RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CCDC39Q9UFE4 941 aa19.5■□□□□ 0.71
SSRP1-202ENST00000293880 HOOK1Q9UJC3 728 aaKnown RBP19.5■□□□□ 0.71
SSRP1-202ENST00000293880 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
SSRP1-202ENST00000293880 MEX3CQ5U5Q3 659 aaKnown RBP19.49■□□□□ 0.71
SSRP1-202ENST00000293880 AEBP1Q8IUX7 1158 aa19.49■□□□□ 0.71
SSRP1-202ENST00000293880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.49■□□□□ 0.716e-7■■■■■ 46.8
SSRP1-202ENST00000293880 DHX57Q6P158 1386 aaKnown RBP19.49■□□□□ 0.71
SSRP1-202ENST00000293880 ATAD2BQ9ULI0 1458 aa19.49■□□□□ 0.71
SSRP1-202ENST00000293880 ERICH2A1L162 156 aa19.48■□□□□ 0.71
SSRP1-202ENST00000293880 NEXNQ0ZGT2 675 aa19.48■□□□□ 0.71
SSRP1-202ENST00000293880 SMC2O95347 1197 aa19.48■□□□□ 0.71
SSRP1-202ENST00000293880 HSP90AB2PQ58FF8 381 aa19.48■□□□□ 0.71
SSRP1-202ENST00000293880 ARGLU1Q9NWB6 273 aaPredicted RBP19.48■□□□□ 0.71
SSRP1-202ENST00000293880 CCDC144AA2RUR9 1427 aa19.48■□□□□ 0.71
SSRP1-202ENST00000293880 CEBPZQ03701 1054 aaKnown RBP19.48■□□□□ 0.71
SSRP1-202ENST00000293880 CNKSR2Q8WXI2 1034 aa19.48■□□□□ 0.71
SSRP1-202ENST00000293880 G3BP1Q13283 466 aaKnown RBP eCLIP19.47■□□□□ 0.716e-7■■■■□ 21
SSRP1-202ENST00000293880 TRDNQ13061 729 aa19.47■□□□□ 0.71
SSRP1-202ENST00000293880 CT47A1Q5JQC4 288 aaPredicted RBP19.47■□□□□ 0.71
SSRP1-202ENST00000293880 NEUROD6Q96NK8 337 aa19.47■□□□□ 0.71
SSRP1-202ENST00000293880 CCDC191Q8NCU4 936 aa19.47■□□□□ 0.71
SSRP1-202ENST00000293880 CCDC73Q6ZRK6 1079 aa19.47■□□□□ 0.71
SSRP1-202ENST00000293880 ZFYVE27Q5T4F4 411 aa19.46■□□□□ 0.71
SSRP1-202ENST00000293880 CPLX2Q6PUV4 134 aaKnown RBP19.46■□□□□ 0.71
SSRP1-202ENST00000293880 STK11IPQ8N1F8 1099 aa19.46■□□□□ 0.71
SSRP1-202ENST00000293880 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
SSRP1-202ENST00000293880 C1orf115Q9H7X2 142 aa19.46■□□□□ 0.71
SSRP1-202ENST00000293880 RBM25P49756 843 aaKnown RBP19.46■□□□□ 0.71
SSRP1-202ENST00000293880 FAM69CQ0P6D2 419 aa19.45■□□□□ 0.7
SSRP1-202ENST00000293880 WASHC4Q2M389 1173 aa19.45■□□□□ 0.7
SSRP1-202ENST00000293880 DIAPH1O60610 1272 aaKnown RBP19.45■□□□□ 0.7
SSRP1-202ENST00000293880 BRPF1P55201 1214 aaPredicted RBP19.45■□□□□ 0.7
SSRP1-202ENST00000293880 EPS15P42566 896 aa19.45■□□□□ 0.7
SSRP1-202ENST00000293880 OLFM4Q6UX06 510 aa19.45■□□□□ 0.7
SSRP1-202ENST00000293880 RNF20Q5VTR2 975 aa19.45■□□□□ 0.7
SSRP1-202ENST00000293880 HSP90B2PQ58FF3 399 aa19.44■□□□□ 0.7
SSRP1-202ENST00000293880 CCDC43Q96MW1 224 aaKnown RBP19.44■□□□□ 0.7
SSRP1-202ENST00000293880 TSPYL1Q9H0U9 437 aa19.43■□□□□ 0.7
SSRP1-202ENST00000293880 PRPF40AO75400 957 aaKnown RBP19.43■□□□□ 0.7
SSRP1-202ENST00000293880 NUTM2GQ5VZR2 741 aa19.43■□□□□ 0.7
SSRP1-202ENST00000293880 TSPYL4Q9UJ04 414 aa19.43■□□□□ 0.7
SSRP1-202ENST00000293880 FMNL2Q96PY5 1086 aa19.43■□□□□ 0.7
SSRP1-202ENST00000293880 EVC2Q86UK5 1308 aa19.42■□□□□ 0.7
SSRP1-202ENST00000293880 NUCB2P80303 420 aa19.42■□□□□ 0.7
SSRP1-202ENST00000293880 CWC15Q9P013 229 aaKnown RBP19.42■□□□□ 0.7
SSRP1-202ENST00000293880 RAPGEF2Q9Y4G8 1499 aa19.42■□□□□ 0.7
SSRP1-202ENST00000293880 TRAK2O60296 914 aa19.42■□□□□ 0.7
SSRP1-202ENST00000293880 PTPRGP23470 1445 aa19.42■□□□□ 0.7
SSRP1-202ENST00000293880 CCDC66A2RUB6 948 aa19.42■□□□□ 0.7
SSRP1-202ENST00000293880 MAP4K4O95819 1239 aaPredicted RBP19.42■□□□□ 0.7
SSRP1-202ENST00000293880 ODF2Q5BJF6 829 aa19.41■□□□□ 0.7
SSRP1-202ENST00000293880 IBSPP21815 317 aaPredicted RBP19.41■□□□□ 0.7
SSRP1-202ENST00000293880 TRIM5Q9C035 493 aa19.41■□□□□ 0.7
SSRP1-202ENST00000293880 TSPY26PQ9H489 355 aa19.41■□□□□ 0.7
SSRP1-202ENST00000293880 ERICH4A6NGS2 130 aa19.41■□□□□ 0.7
SSRP1-202ENST00000293880 DNAJC2Q99543 621 aaKnown RBP19.4■□□□□ 0.7
SSRP1-202ENST00000293880 ATP2B1P20020 1258 aa19.4■□□□□ 0.7
SSRP1-202ENST00000293880 ACBD3Q9H3P7 528 aa19.4■□□□□ 0.7
SSRP1-202ENST00000293880 PRDM10Q9NQV6 1147 aa19.4■□□□□ 0.7
SSRP1-202ENST00000293880 CHMP4CQ96CF2 233 aa19.39■□□□□ 0.7
SSRP1-202ENST00000293880 KLHL34Q8N239 644 aa19.39■□□□□ 0.69
SSRP1-202ENST00000293880 LRRFIP1Q32MZ4 808 aaKnown RBP19.39■□□□□ 0.69
SSRP1-202ENST00000293880 CDC45O75419 566 aa19.38■□□□□ 0.69
SSRP1-202ENST00000293880 MRE11P49959 708 aa19.38■□□□□ 0.69
SSRP1-202ENST00000293880 FAM177BA6PVY3 158 aa19.38■□□□□ 0.69
SSRP1-202ENST00000293880 STK3Q13188 491 aa19.37■□□□□ 0.69
SSRP1-202ENST00000293880 SAFBQ15424 915 aaKnown RBP eCLIP19.37■□□□□ 0.69
SSRP1-202ENST00000293880 RIC3Q7Z5B4 369 aa19.37■□□□□ 0.69
SSRP1-202ENST00000293880 RUNDC1Q96C34 613 aa19.37■□□□□ 0.69
SSRP1-202ENST00000293880 API5Q9BZZ5 524 aaKnown RBP19.37■□□□□ 0.69
SSRP1-202ENST00000293880 ROCK1Q13464 1354 aa19.37■□□□□ 0.69
SSRP1-202ENST00000293880 KRI1Q8N9T8 703 aaKnown RBP19.37■□□□□ 0.69
SSRP1-202ENST00000293880 CCDC18Q5T9S5 1454 aa19.37■□□□□ 0.69
SSRP1-202ENST00000293880 NAT10Q9H0A0 1025 aaKnown RBP19.36■□□□□ 0.69
SSRP1-202ENST00000293880 ZNF526Q8TF50 670 aaPredicted RBP19.36■□□□□ 0.69
SSRP1-202ENST00000293880 CWC22Q9HCG8 908 aaKnown RBP19.36■□□□□ 0.69
SSRP1-202ENST00000293880 SDF4Q9BRK5 362 aa19.35■□□□□ 0.69
SSRP1-202ENST00000293880 CDR1P51861 262 aa19.35■□□□□ 0.69
SSRP1-202ENST00000293880 RALYLQ86SE5 291 aaKnown RBP19.35■□□□□ 0.69
SSRP1-202ENST00000293880 CDCA7LQ96GN5 454 aa19.35■□□□□ 0.69
SSRP1-202ENST00000293880 FSD1Q9BTV5 496 aa19.34■□□□□ 0.69
SSRP1-202ENST00000293880 ERC2O15083 957 aa19.34■□□□□ 0.69
SSRP1-202ENST00000293880 FAM177A1Q8N128 213 aaPredicted RBP19.34■□□□□ 0.69
SSRP1-202ENST00000293880 FIBPO43427 364 aa19.34■□□□□ 0.69
SSRP1-202ENST00000293880 AXDND1Q5T1B0 1012 aaPredicted RBP19.33■□□□□ 0.69
SSRP1-202ENST00000293880 LEKR1Q6ZMV7 388 aa19.33■□□□□ 0.69
SSRP1-202ENST00000293880 DDX58O95786 925 aaKnown RBP19.33■□□□□ 0.69
SSRP1-202ENST00000293880 NINLQ9Y2I6 1382 aa19.33■□□□□ 0.69
SSRP1-202ENST00000293880 OFD1O75665 1012 aa19.33■□□□□ 0.68
SSRP1-202ENST00000293880 SMARCA4P51532 1647 aa19.33■□□□□ 0.68
SSRP1-202ENST00000293880 FAM193AP78312 1265 aa19.33■□□□□ 0.68
SSRP1-202ENST00000293880 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.32■□□□□ 0.68
SSRP1-202ENST00000293880 CABP2Q9NPB3 220 aa19.32■□□□□ 0.68
SSRP1-202ENST00000293880 GGNBP2Q9H3C7 697 aa19.31■□□□□ 0.68
SSRP1-202ENST00000293880 CNTROBQ8N137 903 aa19.31■□□□□ 0.68
SSRP1-202ENST00000293880 UBTFL1P0CB47 393 aaPredicted RBP19.3■□□□□ 0.68
SSRP1-202ENST00000293880 IKQ13123 557 aaPredicted RBP19.3■□□□□ 0.68
SSRP1-202ENST00000293880 BRMS1Q9HCU9 246 aa19.3■□□□□ 0.68
SSRP1-202ENST00000293880 PSME1Q06323 249 aa19.3■□□□□ 0.68
SSRP1-202ENST00000293880 RBM33Q96EV2 1170 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms