RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 EVC2Q86UK5 1308 aa20.67■□□□□ 0.9
NCKIPSD-201ENST00000294129 SETBP1Q9Y6X0 1596 aa20.67■□□□□ 0.9
NCKIPSD-201ENST00000294129 MINK1Q8N4C8 1332 aaPredicted RBP20.67■□□□□ 0.9
NCKIPSD-201ENST00000294129 NOP58Q9Y2X3 529 aaKnown RBP20.66■□□□□ 0.9
NCKIPSD-201ENST00000294129 MYO3AQ8NEV4 1616 aa20.66■□□□□ 0.9
NCKIPSD-201ENST00000294129 CGNL1Q0VF96 1302 aa20.65■□□□□ 0.9
NCKIPSD-201ENST00000294129 GLI2P10070 1586 aa20.65■□□□□ 0.9
NCKIPSD-201ENST00000294129 TCERG1O14776 1098 aaKnown RBP20.64■□□□□ 0.89
NCKIPSD-201ENST00000294129 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.64■□□□□ 0.89
NCKIPSD-201ENST00000294129 PDE4AP27815 886 aa20.63■□□□□ 0.89
NCKIPSD-201ENST00000294129 POGKQ9P215 609 aa20.63■□□□□ 0.89
NCKIPSD-201ENST00000294129 RICTORQ6R327 1708 aa20.62■□□□□ 0.89
NCKIPSD-201ENST00000294129 NEXMIFQ5QGS0 1516 aa20.62■□□□□ 0.89
NCKIPSD-201ENST00000294129 E9PSI1 815 aa20.61■□□□□ 0.89
NCKIPSD-201ENST00000294129 NBR1Q14596 966 aa20.61■□□□□ 0.89
NCKIPSD-201ENST00000294129 TSPOAP1O95153 1857 aa20.61■□□□□ 0.89
NCKIPSD-201ENST00000294129 WWC1Q8IX03 1113 aa20.61■□□□□ 0.89
NCKIPSD-201ENST00000294129 PRAM1Q96QH2 718 aa20.61■□□□□ 0.89
NCKIPSD-201ENST00000294129 SLC52A1Q9NWF4 448 aa20.61■□□□□ 0.89
NCKIPSD-201ENST00000294129 CANXP27824 592 aaKnown RBP20.61■□□□□ 0.89
NCKIPSD-201ENST00000294129 GGNBP2Q9H3C7 697 aa20.6■□□□□ 0.89
NCKIPSD-201ENST00000294129 POLR3AO14802 1390 aaPredicted RBP20.6■□□□□ 0.89
NCKIPSD-201ENST00000294129 MYO5BQ9ULV0 1848 aa20.6■□□□□ 0.89
NCKIPSD-201ENST00000294129 TCP11L2Q8N4U5 519 aa20.6■□□□□ 0.89
NCKIPSD-201ENST00000294129 ZC3H13Q5T200 1668 aaKnown RBP20.59■□□□□ 0.89
NCKIPSD-201ENST00000294129 U2AF1L5P0DN76 240 aaPredicted RBP20.59■□□□□ 0.89
NCKIPSD-201ENST00000294129 U2AF1Q01081 240 aaKnown RBP eCLIP20.59■□□□□ 0.89
NCKIPSD-201ENST00000294129 NKTRP30414 1462 aaKnown RBP20.59■□□□□ 0.89
NCKIPSD-201ENST00000294129 IPO9Q96P70 1041 aaKnown RBP20.58■□□□□ 0.89
NCKIPSD-201ENST00000294129 FRAT1Q92837 279 aaPredicted RBP20.58■□□□□ 0.89
NCKIPSD-201ENST00000294129 CFAP53Q96M91 514 aa20.58■□□□□ 0.89
NCKIPSD-201ENST00000294129 TULP4Q9NRJ4 1543 aa20.58■□□□□ 0.88
NCKIPSD-201ENST00000294129 TRMT2AQ8IZ69 625 aaKnown RBP20.58■□□□□ 0.88
NCKIPSD-201ENST00000294129 PIK3C2BO00750 1634 aa20.57■□□□□ 0.88
NCKIPSD-201ENST00000294129 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
NCKIPSD-201ENST00000294129 RUNDC1Q96C34 613 aa20.56■□□□□ 0.88
NCKIPSD-201ENST00000294129 BCL2L13Q9BXK5 485 aa20.56■□□□□ 0.88
NCKIPSD-201ENST00000294129 U2SURPO15042 1029 aaKnown RBP20.56■□□□□ 0.88
NCKIPSD-201ENST00000294129 ARHGEF28Q8N1W1 1705 aaKnown RBP20.56■□□□□ 0.88
NCKIPSD-201ENST00000294129 RGS3P49796 1198 aa20.55■□□□□ 0.88
NCKIPSD-201ENST00000294129 BACH2Q9BYV9 841 aa20.55■□□□□ 0.88
NCKIPSD-201ENST00000294129 ANKRD36BQ8N2N9 1353 aa20.55■□□□□ 0.88
NCKIPSD-201ENST00000294129 ARHGAP31Q2M1Z3 1444 aa20.53■□□□□ 0.88
NCKIPSD-201ENST00000294129 A0A1W2PP64 1363 aa20.53■□□□□ 0.88
NCKIPSD-201ENST00000294129 PANK1Q8TE04 598 aa20.53■□□□□ 0.88
NCKIPSD-201ENST00000294129 COG6Q9Y2V7 657 aa20.52■□□□□ 0.87
NCKIPSD-201ENST00000294129 CENPQQ7L2Z9 268 aaPredicted RBP20.51■□□□□ 0.87
NCKIPSD-201ENST00000294129 PREX1Q8TCU6 1659 aa20.51■□□□□ 0.87
NCKIPSD-201ENST00000294129 KDM2BQ8NHM5 1336 aa20.5■□□□□ 0.87
NCKIPSD-201ENST00000294129 MS4A1P11836 297 aa20.5■□□□□ 0.87
NCKIPSD-201ENST00000294129 WAPLQ7Z5K2 1190 aa20.5■□□□□ 0.87
NCKIPSD-201ENST00000294129 SHPRHQ149N8 1683 aa20.49■□□□□ 0.87
NCKIPSD-201ENST00000294129 PPM1GO15355 546 aaPredicted RBP20.49■□□□□ 0.87
NCKIPSD-201ENST00000294129 FBLN1P23142 703 aa20.48■□□□□ 0.87
NCKIPSD-201ENST00000294129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.48■□□□□ 0.87
NCKIPSD-201ENST00000294129 CDK19Q9BWU1 502 aa20.48■□□□□ 0.87
NCKIPSD-201ENST00000294129 CABP1Q9NZU7 370 aa20.48■□□□□ 0.87
NCKIPSD-201ENST00000294129 YTHDC2Q9H6S0 1430 aaKnown RBP20.48■□□□□ 0.87
NCKIPSD-201ENST00000294129 CLUAP1Q96AJ1 413 aa20.47■□□□□ 0.87
NCKIPSD-201ENST00000294129 TNNQ9UQP3 1299 aa20.47■□□□□ 0.87
NCKIPSD-201ENST00000294129 TMEM131LA2VDJ0 1609 aa20.47■□□□□ 0.87
NCKIPSD-201ENST00000294129 TERF2IPQ9NYB0 399 aa20.46■□□□□ 0.87
NCKIPSD-201ENST00000294129 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
NCKIPSD-201ENST00000294129 FYB1O15117 783 aa20.45■□□□□ 0.86
NCKIPSD-201ENST00000294129 TSR2Q969E8 191 aaKnown RBP20.44■□□□□ 0.86
NCKIPSD-201ENST00000294129 PTPRMP28827 1452 aa20.44■□□□□ 0.86
NCKIPSD-201ENST00000294129 RIMBP3CA6NJZ7 1639 aa20.43■□□□□ 0.86
NCKIPSD-201ENST00000294129 RIMBP3BA6NNM3 1639 aa20.43■□□□□ 0.86
NCKIPSD-201ENST00000294129 RIMBP3Q9UFD9 1639 aa20.43■□□□□ 0.86
NCKIPSD-201ENST00000294129 ZFYVE9O95405 1425 aa20.43■□□□□ 0.86
NCKIPSD-201ENST00000294129 IGHDP01880 384 aa20.43■□□□□ 0.86
NCKIPSD-201ENST00000294129 HDGFL2Q7Z4V5 671 aaPredicted RBP20.43■□□□□ 0.86
NCKIPSD-201ENST00000294129 PUS7Q96PZ0 661 aaKnown RBP20.43■□□□□ 0.86
NCKIPSD-201ENST00000294129 RARSP54136 660 aaKnown RBP20.42■□□□□ 0.86
NCKIPSD-201ENST00000294129 ESF1Q9H501 851 aaKnown RBP20.42■□□□□ 0.86
NCKIPSD-201ENST00000294129 LAS1LQ9Y4W2 734 aaKnown RBP20.42■□□□□ 0.86
NCKIPSD-201ENST00000294129 ABCC11Q96J66 1382 aa20.41■□□□□ 0.86
NCKIPSD-201ENST00000294129 NSD2O96028 1365 aa20.41■□□□□ 0.86
NCKIPSD-201ENST00000294129 ATAD2Q6PL18 1390 aa20.41■□□□□ 0.86
NCKIPSD-201ENST00000294129 DEKP35659 375 aaKnown RBP20.41■□□□□ 0.86
NCKIPSD-201ENST00000294129 DIP2BQ9P265 1576 aa20.4■□□□□ 0.86
NCKIPSD-201ENST00000294129 MAPK8IP3Q9UPT6 1336 aa20.4■□□□□ 0.86
NCKIPSD-201ENST00000294129 WDR63Q8IWG1 891 aa20.39■□□□□ 0.85
NCKIPSD-201ENST00000294129 ALKQ9UM73 1620 aa20.39■□□□□ 0.85
NCKIPSD-201ENST00000294129 IQSEC2Q5JU85 1478 aa20.39■□□□□ 0.85
NCKIPSD-201ENST00000294129 RLBP1P12271 317 aa20.39■□□□□ 0.85
NCKIPSD-201ENST00000294129 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
NCKIPSD-201ENST00000294129 USP32Q8NFA0 1604 aa20.38■□□□□ 0.85
NCKIPSD-201ENST00000294129 CLTCQ00610 1675 aaKnown RBP20.38■□□□□ 0.85
NCKIPSD-201ENST00000294129 PDE3AQ14432 1141 aa20.38■□□□□ 0.85
NCKIPSD-201ENST00000294129 MYH16Q9H6N6 1097 aa20.37■□□□□ 0.85
NCKIPSD-201ENST00000294129 SLC4A3P48751 1232 aa20.37■□□□□ 0.85
NCKIPSD-201ENST00000294129 TXNDC2Q86VQ3 553 aa20.37■□□□□ 0.85
NCKIPSD-201ENST00000294129 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
NCKIPSD-201ENST00000294129 TMPOP42166 694 aaKnown RBP20.35■□□□□ 0.85
NCKIPSD-201ENST00000294129 NCKAP5LQ9HCH0 1330 aa20.35■□□□□ 0.85
NCKIPSD-201ENST00000294129 RIMS2Q9UQ26 1411 aa20.35■□□□□ 0.85
NCKIPSD-201ENST00000294129 DIAPH1O60610 1272 aaKnown RBP20.34■□□□□ 0.85
NCKIPSD-201ENST00000294129 CD163L1Q9NR16 1453 aa20.34■□□□□ 0.85
NCKIPSD-201ENST00000294129 FAM161AQ3B820 660 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms