RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 DLC1Q96QB1 1528 aa36.23■■■■□ 3.39
PDF-201ENST00000288022 CDC42BPGQ6DT37 1551 aa36.23■■■■□ 3.39
PDF-201ENST00000288022 POGKQ9P215 609 aa36.22■■■■□ 3.39
PDF-201ENST00000288022 SAFB2Q14151 953 aaKnown RBP eCLIP36.21■■■■□ 3.39
PDF-201ENST00000288022 KIAA1210Q9ULL0 1709 aa36.21■■■■□ 3.39
PDF-201ENST00000288022 C1orf167Q5SNV9 1468 aa36.19■■■■□ 3.38
PDF-201ENST00000288022 AHDC1Q5TGY3 1603 aaPredicted RBP36.15■■■■□ 3.38
PDF-201ENST00000288022 TONSLQ96HA7 1378 aa36.13■■■■□ 3.37
PDF-201ENST00000288022 NUTM2FA1L443 756 aa36.11■■■■□ 3.37
PDF-201ENST00000288022 NBPF1Q3BBV0 1214 aa36.11■■■■□ 3.37
PDF-201ENST00000288022 COL16A1Q07092 1604 aaPredicted RBP36.11■■■■□ 3.37
PDF-201ENST00000288022 ORAI2Q96SN7 254 aa36.1■■■■□ 3.37
PDF-201ENST00000288022 ARHGEF28Q8N1W1 1705 aaKnown RBP36.09■■■■□ 3.37
PDF-201ENST00000288022 DISP3Q9P2K9 1392 aa36.09■■■■□ 3.37
PDF-201ENST00000288022 FMN2Q9NZ56 1722 aa36.08■■■■□ 3.37
PDF-201ENST00000288022 NHSL1Q5SYE7 1610 aa36.07■■■■□ 3.36
PDF-201ENST00000288022 MED1Q15648 1581 aaPredicted RBP36.06■■■■□ 3.36
PDF-201ENST00000288022 ESCO1Q5FWF5 840 aa36.06■■■■□ 3.36
PDF-201ENST00000288022 MINK1Q8N4C8 1332 aaPredicted RBP36.05■■■■□ 3.36
PDF-201ENST00000288022 DDX17Q92841 729 aaKnown RBP36.04■■■■□ 3.36
PDF-201ENST00000288022 TRPM1Q7Z4N2 1603 aa36.04■■■■□ 3.36
PDF-201ENST00000288022 HIRIP3Q9BW71 556 aaPredicted RBP36.03■■■■□ 3.36
PDF-201ENST00000288022 JCADQ9P266 1359 aa36.02■■■■□ 3.36
PDF-201ENST00000288022 ADGRB2O60241 1585 aa36.01■■■■□ 3.35
PDF-201ENST00000288022 ROCK2O75116 1388 aaKnown RBP35.97■■■■□ 3.35
PDF-201ENST00000288022 NBPF8Q3BBV2 869 aa35.96■■■■□ 3.35
PDF-201ENST00000288022 LRRC59Q96AG4 307 aaKnown RBP35.93■■■■□ 3.34
PDF-201ENST00000288022 RGPD8O14715 1765 aaPredicted RBP35.92■■■■□ 3.34
PDF-201ENST00000288022 SHPRHQ149N8 1683 aa35.91■■■■□ 3.34
PDF-201ENST00000288022 NPHP3Q7Z494 1330 aa35.9■■■■□ 3.34
PDF-201ENST00000288022 WASLO00401 505 aaPredicted RBP35.9■■■■□ 3.34
PDF-201ENST00000288022 FOXO3O43524 673 aa35.9■■■■□ 3.34
PDF-201ENST00000288022 PHF23Q9BUL5 403 aaPredicted RBP35.9■■■■□ 3.34
PDF-201ENST00000288022 KIF1AQ12756 1690 aa35.9■■■■□ 3.34
PDF-201ENST00000288022 EIF3AQ14152 1382 aaKnown RBP35.89■■■■□ 3.34
PDF-201ENST00000288022 ANKARQ7Z5J8 1434 aa35.88■■■■□ 3.33
PDF-201ENST00000288022 SOS2Q07890 1332 aaPredicted RBP35.87■■■■□ 3.33
PDF-201ENST00000288022 CLSPNQ9HAW4 1339 aa35.87■■■■□ 3.33
PDF-201ENST00000288022 CENPJQ9HC77 1338 aaPredicted RBP35.87■■■■□ 3.33
PDF-201ENST00000288022 USP32Q8NFA0 1604 aa35.86■■■■□ 3.33
PDF-201ENST00000288022 PHF8Q9UPP1 1060 aa35.86■■■■□ 3.33
PDF-201ENST00000288022 TULP4Q9NRJ4 1543 aa35.86■■■■□ 3.33
PDF-201ENST00000288022 SPATA31A6Q5VVP1 1343 aa35.85■■■■□ 3.33
PDF-201ENST00000288022 XPCQ01831 940 aaPredicted RBP35.85■■■■□ 3.33
PDF-201ENST00000288022 CCER1Q8TC90 406 aaPredicted RBP35.85■■■■□ 3.33
PDF-201ENST00000288022 QRICH2Q9H0J4 1663 aa35.82■■■■□ 3.33
PDF-201ENST00000288022 RALGAPBQ86X10 1494 aa35.8■■■■□ 3.32
PDF-201ENST00000288022 PXDNQ92626 1479 aa35.8■■■■□ 3.32
PDF-201ENST00000288022 PNPLA6Q8IY17 1366 aa35.8■■■■□ 3.32
PDF-201ENST00000288022 PRR36Q9H6K5 1346 aa35.8■■■■□ 3.32
PDF-201ENST00000288022 GPRASP1Q5JY77 1395 aa35.79■■■■□ 3.32
PDF-201ENST00000288022 NUTM2BA6NNL0 878 aaPredicted RBP35.79■■■■□ 3.32
PDF-201ENST00000288022 NUTM2EB1AL46 878 aaPredicted RBP35.79■■■■□ 3.32
PDF-201ENST00000288022 NUTM2AQ8IVF1 878 aaPredicted RBP35.79■■■■□ 3.32
PDF-201ENST00000288022 PMFBP1Q8TBY8 1022 aa35.79■■■■□ 3.32
PDF-201ENST00000288022 CDK19Q9BWU1 502 aa35.79■■■■□ 3.32
PDF-201ENST00000288022 CARD11Q9BXL7 1154 aa35.79■■■■□ 3.32
PDF-201ENST00000288022 MEX3CQ5U5Q3 659 aaKnown RBP35.76■■■■□ 3.32
PDF-201ENST00000288022 LRP6O75581 1613 aa35.75■■■■□ 3.31
PDF-201ENST00000288022 KRT28Q7Z3Y7 464 aa35.74■■■■□ 3.31
PDF-201ENST00000288022 NUDT16Q96DE0 195 aaKnown RBP35.74■■■■□ 3.31
PDF-201ENST00000288022 ITSN1Q15811 1721 aa35.73■■■■□ 3.31
PDF-201ENST00000288022 ATP7BP35670 1465 aa35.73■■■■□ 3.31
PDF-201ENST00000288022 PSME1Q06323 249 aa35.72■■■■□ 3.31
PDF-201ENST00000288022 SRPK2P78362 688 aaKnown RBP35.71■■■■□ 3.31
PDF-201ENST00000288022 TIMELESSQ9UNS1 1208 aa35.7■■■■□ 3.31
PDF-201ENST00000288022 NGDNQ8NEJ9 315 aaKnown RBP35.67■■■■□ 3.3
PDF-201ENST00000288022 ILDR2Q71H61 639 aa35.65■■■■□ 3.3
PDF-201ENST00000288022 CABP2Q9NPB3 220 aa35.65■■■■□ 3.3
PDF-201ENST00000288022 COL22A1Q8NFW1 1626 aaPredicted RBP35.65■■■■□ 3.3
PDF-201ENST00000288022 SPATA31A3Q5VYP0 1347 aa35.64■■■■□ 3.3
PDF-201ENST00000288022 EVC2Q86UK5 1308 aa35.63■■■■□ 3.29
PDF-201ENST00000288022 TOPAZ1Q8N9V7 1692 aa35.63■■■■□ 3.29
PDF-201ENST00000288022 CCDC61Q9Y6R9 512 aa35.63■■■■□ 3.29
PDF-201ENST00000288022 TNS3Q68CZ2 1445 aa35.61■■■■□ 3.29
PDF-201ENST00000288022 RGS17Q9UGC6 210 aaPredicted RBP35.61■■■■□ 3.29
PDF-201ENST00000288022 LMOD2Q6P5Q4 547 aa35.6■■■■□ 3.29
PDF-201ENST00000288022 SBNO1A3KN83 1393 aa35.6■■■■□ 3.29
PDF-201ENST00000288022 ADAMTS2O95450 1211 aa35.58■■■■□ 3.29
PDF-201ENST00000288022 PPIP5K1Q6PFW1 1433 aa35.56■■■■□ 3.28
PDF-201ENST00000288022 TRPM3Q9HCF6 1732 aaPredicted RBP35.54■■■■□ 3.28
PDF-201ENST00000288022 C8orf37Q96NL8 207 aa35.54■■■■□ 3.28
PDF-201ENST00000288022 ACEP12821 1306 aa35.54■■■■□ 3.28
PDF-201ENST00000288022 PLEKHG3A1L390 1219 aa35.53■■■■□ 3.28
PDF-201ENST00000288022 PLEKHG5O94827 1062 aa35.53■■■■□ 3.28
PDF-201ENST00000288022 ARHGEF10O15013 1369 aa35.52■■■■□ 3.28
PDF-201ENST00000288022 SBNO2Q9Y2G9 1366 aa35.52■■■■□ 3.28
PDF-201ENST00000288022 PAK3O75914 559 aaPredicted RBP35.52■■■■□ 3.28
PDF-201ENST00000288022 POLR3AO14802 1390 aaPredicted RBP35.51■■■■□ 3.27
PDF-201ENST00000288022 HAP1P54257 671 aaPredicted RBP35.48■■■■□ 3.27
PDF-201ENST00000288022 ZNF772Q68DY9 489 aaPredicted RBP35.48■■■■□ 3.27
PDF-201ENST00000288022 POTEAQ6S8J7 498 aa35.48■■■■□ 3.27
PDF-201ENST00000288022 NGLY1Q96IV0 654 aa35.48■■■■□ 3.27
PDF-201ENST00000288022 AFF2P51816 1311 aa35.48■■■■□ 3.27
PDF-201ENST00000288022 CABP1Q9NZU7 370 aa35.47■■■■□ 3.27
PDF-201ENST00000288022 ST20-MTHFSA0A0A6YYL1 179 aa35.46■■■■□ 3.27
PDF-201ENST00000288022 ALS2Q96Q42 1657 aa35.46■■■■□ 3.27
PDF-201ENST00000288022 CABLES1Q8TDN4 633 aa35.45■■■■□ 3.27
PDF-201ENST00000288022 USP47Q96K76 1375 aa35.44■■■■□ 3.26
PDF-201ENST00000288022 ATAD2Q6PL18 1390 aa35.43■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms