RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 ZNF772Q68DY9 489 aaPredicted RBP20.41■□□□□ 0.86
TMEM41B-201ENST00000299596 WAPLQ7Z5K2 1190 aa20.41■□□□□ 0.86
TMEM41B-201ENST00000299596 NUTM2AQ8IVF1 878 aaPredicted RBP20.41■□□□□ 0.86
TMEM41B-201ENST00000299596 SIRT1Q96EB6 747 aa20.4■□□□□ 0.86
TMEM41B-201ENST00000299596 YTHDC2Q9H6S0 1430 aaKnown RBP20.38■□□□□ 0.85
TMEM41B-201ENST00000299596 MYOM2P54296 1465 aa20.38■□□□□ 0.85
TMEM41B-201ENST00000299596 NRXN1Q9ULB1 1477 aa20.38■□□□□ 0.85
TMEM41B-201ENST00000299596 SOS2Q07890 1332 aaPredicted RBP20.38■□□□□ 0.85
TMEM41B-201ENST00000299596 CFAP70Q5T0N1 1121 aa20.37■□□□□ 0.85
TMEM41B-201ENST00000299596 DHX57Q6P158 1386 aaKnown RBP20.37■□□□□ 0.85
TMEM41B-201ENST00000299596 ESCO1Q5FWF5 840 aa20.36■□□□□ 0.85
TMEM41B-201ENST00000299596 CDC42BPGQ6DT37 1551 aa20.36■□□□□ 0.85
TMEM41B-201ENST00000299596 PNPLA6Q8IY17 1366 aa20.36■□□□□ 0.85
TMEM41B-201ENST00000299596 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
TMEM41B-201ENST00000299596 PLEKHH1Q9ULM0 1364 aa20.34■□□□□ 0.85
TMEM41B-201ENST00000299596 LAMC1P11047 1609 aa20.34■□□□□ 0.85
TMEM41B-201ENST00000299596 NPHP3Q7Z494 1330 aa20.34■□□□□ 0.85
TMEM41B-201ENST00000299596 KNDC1Q76NI1 1749 aa20.32■□□□□ 0.84
TMEM41B-201ENST00000299596 DCAF11Q8TEB1 546 aa20.31■□□□□ 0.84
TMEM41B-201ENST00000299596 NUTM2FA1L443 756 aa20.3■□□□□ 0.84
TMEM41B-201ENST00000299596 KDM2AQ9Y2K7 1162 aa20.3■□□□□ 0.84
TMEM41B-201ENST00000299596 AFF2P51816 1311 aa20.29■□□□□ 0.84
TMEM41B-201ENST00000299596 FOXO3O43524 673 aa20.29■□□□□ 0.84
TMEM41B-201ENST00000299596 C8orf37Q96NL8 207 aa20.28■□□□□ 0.84
TMEM41B-201ENST00000299596 PRAM1Q96QH2 718 aa20.28■□□□□ 0.84
TMEM41B-201ENST00000299596 RXRBP28702 533 aa20.27■□□□□ 0.84
TMEM41B-201ENST00000299596 POGKQ9P215 609 aa20.27■□□□□ 0.83
TMEM41B-201ENST00000299596 ADAMTS2O95450 1211 aa20.26■□□□□ 0.83
TMEM41B-201ENST00000299596 NGLY1Q96IV0 654 aa20.26■□□□□ 0.83
TMEM41B-201ENST00000299596 SAFB2Q14151 953 aaKnown RBP eCLIP20.24■□□□□ 0.83
TMEM41B-201ENST00000299596 DLC1Q96QB1 1528 aa20.24■□□□□ 0.83
TMEM41B-201ENST00000299596 PXDNQ92626 1479 aa20.23■□□□□ 0.83
TMEM41B-201ENST00000299596 XPCQ01831 940 aaPredicted RBP20.23■□□□□ 0.83
TMEM41B-201ENST00000299596 QTRT2Q9H974 415 aaKnown RBP20.23■□□□□ 0.83
TMEM41B-201ENST00000299596 TRAK1Q9UPV9 953 aa20.22■□□□□ 0.83
TMEM41B-201ENST00000299596 FMN2Q9NZ56 1722 aa20.22■□□□□ 0.83
TMEM41B-201ENST00000299596 ADGRB1O14514 1584 aa20.22■□□□□ 0.83
TMEM41B-201ENST00000299596 PHF8Q9UPP1 1060 aa20.21■□□□□ 0.83
TMEM41B-201ENST00000299596 RBM6P78332 1123 aaKnown RBP20.19■□□□□ 0.82
TMEM41B-201ENST00000299596 KRT28Q7Z3Y7 464 aa20.19■□□□□ 0.82
TMEM41B-201ENST00000299596 CDK12Q9NYV4 1490 aaPredicted RBP20.19■□□□□ 0.82
TMEM41B-201ENST00000299596 PSME1Q06323 249 aa20.19■□□□□ 0.82
TMEM41B-201ENST00000299596 FNBP4Q8N3X1 1017 aaPredicted RBP20.19■□□□□ 0.82
TMEM41B-201ENST00000299596 COL22A1Q8NFW1 1626 aaPredicted RBP20.18■□□□□ 0.82
TMEM41B-201ENST00000299596 SPATA31A3Q5VYP0 1347 aa20.18■□□□□ 0.82
TMEM41B-201ENST00000299596 USP21Q9UK80 565 aa20.18■□□□□ 0.82
TMEM41B-201ENST00000299596 KIF1AQ12756 1690 aa20.17■□□□□ 0.82
TMEM41B-201ENST00000299596 ANKARQ7Z5J8 1434 aa20.15■□□□□ 0.82
TMEM41B-201ENST00000299596 TRPC5Q9UL62 973 aaPredicted RBP20.15■□□□□ 0.82
TMEM41B-201ENST00000299596 HIRIP3Q9BW71 556 aaPredicted RBP20.14■□□□□ 0.81
TMEM41B-201ENST00000299596 MINK1Q8N4C8 1332 aaPredicted RBP20.14■□□□□ 0.81
TMEM41B-201ENST00000299596 EIF3AQ14152 1382 aaKnown RBP20.14■□□□□ 0.81
TMEM41B-201ENST00000299596 WASLO00401 505 aaPredicted RBP20.12■□□□□ 0.81
TMEM41B-201ENST00000299596 ADGRB2O60241 1585 aa20.12■□□□□ 0.81
TMEM41B-201ENST00000299596 PMFBP1Q8TBY8 1022 aa20.11■□□□□ 0.81
TMEM41B-201ENST00000299596 UPF1Q92900 1129 aaKnown RBP eCLIP20.11■□□□□ 0.81
TMEM41B-201ENST00000299596 SBNO1A3KN83 1393 aa20.11■□□□□ 0.81
TMEM41B-201ENST00000299596 TNS3Q68CZ2 1445 aa20.09■□□□□ 0.81
TMEM41B-201ENST00000299596 RGPD8O14715 1765 aaPredicted RBP20.08■□□□□ 0.8
TMEM41B-201ENST00000299596 RGS12O14924 1447 aa20.08■□□□□ 0.8
TMEM41B-201ENST00000299596 ARHGEF10O15013 1369 aa20.08■□□□□ 0.8
TMEM41B-201ENST00000299596 HAP1P54257 671 aaPredicted RBP20.08■□□□□ 0.8
TMEM41B-201ENST00000299596 LMOD2Q6P5Q4 547 aa20.08■□□□□ 0.8
TMEM41B-201ENST00000299596 ATRNO75882 1429 aa20.07■□□□□ 0.8
TMEM41B-201ENST00000299596 PRR36Q9H6K5 1346 aa20.07■□□□□ 0.8
TMEM41B-201ENST00000299596 TULP4Q9NRJ4 1543 aa20.06■□□□□ 0.8
TMEM41B-201ENST00000299596 BCL9LQ86UU0 1499 aa20.06■□□□□ 0.8
TMEM41B-201ENST00000299596 GPRASP1Q5JY77 1395 aa20.06■□□□□ 0.8
TMEM41B-201ENST00000299596 USP32Q8NFA0 1604 aa20.06■□□□□ 0.8
TMEM41B-201ENST00000299596 UNC5CLQ8IV45 518 aa20.04■□□□□ 0.8
TMEM41B-201ENST00000299596 NGDNQ8NEJ9 315 aaKnown RBP20.04■□□□□ 0.8
TMEM41B-201ENST00000299596 NBPF1Q3BBV0 1214 aa20.03■□□□□ 0.8
TMEM41B-201ENST00000299596 CABLES1Q8TDN4 633 aa20.03■□□□□ 0.8
TMEM41B-201ENST00000299596 NUDT16Q96DE0 195 aaKnown RBP20.02■□□□□ 0.8
TMEM41B-201ENST00000299596 GJD4Q96KN9 370 aaPredicted RBP20.02■□□□□ 0.8
TMEM41B-201ENST00000299596 KIAA1210Q9ULL0 1709 aa20.02■□□□□ 0.8
TMEM41B-201ENST00000299596 CDK19Q9BWU1 502 aa20.02■□□□□ 0.79
TMEM41B-201ENST00000299596 ARHGEF28Q8N1W1 1705 aaKnown RBP20.01■□□□□ 0.79
TMEM41B-201ENST00000299596 MARF1Q9Y4F3 1742 aaKnown RBP20.01■□□□□ 0.79
TMEM41B-201ENST00000299596 SLIT2O94813 1529 aa20.01■□□□□ 0.79
TMEM41B-201ENST00000299596 PLEKHG5O94827 1062 aa20.01■□□□□ 0.79
TMEM41B-201ENST00000299596 L3MBTL2Q969R5 705 aa20.01■□□□□ 0.79
TMEM41B-201ENST00000299596 SIN3AQ96ST3 1273 aa19.99■□□□□ 0.79
TMEM41B-201ENST00000299596 CCDC61Q9Y6R9 512 aa19.98■□□□□ 0.79
TMEM41B-201ENST00000299596 ATAD2Q6PL18 1390 aa19.98■□□□□ 0.79
TMEM41B-201ENST00000299596 PAK3O75914 559 aaPredicted RBP19.97■□□□□ 0.79
TMEM41B-201ENST00000299596 ATP7BP35670 1465 aa19.97■□□□□ 0.79
TMEM41B-201ENST00000299596 NEUROD1Q13562 356 aa19.96■□□□□ 0.79
TMEM41B-201ENST00000299596 CENPJQ9HC77 1338 aaPredicted RBP19.96■□□□□ 0.79
TMEM41B-201ENST00000299596 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
TMEM41B-201ENST00000299596 PLEKHG3A1L390 1219 aa19.94■□□□□ 0.78
TMEM41B-201ENST00000299596 VPS72Q15906 364 aa19.94■□□□□ 0.78
TMEM41B-201ENST00000299596 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.94■□□□□ 0.78
TMEM41B-201ENST00000299596 TRPM3Q9HCF6 1732 aaPredicted RBP19.94■□□□□ 0.78
TMEM41B-201ENST00000299596 RALGAPBQ86X10 1494 aa19.93■□□□□ 0.78
TMEM41B-201ENST00000299596 NBPF8Q3BBV2 869 aa19.93■□□□□ 0.78
TMEM41B-201ENST00000299596 ACEP12821 1306 aa19.92■□□□□ 0.78
TMEM41B-201ENST00000299596 SRPK2P78362 688 aaKnown RBP19.92■□□□□ 0.78
TMEM41B-201ENST00000299596 ITSN1Q15811 1721 aa19.91■□□□□ 0.78
TMEM41B-201ENST00000299596 POLR3AO14802 1390 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms