RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 TULP4Q9NRJ4 1543 aa19.17■□□□□ 0.66
CDH16-201ENST00000299752 SETD1AO15047 1707 aaKnown RBP19.17■□□□□ 0.66
CDH16-201ENST00000299752 BRD4O60885 1362 aaPredicted RBP19.17■□□□□ 0.66
CDH16-201ENST00000299752 NLRP13Q86W25 1043 aa19.16■□□□□ 0.66
CDH16-201ENST00000299752 LRPPRCP42704 1394 aaKnown RBP19.15■□□□□ 0.66
CDH16-201ENST00000299752 ADAMTS13Q76LX8 1427 aa19.15■□□□□ 0.66
CDH16-201ENST00000299752 NUTM2FA1L443 756 aa19.14■□□□□ 0.65
CDH16-201ENST00000299752 CEP170BQ9Y4F5 1589 aaPredicted RBP19.14■□□□□ 0.65
CDH16-201ENST00000299752 CDK19Q9BWU1 502 aa19.14■□□□□ 0.65
CDH16-201ENST00000299752 AMER1Q5JTC6 1135 aaPredicted RBP19.13■□□□□ 0.65
CDH16-201ENST00000299752 PLEKHG1Q9ULL1 1385 aa19.12■□□□□ 0.65
CDH16-201ENST00000299752 TNNT2P45379 298 aaPredicted RBP19.11■□□□□ 0.65
CDH16-201ENST00000299752 ZBED9Q6R2W3 1325 aa19.11■□□□□ 0.65
CDH16-201ENST00000299752 NCKAP5LQ9HCH0 1330 aa19.11■□□□□ 0.65
CDH16-201ENST00000299752 ROBO2Q9HCK4 1378 aa19.1■□□□□ 0.65
CDH16-201ENST00000299752 RBM33Q96EV2 1170 aaKnown RBP19.1■□□□□ 0.65
CDH16-201ENST00000299752 ABCC11Q96J66 1382 aa19.1■□□□□ 0.65
CDH16-201ENST00000299752 SLIT1O75093 1534 aa19.09■□□□□ 0.65
CDH16-201ENST00000299752 ARHGAP23Q9P227 1491 aa19.09■□□□□ 0.65
CDH16-201ENST00000299752 AMOTL2Q9Y2J4 779 aa19.08■□□□□ 0.65
CDH16-201ENST00000299752 NSD3Q9BZ95 1437 aa19.08■□□□□ 0.65
CDH16-201ENST00000299752 PTPRUQ92729 1446 aa19.08■□□□□ 0.64
CDH16-201ENST00000299752 CABP1Q9NZU7 370 aa19.07■□□□□ 0.64
CDH16-201ENST00000299752 SUPT16HQ9Y5B9 1047 aaKnown RBP19.07■□□□□ 0.64
CDH16-201ENST00000299752 ANKLE2Q86XL3 938 aa19.06■□□□□ 0.64
CDH16-201ENST00000299752 SETD1BQ9UPS6 1966 aaKnown RBP19.05■□□□□ 0.64
CDH16-201ENST00000299752 PPP2R1AP30153 589 aa19.04■□□□□ 0.64
CDH16-201ENST00000299752 NPC1L1Q9UHC9 1359 aa19.03■□□□□ 0.64
CDH16-201ENST00000299752 WASLO00401 505 aaPredicted RBP19.02■□□□□ 0.64
CDH16-201ENST00000299752 KCNA6P17658 529 aa19.02■□□□□ 0.64
CDH16-201ENST00000299752 TBX22Q9Y458 520 aa19.02■□□□□ 0.64
CDH16-201ENST00000299752 SALL2Q9Y467 1007 aaPredicted RBP19.02■□□□□ 0.64
CDH16-201ENST00000299752 A0A1W2PP64 1363 aa19.02■□□□□ 0.64
CDH16-201ENST00000299752 FKBP8Q14318 412 aa19.02■□□□□ 0.63
CDH16-201ENST00000299752 DLC1Q96QB1 1528 aa19.02■□□□□ 0.63
CDH16-201ENST00000299752 HSPA2P54652 639 aa19.01■□□□□ 0.63
CDH16-201ENST00000299752 MED14O60244 1454 aa19■□□□□ 0.63
CDH16-201ENST00000299752 PUS7Q96PZ0 661 aaKnown RBP19■□□□□ 0.63
CDH16-201ENST00000299752 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19■□□□□ 0.63
CDH16-201ENST00000299752 GGNBP2Q9H3C7 697 aa18.99■□□□□ 0.63
CDH16-201ENST00000299752 NEFLP07196 543 aa18.99■□□□□ 0.63
CDH16-201ENST00000299752 MORC1Q86VD1 984 aa18.99■□□□□ 0.63
CDH16-201ENST00000299752 ATAD2Q6PL18 1390 aa18.98■□□□□ 0.63
CDH16-201ENST00000299752 NUDT16Q96DE0 195 aaKnown RBP18.98■□□□□ 0.63
CDH16-201ENST00000299752 ANKRD36BQ8N2N9 1353 aa18.98■□□□□ 0.63
CDH16-201ENST00000299752 KDM4FA0A1W2PPD8 638 aa18.97■□□□□ 0.63
CDH16-201ENST00000299752 TECPR2O15040 1411 aa18.97■□□□□ 0.63
CDH16-201ENST00000299752 CPS1P31327 1500 aa18.97■□□□□ 0.63
CDH16-201ENST00000299752 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
CDH16-201ENST00000299752 PRR36Q9H6K5 1346 aa18.96■□□□□ 0.63
CDH16-201ENST00000299752 ZNF142P52746 1687 aaPredicted RBP18.96■□□□□ 0.63
CDH16-201ENST00000299752 FAM135BQ49AJ0 1406 aa18.96■□□□□ 0.63
CDH16-201ENST00000299752 TERF2IPQ9NYB0 399 aa18.96■□□□□ 0.63
CDH16-201ENST00000299752 CGNL1Q0VF96 1302 aa18.95■□□□□ 0.62
CDH16-201ENST00000299752 KNDC1Q76NI1 1749 aa18.95■□□□□ 0.62
CDH16-201ENST00000299752 HDGFL2Q7Z4V5 671 aaPredicted RBP18.94■□□□□ 0.62
CDH16-201ENST00000299752 PPIP5K1Q6PFW1 1433 aa18.94■□□□□ 0.62
CDH16-201ENST00000299752 CD163L1Q9NR16 1453 aa18.94■□□□□ 0.62
CDH16-201ENST00000299752 FBLN1P23142 703 aa18.93■□□□□ 0.62
CDH16-201ENST00000299752 ADAMTS8Q9UP79 889 aa18.93■□□□□ 0.62
CDH16-201ENST00000299752 PMFBP1Q8TBY8 1022 aa18.92■□□□□ 0.62
CDH16-201ENST00000299752 SIRT1Q96EB6 747 aa18.92■□□□□ 0.62
CDH16-201ENST00000299752 WDR43Q15061 677 aaKnown RBP eCLIP18.91■□□□□ 0.62
CDH16-201ENST00000299752 ZRANB1Q9UGI0 708 aa18.91■□□□□ 0.62
CDH16-201ENST00000299752 CCDC61Q9Y6R9 512 aa18.9■□□□□ 0.62
CDH16-201ENST00000299752 NPHP4O75161 1426 aaPredicted RBP18.9■□□□□ 0.62
CDH16-201ENST00000299752 FYB1O15117 783 aa18.9■□□□□ 0.62
CDH16-201ENST00000299752 NINLQ9Y2I6 1382 aa18.89■□□□□ 0.61
CDH16-201ENST00000299752 BLMP54132 1417 aaPredicted RBP18.89■□□□□ 0.61
CDH16-201ENST00000299752 SMG6Q86US8 1419 aaKnown RBP18.89■□□□□ 0.61
CDH16-201ENST00000299752 IRX6P78412 446 aaPredicted RBP18.88■□□□□ 0.61
CDH16-201ENST00000299752 C14orf37Q86TY3 774 aa18.88■□□□□ 0.61
CDH16-201ENST00000299752 NUDCQ9Y266 331 aa18.88■□□□□ 0.61
CDH16-201ENST00000299752 MTHFSP49914 203 aa18.87■□□□□ 0.61
CDH16-201ENST00000299752 NME9Q86XW9 330 aa18.87■□□□□ 0.61
CDH16-201ENST00000299752 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
CDH16-201ENST00000299752 INSRP06213 1382 aa18.86■□□□□ 0.61
CDH16-201ENST00000299752 ATP7BP35670 1465 aa18.86■□□□□ 0.61
CDH16-201ENST00000299752 DIP2AQ14689 1571 aa18.86■□□□□ 0.61
CDH16-201ENST00000299752 USP32Q8NFA0 1604 aa18.86■□□□□ 0.61
CDH16-201ENST00000299752 XRN1Q8IZH2 1706 aaKnown RBP18.85■□□□□ 0.61
CDH16-201ENST00000299752 PPM1GO15355 546 aaPredicted RBP18.84■□□□□ 0.61
CDH16-201ENST00000299752 PTCH1Q13635 1447 aa18.84■□□□□ 0.61
CDH16-201ENST00000299752 ACEP12821 1306 aa18.84■□□□□ 0.61
CDH16-201ENST00000299752 RGPD8O14715 1765 aaPredicted RBP18.83■□□□□ 0.61
CDH16-201ENST00000299752 SOX12O15370 315 aa18.83■□□□□ 0.6
CDH16-201ENST00000299752 CHD2O14647 1828 aaKnown RBP18.82■□□□□ 0.6
CDH16-201ENST00000299752 NSD2O96028 1365 aa18.81■□□□□ 0.6
CDH16-201ENST00000299752 NGDNQ8NEJ9 315 aaKnown RBP18.81■□□□□ 0.6
CDH16-201ENST00000299752 NKTRP30414 1462 aaKnown RBP18.8■□□□□ 0.6
CDH16-201ENST00000299752 POLR3AO14802 1390 aaPredicted RBP18.8■□□□□ 0.6
CDH16-201ENST00000299752 PIK3R4Q99570 1358 aa18.8■□□□□ 0.6
CDH16-201ENST00000299752 CPSF1Q10570 1443 aaKnown RBP18.79■□□□□ 0.6
CDH16-201ENST00000299752 PLEKHG5O94827 1062 aa18.79■□□□□ 0.6
CDH16-201ENST00000299752 PROSER2Q86WR7 435 aaPredicted RBP18.79■□□□□ 0.6
CDH16-201ENST00000299752 CDCA7LQ96GN5 454 aa18.79■□□□□ 0.6
CDH16-201ENST00000299752 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
CDH16-201ENST00000299752 ADGRB2O60241 1585 aa18.78■□□□□ 0.6
CDH16-201ENST00000299752 CDC42BPGQ6DT37 1551 aa18.77■□□□□ 0.6
CDH16-201ENST00000299752 NUTM2GQ5VZR2 741 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms