RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 POGKQ9P215 609 aa18.52■□□□□ 0.56
NXF1-201ENST00000294172 TULP4Q9NRJ4 1543 aa18.52■□□□□ 0.56
NXF1-201ENST00000294172 PRAM1Q96QH2 718 aa18.52■□□□□ 0.56
NXF1-201ENST00000294172 ESF1Q9H501 851 aaKnown RBP18.52■□□□□ 0.56
NXF1-201ENST00000294172 MINK1Q8N4C8 1332 aaPredicted RBP18.51■□□□□ 0.55
NXF1-201ENST00000294172 PUS7Q96PZ0 661 aaKnown RBP18.51■□□□□ 0.55
NXF1-201ENST00000294172 CGNL1Q0VF96 1302 aa18.51■□□□□ 0.55
NXF1-201ENST00000294172 KIF13AQ9H1H9 1805 aa18.5■□□□□ 0.55
NXF1-201ENST00000294172 YTHDC2Q9H6S0 1430 aaKnown RBP18.49■□□□□ 0.55
NXF1-201ENST00000294172 APAF1O14727 1248 aa18.49■□□□□ 0.55
NXF1-201ENST00000294172 ANKRD36BQ8N2N9 1353 aa18.47■□□□□ 0.55
NXF1-201ENST00000294172 ARHGEF40Q8TER5 1519 aa18.47■□□□□ 0.55
NXF1-201ENST00000294172 GOLGA2Q08379 1002 aa18.47■□□□□ 0.55
NXF1-201ENST00000294172 EXOC6Q8TAG9 804 aa18.47■□□□□ 0.55
NXF1-201ENST00000294172 PLIN1O60240 522 aa18.46■□□□□ 0.55
NXF1-201ENST00000294172 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.55
NXF1-201ENST00000294172 PTPRMP28827 1452 aa18.46■□□□□ 0.55
NXF1-201ENST00000294172 POLR3AO14802 1390 aaPredicted RBP18.46■□□□□ 0.55
NXF1-201ENST00000294172 ALKQ9UM73 1620 aa18.46■□□□□ 0.55
NXF1-201ENST00000294172 ZNF521Q96K83 1311 aa18.45■□□□□ 0.54
NXF1-201ENST00000294172 SPATA31D1Q6ZQQ2 1576 aa18.45■□□□□ 0.54
NXF1-201ENST00000294172 RIMS2Q9UQ26 1411 aa18.44■□□□□ 0.54
NXF1-201ENST00000294172 ZMYM3Q14202 1370 aa18.44■□□□□ 0.54
NXF1-201ENST00000294172 DUSP27Q5VZP5 1158 aa18.44■□□□□ 0.54
NXF1-201ENST00000294172 MTHFSP49914 203 aa18.44■□□□□ 0.54
NXF1-201ENST00000294172 A0A1W2PP64 1363 aa18.42■□□□□ 0.54
NXF1-201ENST00000294172 CDK19Q9BWU1 502 aa18.41■□□□□ 0.54
NXF1-201ENST00000294172 WAPLQ7Z5K2 1190 aa18.41■□□□□ 0.54
NXF1-201ENST00000294172 SLFN5Q08AF3 891 aa18.4■□□□□ 0.54
NXF1-201ENST00000294172 ATAD2Q6PL18 1390 aa18.4■□□□□ 0.54
NXF1-201ENST00000294172 USP32Q8NFA0 1604 aa18.4■□□□□ 0.54
NXF1-201ENST00000294172 CFAP53Q96M91 514 aa18.4■□□□□ 0.54
NXF1-201ENST00000294172 NINLQ9Y2I6 1382 aa18.4■□□□□ 0.54
NXF1-201ENST00000294172 TERF2IPQ9NYB0 399 aa18.39■□□□□ 0.53
NXF1-201ENST00000294172 NSD2O96028 1365 aa18.39■□□□□ 0.53
NXF1-201ENST00000294172 GGNBP2Q9H3C7 697 aa18.39■□□□□ 0.53
NXF1-201ENST00000294172 SPINK5Q9NQ38 1064 aaPredicted RBP18.39■□□□□ 0.53
NXF1-201ENST00000294172 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
NXF1-201ENST00000294172 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.37■□□□□ 0.53
NXF1-201ENST00000294172 CABP1Q9NZU7 370 aa18.37■□□□□ 0.53
NXF1-201ENST00000294172 ABCC11Q96J66 1382 aa18.36■□□□□ 0.53
NXF1-201ENST00000294172 ANP32EQ9BTT0 268 aa18.36■□□□□ 0.53
NXF1-201ENST00000294172 HDGFL2Q7Z4V5 671 aaPredicted RBP18.35■□□□□ 0.53
NXF1-201ENST00000294172 CRBNQ96SW2 442 aa18.35■□□□□ 0.53
NXF1-201ENST00000294172 RRP7AQ9Y3A4 280 aaKnown RBP18.35■□□□□ 0.53
NXF1-201ENST00000294172 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
NXF1-201ENST00000294172 E9PSI1 815 aa18.34■□□□□ 0.53
NXF1-201ENST00000294172 C20orf194Q5TEA3 1177 aa18.34■□□□□ 0.53
NXF1-201ENST00000294172 RUNDC1Q96C34 613 aa18.34■□□□□ 0.53
NXF1-201ENST00000294172 TNRQ92752 1358 aa18.34■□□□□ 0.53
NXF1-201ENST00000294172 TRMT2AQ8IZ69 625 aaKnown RBP18.34■□□□□ 0.53
NXF1-201ENST00000294172 NGEFQ8N5V2 710 aa18.34■□□□□ 0.53
NXF1-201ENST00000294172 SHPRHQ149N8 1683 aa18.33■□□□□ 0.53
NXF1-201ENST00000294172 FYB1O15117 783 aa18.33■□□□□ 0.53
NXF1-201ENST00000294172 U2AF1L5P0DN76 240 aaPredicted RBP18.33■□□□□ 0.52
NXF1-201ENST00000294172 U2AF1Q01081 240 aaKnown RBP eCLIP18.33■□□□□ 0.525e-8■■■□□ 16.5
NXF1-201ENST00000294172 WWC1Q8IX03 1113 aa18.33■□□□□ 0.52
NXF1-201ENST00000294172 METP08581 1390 aa18.33■□□□□ 0.52
NXF1-201ENST00000294172 HDGFP51858 240 aaKnown RBP18.32■□□□□ 0.52
NXF1-201ENST00000294172 TXNDC2Q86VQ3 553 aa18.32■□□□□ 0.52
NXF1-201ENST00000294172 TCP11L2Q8N4U5 519 aa18.32■□□□□ 0.52
NXF1-201ENST00000294172 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
NXF1-201ENST00000294172 DLC1Q96QB1 1528 aa18.3■□□□□ 0.52
NXF1-201ENST00000294172 NKTRP30414 1462 aaKnown RBP18.3■□□□□ 0.52
NXF1-201ENST00000294172 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
NXF1-201ENST00000294172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.29■□□□□ 0.52
NXF1-201ENST00000294172 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.29■□□□□ 0.52
NXF1-201ENST00000294172 CEBPAP49715 358 aaPredicted RBP18.28■□□□□ 0.52
NXF1-201ENST00000294172 SETD1AO15047 1707 aaKnown RBP18.28■□□□□ 0.52
NXF1-201ENST00000294172 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
NXF1-201ENST00000294172 NRXN3Q9Y4C0 1643 aa18.27■□□□□ 0.52
NXF1-201ENST00000294172 TMEM2Q9UHN6 1383 aa18.27■□□□□ 0.51
NXF1-201ENST00000294172 WASLO00401 505 aaPredicted RBP18.26■□□□□ 0.51
NXF1-201ENST00000294172 BCAR3O75815 825 aa18.26■□□□□ 0.51
NXF1-201ENST00000294172 NLRP1Q9C000 1473 aa18.25■□□□□ 0.51
NXF1-201ENST00000294172 FANCIQ9NVI1 1328 aa18.24■□□□□ 0.51
NXF1-201ENST00000294172 IQSEC2Q5JU85 1478 aa18.24■□□□□ 0.51
NXF1-201ENST00000294172 MED14O60244 1454 aa18.22■□□□□ 0.51
NXF1-201ENST00000294172 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
NXF1-201ENST00000294172 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
NXF1-201ENST00000294172 NCKAP5LQ9HCH0 1330 aa18.22■□□□□ 0.51
NXF1-201ENST00000294172 FBLN1P23142 703 aa18.21■□□□□ 0.51
NXF1-201ENST00000294172 WDR63Q8IWG1 891 aa18.21■□□□□ 0.51
NXF1-201ENST00000294172 NUDT16Q96DE0 195 aaKnown RBP18.21■□□□□ 0.51
NXF1-201ENST00000294172 PPIP5K1Q6PFW1 1433 aa18.21■□□□□ 0.51
NXF1-201ENST00000294172 LTKP29376 864 aa18.21■□□□□ 0.51
NXF1-201ENST00000294172 UBR1Q8IWV7 1749 aa18.2■□□□□ 0.5
NXF1-201ENST00000294172 ATP7BP35670 1465 aa18.2■□□□□ 0.5
NXF1-201ENST00000294172 MSH5O43196 834 aa18.2■□□□□ 0.5
NXF1-201ENST00000294172 DIAPH1O60610 1272 aaKnown RBP18.2■□□□□ 0.5
NXF1-201ENST00000294172 TRHP20396 242 aaPredicted RBP18.2■□□□□ 0.5
NXF1-201ENST00000294172 CCDC27Q2M243 656 aa18.2■□□□□ 0.5
NXF1-201ENST00000294172 SIRT1Q96EB6 747 aa18.18■□□□□ 0.5
NXF1-201ENST00000294172 FAM135BQ49AJ0 1406 aa18.18■□□□□ 0.5
NXF1-201ENST00000294172 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
NXF1-201ENST00000294172 COL3A1P02461 1466 aaPredicted RBP18.18■□□□□ 0.5
NXF1-201ENST00000294172 CANXP27824 592 aaKnown RBP18.18■□□□□ 0.5
NXF1-201ENST00000294172 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
NXF1-201ENST00000294172 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
NXF1-201ENST00000294172 SLC26A8Q96RN1 970 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms