.84
PDS5A-201ENST00000303538 PDE3BQ13370 1112 aa20.3■□□□□ 0.84
PDS5A-201ENST00000303538 FAM161AQ3B820 660 aa20.3■□□□□ 0.84
PDS5A-201ENST00000303538 REC8O95072 547 aa20.29■□□□□ 0.84
PDS5A-201ENST00000303538 ATP2B1P20020 1258 aa20.29■□□□□ 0.84
PDS5A-201ENST00000303538 HSP90AB2PQ58FF8 381 aa20.29■□□□□ 0.84
PDS5A-201ENST00000303538 OFD1O75665 1012 aa20.28■□□□□ 0.84
PDS5A-201ENST00000303538 RRP12Q5JTH9 1297 aaKnown RBP20.28■□□□□ 0.84
PDS5A-201ENST00000303538 ABTB2Q8N961 1025 aa20.28■□□□□ 0.84
PDS5A-201ENST00000303538 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
PDS5A-201ENST00000303538 KIF6Q6ZMV9 814 aa20.27■□□□□ 0.84
PDS5A-201ENST00000303538 XPCQ01831 940 aaPredicted RBP20.27■□□□□ 0.84
PDS5A-201ENST00000303538 CHMP4BP1P59074 171 aa20.26■□□□□ 0.83
PDS5A-201ENST00000303538 SMC3Q9UQE7 1217 aa20.26■□□□□ 0.83
PDS5A-201ENST00000303538 GGNBP2Q9H3C7 697 aa20.26■□□□□ 0.83
PDS5A-201ENST00000303538 BICDL1Q6ZP65 573 aa20.26■□□□□ 0.83
PDS5A-201ENST00000303538 BRMS1Q9HCU9 246 aa20.26■□□□□ 0.83
PDS5A-201ENST00000303538 CABP2Q9NPB3 220 aa20.26■□□□□ 0.83
PDS5A-201ENST00000303538 PTPRGP23470 1445 aa20.25■□□□□ 0.83
PDS5A-201ENST00000303538 CENPQQ7L2Z9 268 aaPredicted RBP20.25■□□□□ 0.83
PDS5A-201ENST00000303538 EXOC6Q8TAG9 804 aa20.25■□□□□ 0.83
PDS5A-201ENST00000303538 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
PDS5A-201ENST00000303538 API5Q9BZZ5 524 aaKnown RBP20.25■□□□□ 0.83
PDS5A-201ENST00000303538 WASHC2AQ641Q2 1341 aa20.25■□□□□ 0.83
PDS5A-201ENST00000303538 GPS2Q13227 327 aa20.24■□□□□ 0.83
PDS5A-201ENST00000303538 GRM1Q13255 1194 aa20.24■□□□□ 0.83
PDS5A-201ENST00000303538 TTLL5Q6EMB2 1281 aa20.24■□□□□ 0.83
PDS5A-201ENST00000303538 DDX19BQ9UMR2 479 aa20.24■□□□□ 0.83
PDS5A-201ENST00000303538 ERC2O15083 957 aa20.24■□□□□ 0.83
PDS5A-201ENST00000303538 SASS6Q6UVJ0 657 aa20.23■□□□□ 0.83
PDS5A-201ENST00000303538 DZIP1LQ8IYY4 767 aaKnown RBP20.23■□□□□ 0.83
PDS5A-201ENST00000303538 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
PDS5A-201ENST00000303538 SKIDA1Q1XH10 827 aa20.22■□□□□ 0.83
PDS5A-201ENST00000303538 LNPKQ9C0E8 428 aa20.22■□□□□ 0.83
PDS5A-201ENST00000303538 UBTFL1P0CB47 393 aaPredicted RBP20.22■□□□□ 0.83
PDS5A-201ENST00000303538 TBC1D2BQ9UPU7 963 aa20.21■□□□□ 0.83
PDS5A-201ENST00000303538 PDILTQ8N807 584 aa20.21■□□□□ 0.83
PDS5A-201ENST00000303538 CNNM1Q9NRU3 951 aa20.21■□□□□ 0.83
PDS5A-201ENST00000303538 ZNF219Q9P2Y4 722 aaPredicted RBP20.21■□□□□ 0.83
PDS5A-201ENST00000303538 XBP1P17861 261 aa20.2■□□□□ 0.82
PDS5A-201ENST00000303538 TOM1L2Q6ZVM7 507 aa20.2■□□□□ 0.82
PDS5A-201ENST00000303538 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
PDS5A-201ENST00000303538 CDK5RAP3Q96JB5 506 aa20.19■□□□□ 0.82
PDS5A-201ENST00000303538 FSD1Q9BTV5 496 aa20.19■□□□□ 0.82
PDS5A-201ENST00000303538 CCDC73Q6ZRK6 1079 aa20.19■□□□□ 0.82
PDS5A-201ENST00000303538 HSP90AB4PQ58FF6 505 aa20.19■□□□□ 0.82
PDS5A-201ENST00000303538 RUFY1Q96T51 708 aa20.19■□□□□ 0.82
PDS5A-201ENST00000303538 ROCK1Q13464 1354 aa20.18■□□□□ 0.82
PDS5A-201ENST00000303538 ADAMTS2O95450 1211 aa20.18■□□□□ 0.82
PDS5A-201ENST00000303538 KRT18P05783 430 aaKnown RBP20.18■□□□□ 0.82
PDS5A-201ENST00000303538 VSIG10Q8N0Z9 540 aa20.17■□□□□ 0.82
PDS5A-201ENST00000303538 GPRASP1Q5JY77 1395 aa20.17■□□□□ 0.82
PDS5A-201ENST00000303538 WDR70Q9NW82 654 aa20.17■□□□□ 0.82
PDS5A-201ENST00000303538 TXNDC2Q86VQ3 553 aa20.16■□□□□ 0.82
PDS5A-201ENST00000303538 PPM1FP49593 454 aaPredicted RBP20.16■□□□□ 0.82
PDS5A-201ENST00000303538 SART3Q15020 963 aaKnown RBP20.16■□□□□ 0.82
PDS5A-201ENST00000303538 GNAI1P63096 354 aa20.16■□□□□ 0.82
PDS5A-201ENST00000303538 INTS3Q68E01 1043 aaKnown RBP20.16■□□□□ 0.82
PDS5A-201ENST00000303538 PDE4AP27815 886 aa20.15■□□□□ 0.82
PDS5A-201ENST00000303538 ZHX3Q9H4I2 956 aa20.15■□□□□ 0.82
PDS5A-201ENST00000303538 RRP1P56182 461 aaKnown RBP20.15■□□□□ 0.82
PDS5A-201ENST00000303538 OLFM4Q6UX06 510 aa20.15■□□□□ 0.82
PDS5A-201ENST00000303538 ZSCAN29Q8IWY8 852 aaPredicted RBP20.15■□□□□ 0.82
PDS5A-201ENST00000303538 SLC3A2P08195 630 aaKnown RBP20.14■□□□□ 0.81
PDS5A-201ENST00000303538 BRPF1P55201 1214 aaPredicted RBP20.14■□□□□ 0.81
PDS5A-201ENST00000303538 SKOR2Q2VWA4 1001 aaPredicted RBP20.14■□□□□ 0.81
PDS5A-201ENST00000303538 RUNDC1Q96C34 613 aa20.14■□□□□ 0.81
PDS5A-201ENST00000303538 DHX57Q6P158 1386 aaKnown RBP20.14■□□□□ 0.81
PDS5A-201ENST00000303538 USP47Q96K76 1375 aa20.14■□□□□ 0.81
PDS5A-201ENST00000303538 TTC39AQ5SRH9 613 aa20.14■□□□□ 0.81
PDS5A-201ENST00000303538 TTLL12Q14166 644 aaPredicted RBP20.13■□□□□ 0.81
PDS5A-201ENST00000303538 SDF4Q9BRK5 362 aa20.12■□□□□ 0.81
PDS5A-201ENST00000303538 SURF6O75683 361 aaKnown RBP20.12■□□□□ 0.81
PDS5A-201ENST00000303538 SPINK5Q9NQ38 1064 aaPredicted RBP20.12■□□□□ 0.81
PDS5A-201ENST00000303538 CABP4P57796 275 aa20.11■□□□□ 0.81
PDS5A-201ENST00000303538 CAGE1Q8TC20 777 aa20.11■□□□□ 0.81
PDS5A-201ENST00000303538 ZNF771Q7L3S4 317 aaPredicted RBP20.11■□□□□ 0.81
PDS5A-201ENST00000303538 RAPGEF2Q9Y4G8 1499 aa20.11■□□□□ 0.81
PDS5A-201ENST00000303538 SYCP1Q15431 976 aa20.11■□□□□ 0.81
PDS5A-201ENST00000303538 CCDC173Q0VFZ6 552 aa20.11■□□□□ 0.81
PDS5A-201ENST00000303538 MYL6BP14649 208 aa20.1■□□□□ 0.81
PDS5A-201ENST00000303538 TATP17735 454 aaPredicted RBP20.1■□□□□ 0.81
PDS5A-201ENST00000303538 CNTROBQ8N137 903 aa20.1■□□□□ 0.81
PDS5A-201ENST00000303538 SIL1Q9H173 461 aa20.1■□□□□ 0.81
PDS5A-201ENST00000303538 IFT57Q9NWB7 429 aa20.1■□□□□ 0.81
PDS5A-201ENST00000303538 SPDYE4A6NLX3 237 aa20.1■□□□□ 0.81
PDS5A-201ENST00000303538 PLEKHO1Q53GL0 409 aaPredicted RBP20.1■□□□□ 0.81
PDS5A-201ENST00000303538 CLASRPQ8N2M8 674 aaKnown RBP20.09■□□□□ 0.81
PDS5A-201ENST00000303538 CEBPZQ03701 1054 aaKnown RBP20.09■□□□□ 0.81
PDS5A-201ENST00000303538 WWC3Q9ULE0 1092 aa20.09■□□□□ 0.81
PDS5A-201ENST00000303538 MPHOSPH10O00566 681 aaKnown RBP20.09■□□□□ 0.81
PDS5A-201ENST00000303538 PDCL3Q9H2J4 239 aa20.09■□□□□ 0.81
PDS5A-201ENST00000303538 ECM2O94769 699 aaPredicted RBP20.09■□□□□ 0.81
PDS5A-201ENST00000303538 FMNL2Q96PY5 1086 aa20.08■□□□□ 0.81
PDS5A-201ENST00000303538 GNL3LQ9NVN8 582 aaKnown RBP20.08■□□□□ 0.81
PDS5A-201ENST00000303538 AK7Q96M32 723 aa20.08■□□□□ 0.8
PDS5A-201ENST00000303538 PANK1Q8TE04 598 aa20.07■□□□□ 0.8
PDS5A-201ENST00000303538 NINLQ9Y2I6 1382 aa20.07■□□□□ 0.8
PDS5A-201ENST00000303538 CCDC30Q5VVM6 783 aa20.07■□□□□ 0.8
PDS5A-201ENST00000303538 MNS1Q8NEH6 495 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms