RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TONSLQ96HA7 1378 aa17.31■□□□□ 0.36
HMGB2-201ENST00000296503 KNDC1Q76NI1 1749 aa17.31■□□□□ 0.36
HMGB2-201ENST00000296503 MST1RQ04912 1400 aa17.31■□□□□ 0.36
HMGB2-201ENST00000296503 ADGRB1O14514 1584 aa17.31■□□□□ 0.36
HMGB2-201ENST00000296503 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
HMGB2-201ENST00000296503 ESCO1Q5FWF5 840 aa17.28■□□□□ 0.36
HMGB2-201ENST00000296503 ORAI2Q96SN7 254 aa17.28■□□□□ 0.36
HMGB2-201ENST00000296503 C1orf167Q5SNV9 1468 aa17.28■□□□□ 0.36
HMGB2-201ENST00000296503 ZEB1P37275 1124 aaPredicted RBP17.27■□□□□ 0.36
HMGB2-201ENST00000296503 MINK1Q8N4C8 1332 aaPredicted RBP17.27■□□□□ 0.35
HMGB2-201ENST00000296503 DLC1Q96QB1 1528 aa17.27■□□□□ 0.35
HMGB2-201ENST00000296503 HIRIP3Q9BW71 556 aaPredicted RBP17.27■□□□□ 0.35
HMGB2-201ENST00000296503 CCER1Q8TC90 406 aaPredicted RBP17.25■□□□□ 0.35
HMGB2-201ENST00000296503 DDX17Q92841 729 aaKnown RBP17.25■□□□□ 0.35
HMGB2-201ENST00000296503 KIAA1210Q9ULL0 1709 aa17.25■□□□□ 0.35
HMGB2-201ENST00000296503 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
HMGB2-201ENST00000296503 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
HMGB2-201ENST00000296503 CDC42BPGQ6DT37 1551 aa17.23■□□□□ 0.35
HMGB2-201ENST00000296503 ROCK2O75116 1388 aaKnown RBP17.22■□□□□ 0.35
HMGB2-201ENST00000296503 CLSPNQ9HAW4 1339 aa17.22■□□□□ 0.35
HMGB2-201ENST00000296503 DISP3Q9P2K9 1392 aa17.21■□□□□ 0.35
HMGB2-201ENST00000296503 LRRC59Q96AG4 307 aaKnown RBP17.2■□□□□ 0.34
HMGB2-201ENST00000296503 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
HMGB2-201ENST00000296503 FOXO3O43524 673 aa17.2■□□□□ 0.34
HMGB2-201ENST00000296503 JCADQ9P266 1359 aa17.2■□□□□ 0.34
HMGB2-201ENST00000296503 AHDC1Q5TGY3 1603 aaPredicted RBP17.19■□□□□ 0.34
HMGB2-201ENST00000296503 CENPJQ9HC77 1338 aaPredicted RBP17.18■□□□□ 0.34
HMGB2-201ENST00000296503 CARD11Q9BXL7 1154 aa17.18■□□□□ 0.34
HMGB2-201ENST00000296503 TRPM1Q7Z4N2 1603 aa17.17■□□□□ 0.34
HMGB2-201ENST00000296503 ARHGEF28Q8N1W1 1705 aaKnown RBP17.17■□□□□ 0.34
HMGB2-201ENST00000296503 PHF8Q9UPP1 1060 aa17.17■□□□□ 0.34
HMGB2-201ENST00000296503 NPHP3Q7Z494 1330 aa17.17■□□□□ 0.34
HMGB2-201ENST00000296503 FMN2Q9NZ56 1722 aa17.17■□□□□ 0.34
HMGB2-201ENST00000296503 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
HMGB2-201ENST00000296503 CDK19Q9BWU1 502 aa17.16■□□□□ 0.34
HMGB2-201ENST00000296503 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
HMGB2-201ENST00000296503 TIMELESSQ9UNS1 1208 aa17.16■□□□□ 0.34
HMGB2-201ENST00000296503 PMFBP1Q8TBY8 1022 aa17.15■□□□□ 0.34
HMGB2-201ENST00000296503 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
HMGB2-201ENST00000296503 NHSL1Q5SYE7 1610 aa17.15■□□□□ 0.34
HMGB2-201ENST00000296503 EIF3AQ14152 1382 aaKnown RBP17.14■□□□□ 0.34
HMGB2-201ENST00000296503 SOS2Q07890 1332 aaPredicted RBP17.14■□□□□ 0.33
HMGB2-201ENST00000296503 NUTM2BA6NNL0 878 aaPredicted RBP17.13■□□□□ 0.33
HMGB2-201ENST00000296503 NUTM2EB1AL46 878 aaPredicted RBP17.13■□□□□ 0.33
HMGB2-201ENST00000296503 PSME1Q06323 249 aa17.13■□□□□ 0.33
HMGB2-201ENST00000296503 KRT28Q7Z3Y7 464 aa17.13■□□□□ 0.33
HMGB2-201ENST00000296503 NUTM2AQ8IVF1 878 aaPredicted RBP17.13■□□□□ 0.33
HMGB2-201ENST00000296503 NUDT16Q96DE0 195 aaKnown RBP17.13■□□□□ 0.33
HMGB2-201ENST00000296503 ADGRB2O60241 1585 aa17.13■□□□□ 0.33
HMGB2-201ENST00000296503 RGPD8O14715 1765 aaPredicted RBP17.13■□□□□ 0.33
HMGB2-201ENST00000296503 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
HMGB2-201ENST00000296503 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
HMGB2-201ENST00000296503 SPATA31A6Q5VVP1 1343 aa17.12■□□□□ 0.33
HMGB2-201ENST00000296503 PRR36Q9H6K5 1346 aa17.12■□□□□ 0.33
HMGB2-201ENST00000296503 SRPK2P78362 688 aaKnown RBP17.12■□□□□ 0.33
HMGB2-201ENST00000296503 GPRASP1Q5JY77 1395 aa17.11■□□□□ 0.33
HMGB2-201ENST00000296503 MEX3CQ5U5Q3 659 aaKnown RBP17.1■□□□□ 0.33
HMGB2-201ENST00000296503 NGDNQ8NEJ9 315 aaKnown RBP17.1■□□□□ 0.33
HMGB2-201ENST00000296503 RALGAPBQ86X10 1494 aa17.09■□□□□ 0.33
HMGB2-201ENST00000296503 TULP4Q9NRJ4 1543 aa17.09■□□□□ 0.33
HMGB2-201ENST00000296503 CABP2Q9NPB3 220 aa17.09■□□□□ 0.33
HMGB2-201ENST00000296503 CCDC61Q9Y6R9 512 aa17.08■□□□□ 0.33
HMGB2-201ENST00000296503 PNPLA6Q8IY17 1366 aa17.08■□□□□ 0.32
HMGB2-201ENST00000296503 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
HMGB2-201ENST00000296503 EVC2Q86UK5 1308 aa17.07■□□□□ 0.32
HMGB2-201ENST00000296503 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
HMGB2-201ENST00000296503 LMOD2Q6P5Q4 547 aa17.07■□□□□ 0.32
HMGB2-201ENST00000296503 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
HMGB2-201ENST00000296503 QRICH2Q9H0J4 1663 aa17.06■□□□□ 0.32
HMGB2-201ENST00000296503 PXDNQ92626 1479 aa17.06■□□□□ 0.32
HMGB2-201ENST00000296503 SPATA31A3Q5VYP0 1347 aa17.05■□□□□ 0.32
HMGB2-201ENST00000296503 ATP7BP35670 1465 aa17.03■□□□□ 0.32
HMGB2-201ENST00000296503 PAK3O75914 559 aaPredicted RBP17.03■□□□□ 0.32
HMGB2-201ENST00000296503 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
HMGB2-201ENST00000296503 ADAMTS2O95450 1211 aa17.03■□□□□ 0.32
HMGB2-201ENST00000296503 MYT1Q01538 1121 aa17.03■□□□□ 0.32
HMGB2-201ENST00000296503 ST20-MTHFSA0A0A6YYL1 179 aa17.02■□□□□ 0.32
HMGB2-201ENST00000296503 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
HMGB2-201ENST00000296503 ACEP12821 1306 aa17.02■□□□□ 0.32
HMGB2-201ENST00000296503 LRP6O75581 1613 aa17.01■□□□□ 0.31
HMGB2-201ENST00000296503 CABP1Q9NZU7 370 aa17.01■□□□□ 0.31
HMGB2-201ENST00000296503 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
HMGB2-201ENST00000296503 ILDR2Q71H61 639 aa17.01■□□□□ 0.31
HMGB2-201ENST00000296503 SBNO1A3KN83 1393 aa17.01■□□□□ 0.31
HMGB2-201ENST00000296503 HAP1P54257 671 aaPredicted RBP17■□□□□ 0.31
HMGB2-201ENST00000296503 C8orf37Q96NL8 207 aa17■□□□□ 0.31
HMGB2-201ENST00000296503 ITSN1Q15811 1721 aa17■□□□□ 0.31
HMGB2-201ENST00000296503 PPIP5K1Q6PFW1 1433 aa16.99■□□□□ 0.31
HMGB2-201ENST00000296503 TNS3Q68CZ2 1445 aa16.99■□□□□ 0.31
HMGB2-201ENST00000296503 NGLY1Q96IV0 654 aa16.99■□□□□ 0.31
HMGB2-201ENST00000296503 SBNO2Q9Y2G9 1366 aa16.97■□□□□ 0.31
HMGB2-201ENST00000296503 SLC24A1O60721 1099 aa16.97■□□□□ 0.31
HMGB2-201ENST00000296503 CABLES1Q8TDN4 633 aa16.97■□□□□ 0.31
HMGB2-201ENST00000296503 ARHGEF10O15013 1369 aa16.97■□□□□ 0.31
HMGB2-201ENST00000296503 POLR3AO14802 1390 aaPredicted RBP16.96■□□□□ 0.31
HMGB2-201ENST00000296503 USP47Q96K76 1375 aa16.96■□□□□ 0.31
HMGB2-201ENST00000296503 ZNF772Q68DY9 489 aaPredicted RBP16.96■□□□□ 0.31
HMGB2-201ENST00000296503 AFF2P51816 1311 aa16.95■□□□□ 0.3
HMGB2-201ENST00000296503 POTEAQ6S8J7 498 aa16.95■□□□□ 0.3
HMGB2-201ENST00000296503 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms