RNA–Protein interactions for RNA: ENST00000291574.8

TRAPPC10-201, Transcript of trafficking protein particle complex 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC10, Length 6,976 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-201ENST00000291574 G3BP1Q13283 466 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRAPPC10-201ENST00000291574 NBPF1Q3BBV0 1214 aa16.46■□□□□ 0.23
TRAPPC10-201ENST00000291574 VPS53Q5VIR6 699 aa16.46■□□□□ 0.23
TRAPPC10-201ENST00000291574 LRRC9Q6ZRR7 1453 aa16.46■□□□□ 0.23
TRAPPC10-201ENST00000291574 TPM2P07951 284 aa16.46■□□□□ 0.23
TRAPPC10-201ENST00000291574 PDE3AQ14432 1141 aa16.46■□□□□ 0.23
TRAPPC10-201ENST00000291574 PCMTD1Q96MG8 357 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC10-201ENST00000291574 TMEM132EQ6IEE7 984 aa16.45■□□□□ 0.22
TRAPPC10-201ENST00000291574 CCDC70Q6NSX1 233 aa16.45■□□□□ 0.22
TRAPPC10-201ENST00000291574 SKAP1Q86WV1 359 aa16.45■□□□□ 0.22
TRAPPC10-201ENST00000291574 TRIM5Q9C035 493 aa16.45■□□□□ 0.22
TRAPPC10-201ENST00000291574 TSR2Q969E8 191 aaKnown RBP16.45■□□□□ 0.22
TRAPPC10-201ENST00000291574 PATL2C9JE40 543 aaKnown RBP16.45■□□□□ 0.22
TRAPPC10-201ENST00000291574 MBD3O95983 291 aa16.45■□□□□ 0.22
TRAPPC10-201ENST00000291574 GRPEL1Q9HAV7 217 aa16.45■□□□□ 0.22
TRAPPC10-201ENST00000291574 CCDC173Q0VFZ6 552 aa16.44■□□□□ 0.22
TRAPPC10-201ENST00000291574 FIBPO43427 364 aa16.44■□□□□ 0.22
TRAPPC10-201ENST00000291574 MTERF4Q7Z6M4 381 aaKnown RBP16.44■□□□□ 0.22
TRAPPC10-201ENST00000291574 SDF4Q9BRK5 362 aa16.44■□□□□ 0.22
TRAPPC10-201ENST00000291574 CABP2Q9NPB3 220 aa16.44■□□□□ 0.22
TRAPPC10-201ENST00000291574 PKNOX2Q96KN3 472 aa16.44■□□□□ 0.22
TRAPPC10-201ENST00000291574 ARGLU1Q9NWB6 273 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC10-201ENST00000291574 ATAD2BQ9ULI0 1458 aa16.43■□□□□ 0.22
TRAPPC10-201ENST00000291574 MIA2Q96PC5 1412 aa16.43■□□□□ 0.22
TRAPPC10-201ENST00000291574 TSPY26PQ9H489 355 aa16.42■□□□□ 0.22
TRAPPC10-201ENST00000291574 ERC2O15083 957 aa16.42■□□□□ 0.22
TRAPPC10-201ENST00000291574 TRDNQ13061 729 aa16.42■□□□□ 0.22
TRAPPC10-201ENST00000291574 SPC24Q8NBT2 197 aa16.42■□□□□ 0.22
TRAPPC10-201ENST00000291574 ANKRD50Q9ULJ7 1429 aa16.42■□□□□ 0.22
TRAPPC10-201ENST00000291574 RABEP1Q15276 862 aa16.42■□□□□ 0.22
TRAPPC10-201ENST00000291574 LRRFIP1Q32MZ4 808 aaKnown RBP16.42■□□□□ 0.22
TRAPPC10-201ENST00000291574 MCM4P33991 863 aa16.41■□□□□ 0.22
TRAPPC10-201ENST00000291574 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC10-201ENST00000291574 ESPNB1AK53 854 aa16.41■□□□□ 0.22
TRAPPC10-201ENST00000291574 ANKRD20A12PQ8NF67 263 aa16.41■□□□□ 0.22
TRAPPC10-201ENST00000291574 FMNL2Q96PY5 1086 aa16.41■□□□□ 0.22
TRAPPC10-201ENST00000291574 UBTFL1P0CB47 393 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC10-201ENST00000291574 CFAP70Q5T0N1 1121 aa16.41■□□□□ 0.22
TRAPPC10-201ENST00000291574 SMG6Q86US8 1419 aaKnown RBP16.4■□□□□ 0.22
TRAPPC10-201ENST00000291574 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
TRAPPC10-201ENST00000291574 NOB1Q9ULX3 412 aaKnown RBP16.4■□□□□ 0.22
TRAPPC10-201ENST00000291574 HSP90AB4PQ58FF6 505 aa16.4■□□□□ 0.22
TRAPPC10-201ENST00000291574 SURF6O75683 361 aaKnown RBP16.39■□□□□ 0.22
TRAPPC10-201ENST00000291574 NFXL1Q6ZNB6 911 aa16.39■□□□□ 0.22
TRAPPC10-201ENST00000291574 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
TRAPPC10-201ENST00000291574 WWC1Q8IX03 1113 aa16.38■□□□□ 0.21
TRAPPC10-201ENST00000291574 PDILTQ8N807 584 aa16.38■□□□□ 0.21
TRAPPC10-201ENST00000291574 AIMP1Q12904 312 aaKnown RBP16.38■□□□□ 0.21
TRAPPC10-201ENST00000291574 NEUROD6Q96NK8 337 aa16.38■□□□□ 0.21
TRAPPC10-201ENST00000291574 HOOK1Q9UJC3 728 aaKnown RBP16.38■□□□□ 0.21
TRAPPC10-201ENST00000291574 PTPRGP23470 1445 aa16.38■□□□□ 0.21
TRAPPC10-201ENST00000291574 PRKAR2BP31323 418 aa16.38■□□□□ 0.21
TRAPPC10-201ENST00000291574 HMGN5P82970 282 aaKnown RBP16.38■□□□□ 0.21
TRAPPC10-201ENST00000291574 RRBP1Q9P2E9 1410 aaKnown RBP16.38■□□□□ 0.21
TRAPPC10-201ENST00000291574 HSP90B2PQ58FF3 399 aa16.37■□□□□ 0.21
TRAPPC10-201ENST00000291574 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
TRAPPC10-201ENST00000291574 K7ELQ4 463 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC10-201ENST00000291574 KDM4AO75164 1064 aa16.37■□□□□ 0.21
TRAPPC10-201ENST00000291574 NCOA2Q15596 1464 aa16.36■□□□□ 0.21
TRAPPC10-201ENST00000291574 CEBPZQ03701 1054 aaKnown RBP16.36■□□□□ 0.21
TRAPPC10-201ENST00000291574 TWISTNBQ3B726 338 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC10-201ENST00000291574 TTLL5Q6EMB2 1281 aa16.36■□□□□ 0.21
TRAPPC10-201ENST00000291574 CLASRPQ8N2M8 674 aaKnown RBP16.36■□□□□ 0.21
TRAPPC10-201ENST00000291574 GCC1Q96CN9 775 aa16.36■□□□□ 0.21
TRAPPC10-201ENST00000291574 RALYLQ86SE5 291 aaKnown RBP16.35■□□□□ 0.21
TRAPPC10-201ENST00000291574 NAT10Q9H0A0 1025 aaKnown RBP16.35■□□□□ 0.21
TRAPPC10-201ENST00000291574 CNTROBQ8N137 903 aa16.35■□□□□ 0.21
TRAPPC10-201ENST00000291574 FSD1Q9BTV5 496 aa16.35■□□□□ 0.21
TRAPPC10-201ENST00000291574 SLC12A5Q9H2X9 1139 aa16.35■□□□□ 0.21
TRAPPC10-201ENST00000291574 G3V3G9 751 aa16.35■□□□□ 0.21
TRAPPC10-201ENST00000291574 DCAF8Q5TAQ9 597 aa16.35■□□□□ 0.21
TRAPPC10-201ENST00000291574 MCM2P49736 904 aa16.35■□□□□ 0.21
TRAPPC10-201ENST00000291574 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC10-201ENST00000291574 WASHC4Q2M389 1173 aa16.34■□□□□ 0.21
TRAPPC10-201ENST00000291574 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
TRAPPC10-201ENST00000291574 KINO60870 393 aaKnown RBP16.34■□□□□ 0.21
TRAPPC10-201ENST00000291574 SMC2O95347 1197 aa16.34■□□□□ 0.21
TRAPPC10-201ENST00000291574 SMARCA4P51532 1647 aa16.33■□□□□ 0.21
TRAPPC10-201ENST00000291574 LETM1O95202 739 aaPredicted RBP16.33■□□□□ 0.21
TRAPPC10-201ENST00000291574 UQCRHLA0A096LP55 91 aa16.33■□□□□ 0.2
TRAPPC10-201ENST00000291574 UQCRHP07919 91 aa16.33■□□□□ 0.2
TRAPPC10-201ENST00000291574 SAFBQ15424 915 aaKnown RBP eCLIP16.33■□□□□ 0.23e-6■■■□□ 19.1
TRAPPC10-201ENST00000291574 RAD21O60216 631 aa16.33■□□□□ 0.2
TRAPPC10-201ENST00000291574 GNAI3P08754 354 aa16.33■□□□□ 0.2
TRAPPC10-201ENST00000291574 PSMA5P28066 241 aa16.33■□□□□ 0.2
TRAPPC10-201ENST00000291574 RUFY1Q96T51 708 aa16.33■□□□□ 0.2
TRAPPC10-201ENST00000291574 MVPQ14764 893 aaKnown RBP16.33■□□□□ 0.2
TRAPPC10-201ENST00000291574 ATF7IPQ6VMQ6 1270 aa16.33■□□□□ 0.2
TRAPPC10-201ENST00000291574 NAP1L1P55209 391 aaKnown RBP16.32■□□□□ 0.2
TRAPPC10-201ENST00000291574 RIC3Q7Z5B4 369 aa16.32■□□□□ 0.2
TRAPPC10-201ENST00000291574 CCDC47Q96A33 483 aaKnown RBP16.32■□□□□ 0.2
TRAPPC10-201ENST00000291574 ATP2B1P20020 1258 aa16.32■□□□□ 0.2
TRAPPC10-201ENST00000291574 C20orf194Q5TEA3 1177 aa16.32■□□□□ 0.2
TRAPPC10-201ENST00000291574 STAC3Q96MF2 364 aa16.32■□□□□ 0.2
TRAPPC10-201ENST00000291574 NUTM2GQ5VZR2 741 aa16.32■□□□□ 0.2
TRAPPC10-201ENST00000291574 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
TRAPPC10-201ENST00000291574 OLFM4Q6UX06 510 aa16.31■□□□□ 0.2
TRAPPC10-201ENST00000291574 CUX1P39880 1505 aa16.31■□□□□ 0.2
TRAPPC10-201ENST00000291574 DHX16O60231 1041 aaKnown RBP16.31■□□□□ 0.2
TRAPPC10-201ENST00000291574 PRKCSHP14314 528 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms