RNA–Protein interactions for RNA: ENST00000301904.3

SCARA3-201, Transcript of scavenger receptor class A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARA3, Length 3,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-201ENST00000301904 GAS2L2Q8NHY3 880 aa13□□□□□ -0.33
SCARA3-201ENST00000301904 CGNQ9P2M7 1197 aaKnown RBP13□□□□□ -0.33
SCARA3-201ENST00000301904 RBSNQ9H1K0 784 aa13□□□□□ -0.33
SCARA3-201ENST00000301904 CERS3Q8IU89 383 aa12.99□□□□□ -0.33
SCARA3-201ENST00000301904 IPO4Q8TEX9 1081 aaKnown RBP12.99□□□□□ -0.33
SCARA3-201ENST00000301904 RAB3GAP1Q15042 981 aa12.99□□□□□ -0.33
SCARA3-201ENST00000301904 WDR62O43379 1518 aa12.99□□□□□ -0.33
SCARA3-201ENST00000301904 APPP05067 770 aa12.99□□□□□ -0.33
SCARA3-201ENST00000301904 RTEL1-TNFRSF6BF6WH68 1400 aa12.98□□□□□ -0.33
SCARA3-201ENST00000301904 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
SCARA3-201ENST00000301904 CBX1P83916 185 aa12.98□□□□□ -0.33
SCARA3-201ENST00000301904 MVPQ14764 893 aaKnown RBP12.98□□□□□ -0.33
SCARA3-201ENST00000301904 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
SCARA3-201ENST00000301904 SENP3Q9H4L4 574 aaPredicted RBP12.98□□□□□ -0.33
SCARA3-201ENST00000301904 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
SCARA3-201ENST00000301904 PKP1Q13835 747 aa12.97□□□□□ -0.33
SCARA3-201ENST00000301904 DZIP1LQ8IYY4 767 aaKnown RBP12.97□□□□□ -0.33
SCARA3-201ENST00000301904 SMC4Q9NTJ3 1288 aa12.97□□□□□ -0.33
SCARA3-201ENST00000301904 C9orf84Q5VXU9 1444 aa12.97□□□□□ -0.33
SCARA3-201ENST00000301904 ZNF771Q7L3S4 317 aaPredicted RBP12.97□□□□□ -0.33
SCARA3-201ENST00000301904 PPP1R9BQ96SB3 815 aa12.97□□□□□ -0.33
SCARA3-201ENST00000301904 FOXD4L6Q3SYB3 417 aaPredicted RBP12.97□□□□□ -0.33
SCARA3-201ENST00000301904 FOXD4L3Q6VB84 417 aaPredicted RBP12.97□□□□□ -0.33
SCARA3-201ENST00000301904 INSRP06213 1382 aa12.97□□□□□ -0.33
SCARA3-201ENST00000301904 ARHGEF12Q9NZN5 1544 aa12.96□□□□□ -0.33
SCARA3-201ENST00000301904 GOLGA6L22H0YM25 854 aa12.96□□□□□ -0.33
SCARA3-201ENST00000301904 PRIM1P49642 420 aaKnown RBP12.96□□□□□ -0.33
SCARA3-201ENST00000301904 SKOR2Q2VWA4 1001 aaPredicted RBP12.96□□□□□ -0.33
SCARA3-201ENST00000301904 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.33
SCARA3-201ENST00000301904 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.33
SCARA3-201ENST00000301904 NUP153P49790 1475 aaKnown RBP12.96□□□□□ -0.33
SCARA3-201ENST00000301904 BAG4O95429 457 aaKnown RBP12.96□□□□□ -0.33
SCARA3-201ENST00000301904 DDIT3P35638 169 aa12.96□□□□□ -0.34
SCARA3-201ENST00000301904 CARD14Q9BXL6 1004 aa12.96□□□□□ -0.34
SCARA3-201ENST00000301904 URB2Q14146 1524 aaKnown RBP12.96□□□□□ -0.34
SCARA3-201ENST00000301904 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
SCARA3-201ENST00000301904 A2MP01023 1474 aa12.95□□□□□ -0.34
SCARA3-201ENST00000301904 PRPF40AO75400 957 aaKnown RBP12.95□□□□□ -0.34
SCARA3-201ENST00000301904 ZKSCAN2Q63HK3 967 aa12.95□□□□□ -0.34
SCARA3-201ENST00000301904 SMC5Q8IY18 1101 aa12.95□□□□□ -0.34
SCARA3-201ENST00000301904 ZNF830Q96NB3 372 aaPredicted RBP12.95□□□□□ -0.34
SCARA3-201ENST00000301904 ISY1Q9ULR0 285 aaKnown RBP12.95□□□□□ -0.34
SCARA3-201ENST00000301904 WDR7Q9Y4E6 1490 aa12.94□□□□□ -0.34
SCARA3-201ENST00000301904 MAP7D2Q96T17 732 aa12.94□□□□□ -0.34
SCARA3-201ENST00000301904 PTMAP06454 111 aaKnown RBP12.94□□□□□ -0.34
SCARA3-201ENST00000301904 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
SCARA3-201ENST00000301904 ANKRD45Q5TZF3 282 aa12.94□□□□□ -0.34
SCARA3-201ENST00000301904 PLEKHD1A6NEE1 506 aa12.93□□□□□ -0.34
SCARA3-201ENST00000301904 C17orf53Q8N3J3 647 aaPredicted RBP12.93□□□□□ -0.34
SCARA3-201ENST00000301904 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
SCARA3-201ENST00000301904 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
SCARA3-201ENST00000301904 K7ELQ4 463 aaPredicted RBP12.92□□□□□ -0.34
SCARA3-201ENST00000301904 TRIM27P14373 513 aa12.92□□□□□ -0.34
SCARA3-201ENST00000301904 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
SCARA3-201ENST00000301904 TMEM57Q8N5G2 664 aa12.92□□□□□ -0.34
SCARA3-201ENST00000301904 KIF2CQ99661 725 aa12.92□□□□□ -0.34
SCARA3-201ENST00000301904 ZBTB22O15209 634 aa12.92□□□□□ -0.34
SCARA3-201ENST00000301904 NOB1Q9ULX3 412 aaKnown RBP12.92□□□□□ -0.34
SCARA3-201ENST00000301904 SYCE3A1L190 88 aa12.92□□□□□ -0.34
SCARA3-201ENST00000301904 TROQ12816 1431 aaPredicted RBP12.92□□□□□ -0.34
SCARA3-201ENST00000301904 VIRMAQ69YN4 1812 aaKnown RBP12.92□□□□□ -0.34
SCARA3-201ENST00000301904 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
SCARA3-201ENST00000301904 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
SCARA3-201ENST00000301904 TNNT3P45378 269 aaPredicted RBP12.91□□□□□ -0.34
SCARA3-201ENST00000301904 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCARA3-201ENST00000301904 PLB1Q6P1J6 1458 aa12.91□□□□□ -0.34
SCARA3-201ENST00000301904 IQGAP2Q13576 1575 aa12.91□□□□□ -0.34
SCARA3-201ENST00000301904 NSFL1CQ9UNZ2 370 aaKnown RBP12.91□□□□□ -0.34
SCARA3-201ENST00000301904 KLHL40Q2TBA0 621 aa12.91□□□□□ -0.34
SCARA3-201ENST00000301904 SSH1Q8WYL5 1049 aa12.91□□□□□ -0.34
SCARA3-201ENST00000301904 NOL7Q9UMY1 257 aaKnown RBP12.91□□□□□ -0.34
SCARA3-201ENST00000301904 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
SCARA3-201ENST00000301904 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
SCARA3-201ENST00000301904 RBM25P49756 843 aaKnown RBP12.89□□□□□ -0.35
SCARA3-201ENST00000301904 GPRASP1Q5JY77 1395 aa12.89□□□□□ -0.35
SCARA3-201ENST00000301904 SNX21Q969T3 373 aa12.89□□□□□ -0.35
SCARA3-201ENST00000301904 TRERF1Q96PN7 1200 aa12.89□□□□□ -0.35
SCARA3-201ENST00000301904 PLA2R1Q13018 1463 aa12.89□□□□□ -0.35
SCARA3-201ENST00000301904 APBB1O00213 710 aa12.88□□□□□ -0.35
SCARA3-201ENST00000301904 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
SCARA3-201ENST00000301904 MTHFSP49914 203 aa12.88□□□□□ -0.35
SCARA3-201ENST00000301904 TBC1D9Q6ZT07 1266 aa12.88□□□□□ -0.35
SCARA3-201ENST00000301904 SMAP1Q8IYB5 467 aaPredicted RBP12.88□□□□□ -0.35
SCARA3-201ENST00000301904 ZGPATQ8N5A5 531 aaKnown RBP12.88□□□□□ -0.35
SCARA3-201ENST00000301904 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
SCARA3-201ENST00000301904 CEP170Q5SW79 1584 aa12.88□□□□□ -0.35
SCARA3-201ENST00000301904 NOL8Q76FK4 1167 aaKnown RBP12.88□□□□□ -0.35
SCARA3-201ENST00000301904 ZKSCAN5Q9Y2L8 839 aa12.88□□□□□ -0.35
SCARA3-201ENST00000301904 AK9Q5TCS8 1911 aa12.88□□□□□ -0.35
SCARA3-201ENST00000301904 CDCA8Q53HL2 280 aa12.88□□□□□ -0.35
SCARA3-201ENST00000301904 ADGRL2O95490 1459 aa12.87□□□□□ -0.35
SCARA3-201ENST00000301904 PATL2C9JE40 543 aaKnown RBP12.87□□□□□ -0.35
SCARA3-201ENST00000301904 CFAP70Q5T0N1 1121 aa12.87□□□□□ -0.35
SCARA3-201ENST00000301904 CHD1LQ86WJ1 897 aa12.87□□□□□ -0.35
SCARA3-201ENST00000301904 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
SCARA3-201ENST00000301904 PIK3C2GO75747 1445 aa12.87□□□□□ -0.35
SCARA3-201ENST00000301904 ASXL1Q8IXJ9 1541 aa12.87□□□□□ -0.35
SCARA3-201ENST00000301904 IRX3P78415 501 aaPredicted RBP12.87□□□□□ -0.35
SCARA3-201ENST00000301904 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
SCARA3-201ENST00000301904 LMBRD1Q9NUN5 540 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms