RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 COL16A1Q07092 1604 aaPredicted RBP27.44■■□□□ 1.98
MALSU1-201ENST00000287543 POGKQ9P215 609 aa27.43■■□□□ 1.98
MALSU1-201ENST00000287543 PLEKHH1Q9ULM0 1364 aa27.43■■□□□ 1.98
MALSU1-201ENST00000287543 SOCS7O14512 581 aa27.42■■□□□ 1.98
MALSU1-201ENST00000287543 ESCO1Q5FWF5 840 aa27.42■■□□□ 1.98
MALSU1-201ENST00000287543 PRAM1Q96QH2 718 aa27.42■■□□□ 1.98
MALSU1-201ENST00000287543 CDC42BPGQ6DT37 1551 aa27.41■■□□□ 1.98
MALSU1-201ENST00000287543 TRIM26Q12899 539 aaPredicted RBP27.41■■□□□ 1.98
MALSU1-201ENST00000287543 TRAK1Q9UPV9 953 aa27.38■■□□□ 1.97
MALSU1-201ENST00000287543 KNDC1Q76NI1 1749 aa27.38■■□□□ 1.97
MALSU1-201ENST00000287543 SOS2Q07890 1332 aaPredicted RBP27.38■■□□□ 1.97
MALSU1-201ENST00000287543 NPHP3Q7Z494 1330 aa27.38■■□□□ 1.97
MALSU1-201ENST00000287543 MEX3CQ5U5Q3 659 aaKnown RBP27.37■■□□□ 1.97
MALSU1-201ENST00000287543 DDX17Q92841 729 aaKnown RBP27.37■■□□□ 1.97
MALSU1-201ENST00000287543 DLC1Q96QB1 1528 aa27.36■■□□□ 1.97
MALSU1-201ENST00000287543 RGS17Q9UGC6 210 aaPredicted RBP27.36■■□□□ 1.97
MALSU1-201ENST00000287543 ADGRB1O14514 1584 aa27.35■■□□□ 1.97
MALSU1-201ENST00000287543 NUTM2FA1L443 756 aa27.33■■□□□ 1.97
MALSU1-201ENST00000287543 SAFB2Q14151 953 aaKnown RBP eCLIP27.33■■□□□ 1.97
MALSU1-201ENST00000287543 NHSL1Q5SYE7 1610 aa27.3■■□□□ 1.96
MALSU1-201ENST00000287543 NUTM2BA6NNL0 878 aaPredicted RBP27.3■■□□□ 1.96
MALSU1-201ENST00000287543 NUTM2EB1AL46 878 aaPredicted RBP27.3■■□□□ 1.96
MALSU1-201ENST00000287543 FOXO3O43524 673 aa27.3■■□□□ 1.96
MALSU1-201ENST00000287543 NUTM2AQ8IVF1 878 aaPredicted RBP27.3■■□□□ 1.96
MALSU1-201ENST00000287543 PNPLA6Q8IY17 1366 aa27.29■■□□□ 1.96
MALSU1-201ENST00000287543 ZNF772Q68DY9 489 aaPredicted RBP27.28■■□□□ 1.96
MALSU1-201ENST00000287543 SHPRHQ149N8 1683 aa27.27■■□□□ 1.96
MALSU1-201ENST00000287543 EIF3AQ14152 1382 aaKnown RBP27.27■■□□□ 1.96
MALSU1-201ENST00000287543 L3MBTL2Q969R5 705 aa27.27■■□□□ 1.96
MALSU1-201ENST00000287543 SIN3AQ96ST3 1273 aa27.26■■□□□ 1.95
MALSU1-201ENST00000287543 NEUROD1Q13562 356 aa27.25■■□□□ 1.95
MALSU1-201ENST00000287543 PHF8Q9UPP1 1060 aa27.25■■□□□ 1.95
MALSU1-201ENST00000287543 LRP6O75581 1613 aa27.24■■□□□ 1.95
MALSU1-201ENST00000287543 POTEAQ6S8J7 498 aa27.24■■□□□ 1.95
MALSU1-201ENST00000287543 ANKARQ7Z5J8 1434 aa27.23■■□□□ 1.95
MALSU1-201ENST00000287543 MINK1Q8N4C8 1332 aaPredicted RBP27.22■■□□□ 1.95
MALSU1-201ENST00000287543 WASLO00401 505 aaPredicted RBP27.22■■□□□ 1.95
MALSU1-201ENST00000287543 PSME1Q06323 249 aa27.22■■□□□ 1.95
MALSU1-201ENST00000287543 HIRIP3Q9BW71 556 aaPredicted RBP27.21■■□□□ 1.95
MALSU1-201ENST00000287543 NBPF1Q3BBV0 1214 aa27.19■■□□□ 1.94
MALSU1-201ENST00000287543 KRT28Q7Z3Y7 464 aa27.19■■□□□ 1.94
MALSU1-201ENST00000287543 PXDNQ92626 1479 aa27.18■■□□□ 1.94
MALSU1-201ENST00000287543 FMN2Q9NZ56 1722 aa27.17■■□□□ 1.94
MALSU1-201ENST00000287543 XPCQ01831 940 aaPredicted RBP27.17■■□□□ 1.94
MALSU1-201ENST00000287543 ADGRB2O60241 1585 aa27.16■■□□□ 1.94
MALSU1-201ENST00000287543 C8orf37Q96NL8 207 aa27.15■■□□□ 1.94
MALSU1-201ENST00000287543 SPATA31A3Q5VYP0 1347 aa27.15■■□□□ 1.94
MALSU1-201ENST00000287543 KIAA1210Q9ULL0 1709 aa27.13■■□□□ 1.93
MALSU1-201ENST00000287543 ADAMTS2O95450 1211 aa27.13■■□□□ 1.93
MALSU1-201ENST00000287543 NGLY1Q96IV0 654 aa27.13■■□□□ 1.93
MALSU1-201ENST00000287543 AFF2P51816 1311 aa27.13■■□□□ 1.93
MALSU1-201ENST00000287543 KIF1AQ12756 1690 aa27.12■■□□□ 1.93
MALSU1-201ENST00000287543 PMFBP1Q8TBY8 1022 aa27.11■■□□□ 1.93
MALSU1-201ENST00000287543 SBNO1A3KN83 1393 aa27.1■■□□□ 1.93
MALSU1-201ENST00000287543 RXRBP28702 533 aa27.09■■□□□ 1.93
MALSU1-201ENST00000287543 CDK19Q9BWU1 502 aa27.09■■□□□ 1.93
MALSU1-201ENST00000287543 TULP4Q9NRJ4 1543 aa27.09■■□□□ 1.93
MALSU1-201ENST00000287543 CENPJQ9HC77 1338 aaPredicted RBP27.09■■□□□ 1.93
MALSU1-201ENST00000287543 GPRASP1Q5JY77 1395 aa27.09■■□□□ 1.93
MALSU1-201ENST00000287543 NUDT16Q96DE0 195 aaKnown RBP27.08■■□□□ 1.93
MALSU1-201ENST00000287543 PRR36Q9H6K5 1346 aa27.08■■□□□ 1.93
MALSU1-201ENST00000287543 NGDNQ8NEJ9 315 aaKnown RBP27.07■■□□□ 1.92
MALSU1-201ENST00000287543 FNBP4Q8N3X1 1017 aaPredicted RBP27.05■■□□□ 1.92
MALSU1-201ENST00000287543 ARHGEF10O15013 1369 aa27.05■■□□□ 1.92
MALSU1-201ENST00000287543 TONSLQ96HA7 1378 aa27.05■■□□□ 1.92
MALSU1-201ENST00000287543 TNS3Q68CZ2 1445 aa27.05■■□□□ 1.92
MALSU1-201ENST00000287543 QTRT2Q9H974 415 aaKnown RBP27.04■■□□□ 1.92
MALSU1-201ENST00000287543 CCDC61Q9Y6R9 512 aa27.04■■□□□ 1.92
MALSU1-201ENST00000287543 ROCK2O75116 1388 aaKnown RBP27.04■■□□□ 1.92
MALSU1-201ENST00000287543 COL22A1Q8NFW1 1626 aaPredicted RBP27.03■■□□□ 1.92
MALSU1-201ENST00000287543 HAP1P54257 671 aaPredicted RBP27.02■■□□□ 1.92
MALSU1-201ENST00000287543 LMOD2Q6P5Q4 547 aa27.02■■□□□ 1.92
MALSU1-201ENST00000287543 USP21Q9UK80 565 aa27.02■■□□□ 1.92
MALSU1-201ENST00000287543 ARHGEF28Q8N1W1 1705 aaKnown RBP27.01■■□□□ 1.91
MALSU1-201ENST00000287543 RBM6P78332 1123 aaKnown RBP27■■□□□ 1.91
MALSU1-201ENST00000287543 SRPK2P78362 688 aaKnown RBP26.99■■□□□ 1.91
MALSU1-201ENST00000287543 TRPC5Q9UL62 973 aaPredicted RBP26.99■■□□□ 1.91
MALSU1-201ENST00000287543 USP32Q8NFA0 1604 aa26.98■■□□□ 1.91
MALSU1-201ENST00000287543 PLEKHG3A1L390 1219 aa26.97■■□□□ 1.91
MALSU1-201ENST00000287543 NBPF8Q3BBV2 869 aa26.97■■□□□ 1.91
MALSU1-201ENST00000287543 ATP7BP35670 1465 aa26.96■■□□□ 1.91
MALSU1-201ENST00000287543 CDK12Q9NYV4 1490 aaPredicted RBP26.94■■□□□ 1.9
MALSU1-201ENST00000287543 EVC2Q86UK5 1308 aa26.94■■□□□ 1.9
MALSU1-201ENST00000287543 PAK3O75914 559 aaPredicted RBP26.93■■□□□ 1.9
MALSU1-201ENST00000287543 CARD11Q9BXL7 1154 aa26.92■■□□□ 1.9
MALSU1-201ENST00000287543 POLR3AO14802 1390 aaPredicted RBP26.92■■□□□ 1.9
MALSU1-201ENST00000287543 ACEP12821 1306 aa26.91■■□□□ 1.9
MALSU1-201ENST00000287543 CABLES1Q8TDN4 633 aa26.91■■□□□ 1.9
MALSU1-201ENST00000287543 CABP2Q9NPB3 220 aa26.9■■□□□ 1.9
MALSU1-201ENST00000287543 TRPM1Q7Z4N2 1603 aa26.9■■□□□ 1.9
MALSU1-201ENST00000287543 UNC5CLQ8IV45 518 aa26.89■■□□□ 1.9
MALSU1-201ENST00000287543 RGPD8O14715 1765 aaPredicted RBP26.89■■□□□ 1.89
MALSU1-201ENST00000287543 CLSPNQ9HAW4 1339 aa26.87■■□□□ 1.89
MALSU1-201ENST00000287543 ATRNO75882 1429 aa26.86■■□□□ 1.89
MALSU1-201ENST00000287543 PLEKHG5O94827 1062 aa26.86■■□□□ 1.89
MALSU1-201ENST00000287543 BCL9LQ86UU0 1499 aa26.86■■□□□ 1.89
MALSU1-201ENST00000287543 BRD4O60885 1362 aaPredicted RBP26.85■■□□□ 1.89
MALSU1-201ENST00000287543 PPIP5K1Q6PFW1 1433 aa26.85■■□□□ 1.89
MALSU1-201ENST00000287543 TIMELESSQ9UNS1 1208 aa26.84■■□□□ 1.89
MALSU1-201ENST00000287543 RALGAPBQ86X10 1494 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms