RNA–Protein interactions for RNA: ENST00000299300.10

CCT2-201, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT2, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-201ENST00000299300 TRAK1Q9UPV9 953 aa18.22■□□□□ 0.51
CCT2-201ENST00000299300 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
CCT2-201ENST00000299300 ZFYVE9O95405 1425 aa18.21■□□□□ 0.51
CCT2-201ENST00000299300 RICTORQ6R327 1708 aa18.21■□□□□ 0.5
CCT2-201ENST00000299300 NCBP3Q53F19 620 aaKnown RBP18.2■□□□□ 0.5
CCT2-201ENST00000299300 SKAP1Q86WV1 359 aa18.2■□□□□ 0.5
CCT2-201ENST00000299300 DEKP35659 375 aaKnown RBP18.2■□□□□ 0.5
CCT2-201ENST00000299300 WWC1Q8IX03 1113 aa18.2■□□□□ 0.5
CCT2-201ENST00000299300 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
CCT2-201ENST00000299300 GGT6Q6P531 493 aa18.19■□□□□ 0.5
CCT2-201ENST00000299300 NPM2Q86SE8 214 aaKnown RBP18.19■□□□□ 0.5
CCT2-201ENST00000299300 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
CCT2-201ENST00000299300 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
CCT2-201ENST00000299300 NSD2O96028 1365 aa18.19■□□□□ 0.5
CCT2-201ENST00000299300 PDE3AQ14432 1141 aa18.18■□□□□ 0.5
CCT2-201ENST00000299300 BCAR3O75815 825 aa18.17■□□□□ 0.5
CCT2-201ENST00000299300 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
CCT2-201ENST00000299300 NBR1Q14596 966 aa18.16■□□□□ 0.5
CCT2-201ENST00000299300 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
CCT2-201ENST00000299300 RUNDC1Q96C34 613 aa18.16■□□□□ 0.5
CCT2-201ENST00000299300 ANKRD36BQ8N2N9 1353 aa18.16■□□□□ 0.5
CCT2-201ENST00000299300 VIRMAQ69YN4 1812 aaKnown RBP18.16■□□□□ 0.5
CCT2-201ENST00000299300 DDRGK1Q96HY6 314 aa18.15■□□□□ 0.5
CCT2-201ENST00000299300 VGFO15240 615 aaPredicted RBP18.15■□□□□ 0.5
CCT2-201ENST00000299300 CCDC27Q2M243 656 aa18.15■□□□□ 0.5
CCT2-201ENST00000299300 CGNL1Q0VF96 1302 aa18.15■□□□□ 0.5
CCT2-201ENST00000299300 ADGRB2O60241 1585 aa18.15■□□□□ 0.5
CCT2-201ENST00000299300 EVC2Q86UK5 1308 aa18.14■□□□□ 0.49
CCT2-201ENST00000299300 FAM161AQ3B820 660 aa18.14■□□□□ 0.49
CCT2-201ENST00000299300 C8orf34Q49A92 452 aa18.14■□□□□ 0.49
CCT2-201ENST00000299300 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
CCT2-201ENST00000299300 MYO5BQ9ULV0 1848 aa18.12■□□□□ 0.49
CCT2-201ENST00000299300 CLTCQ00610 1675 aaKnown RBP18.12■□□□□ 0.49
CCT2-201ENST00000299300 PREX1Q8TCU6 1659 aa18.12■□□□□ 0.49
CCT2-201ENST00000299300 TMEM131LA2VDJ0 1609 aa18.12■□□□□ 0.49
CCT2-201ENST00000299300 ANKRD26Q9UPS8 1709 aa18.11■□□□□ 0.49
CCT2-201ENST00000299300 TCP11L2Q8N4U5 519 aa18.1■□□□□ 0.49
CCT2-201ENST00000299300 MTHFSP49914 203 aa18.1■□□□□ 0.49
CCT2-201ENST00000299300 USP35Q9P2H5 1018 aa18.1■□□□□ 0.49
CCT2-201ENST00000299300 RAPGEF3O95398 923 aa18.09■□□□□ 0.49
CCT2-201ENST00000299300 AAMPQ13685 434 aa18.09■□□□□ 0.49
CCT2-201ENST00000299300 RTL5Q5HYW3 569 aaPredicted RBP18.08■□□□□ 0.49
CCT2-201ENST00000299300 CFAP53Q96M91 514 aa18.08■□□□□ 0.49
CCT2-201ENST00000299300 SLC52A1Q9NWF4 448 aa18.08■□□□□ 0.49
CCT2-201ENST00000299300 ABCC11Q96J66 1382 aa18.08■□□□□ 0.49
CCT2-201ENST00000299300 PPM1GO15355 546 aaPredicted RBP18.08■□□□□ 0.48
CCT2-201ENST00000299300 RARSP54136 660 aaKnown RBP18.08■□□□□ 0.48
CCT2-201ENST00000299300 IDI1Q13907 227 aa18.08■□□□□ 0.48
CCT2-201ENST00000299300 MED14O60244 1454 aa18.07■□□□□ 0.48
CCT2-201ENST00000299300 PTPRMP28827 1452 aa18.07■□□□□ 0.48
CCT2-201ENST00000299300 IGHDP01880 384 aa18.07■□□□□ 0.48
CCT2-201ENST00000299300 COL3A1P02461 1466 aaPredicted RBP18.06■□□□□ 0.48
CCT2-201ENST00000299300 CLUAP1Q96AJ1 413 aa18.06■□□□□ 0.48
CCT2-201ENST00000299300 YEATS2Q9ULM3 1422 aa18.05■□□□□ 0.48
CCT2-201ENST00000299300 TNNT2P45379 298 aaPredicted RBP18.05■□□□□ 0.48
CCT2-201ENST00000299300 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
CCT2-201ENST00000299300 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
CCT2-201ENST00000299300 NLRP1Q9C000 1473 aa18.03■□□□□ 0.48
CCT2-201ENST00000299300 A0A1W2PP64 1363 aa18.03■□□□□ 0.48
CCT2-201ENST00000299300 CD163L1Q9NR16 1453 aa18.03■□□□□ 0.48
CCT2-201ENST00000299300 ZMYM3Q14202 1370 aa18.02■□□□□ 0.48
CCT2-201ENST00000299300 CABP2Q9NPB3 220 aa18.02■□□□□ 0.48
CCT2-201ENST00000299300 COG6Q9Y2V7 657 aa18.01■□□□□ 0.47
CCT2-201ENST00000299300 LAS1LQ9Y4W2 734 aaKnown RBP18.01■□□□□ 0.47
CCT2-201ENST00000299300 ATAD2Q6PL18 1390 aa18.01■□□□□ 0.47
CCT2-201ENST00000299300 RGS3P49796 1198 aa18.01■□□□□ 0.47
CCT2-201ENST00000299300 NUTM2DQ5VT03 806 aaPredicted RBP18.01■□□□□ 0.47
CCT2-201ENST00000299300 MAPK8IP3Q9UPT6 1336 aa18.01■□□□□ 0.47
CCT2-201ENST00000299300 YTHDC2Q9H6S0 1430 aaKnown RBP18■□□□□ 0.47
CCT2-201ENST00000299300 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
CCT2-201ENST00000299300 CT47B1P0C2W7 299 aaPredicted RBP17.99■□□□□ 0.47
CCT2-201ENST00000299300 NEUROD2Q15784 382 aa17.99■□□□□ 0.47
CCT2-201ENST00000299300 REREQ9P2R6 1566 aa17.99■□□□□ 0.47
CCT2-201ENST00000299300 ALKQ9UM73 1620 aa17.99■□□□□ 0.47
CCT2-201ENST00000299300 NEFMP07197 916 aa17.98■□□□□ 0.47
CCT2-201ENST00000299300 PLEKHF1Q96S99 279 aa17.98■□□□□ 0.47
CCT2-201ENST00000299300 KIF20BQ96Q89 1820 aa17.98■□□□□ 0.47
CCT2-201ENST00000299300 USP19O94966 1318 aa17.98■□□□□ 0.47
CCT2-201ENST00000299300 CANXP27824 592 aaKnown RBP17.98■□□□□ 0.47
CCT2-201ENST00000299300 PMFBP1Q8TBY8 1022 aa17.98■□□□□ 0.47
CCT2-201ENST00000299300 ARHGEF40Q8TER5 1519 aa17.97■□□□□ 0.47
CCT2-201ENST00000299300 RLBP1P12271 317 aa17.97■□□□□ 0.47
CCT2-201ENST00000299300 CDC42BPGQ6DT37 1551 aa17.97■□□□□ 0.47
CCT2-201ENST00000299300 U2AF1L5P0DN76 240 aaPredicted RBP17.96■□□□□ 0.47
CCT2-201ENST00000299300 U2AF1Q01081 240 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCT2-201ENST00000299300 DLC1Q96QB1 1528 aa17.96■□□□□ 0.46
CCT2-201ENST00000299300 PNPLA6Q8IY17 1366 aa17.95■□□□□ 0.46
CCT2-201ENST00000299300 PCDHB15Q9Y5E8 787 aa17.95■□□□□ 0.46
CCT2-201ENST00000299300 SETD1AO15047 1707 aaKnown RBP17.95■□□□□ 0.46
CCT2-201ENST00000299300 FRAT1Q92837 279 aaPredicted RBP17.94■□□□□ 0.46
CCT2-201ENST00000299300 TNNQ9UQP3 1299 aa17.94■□□□□ 0.46
CCT2-201ENST00000299300 AGLP35573 1532 aa17.94■□□□□ 0.46
CCT2-201ENST00000299300 IL16Q14005 1332 aa17.94■□□□□ 0.46
CCT2-201ENST00000299300 FYB1O15117 783 aa17.94■□□□□ 0.46
CCT2-201ENST00000299300 TERF2IPQ9NYB0 399 aa17.94■□□□□ 0.46
CCT2-201ENST00000299300 SRPK2P78362 688 aaKnown RBP17.93■□□□□ 0.46
CCT2-201ENST00000299300 TMPOP42166 694 aaKnown RBP17.92■□□□□ 0.46
CCT2-201ENST00000299300 STK26Q9P289 416 aa17.92■□□□□ 0.46
CCT2-201ENST00000299300 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
CCT2-201ENST00000299300 SAFB2Q14151 953 aaKnown RBP eCLIP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms