RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 COL22A1Q8NFW1 1626 aaPredicted RBP18.82■□□□□ 0.6
MRPS28-201ENST00000276585 NALCNQ8IZF0 1738 aa18.82■□□□□ 0.6
MRPS28-201ENST00000276585 UNC5CLQ8IV45 518 aa18.81■□□□□ 0.6
MRPS28-201ENST00000276585 SEPT12Q8IYM1 358 aa18.81■□□□□ 0.6
MRPS28-201ENST00000276585 E9PCH4 1651 aa18.81■□□□□ 0.6
MRPS28-201ENST00000276585 GLI3P10071 1580 aa18.81■□□□□ 0.6
MRPS28-201ENST00000276585 R3HDM1Q15032 1099 aaKnown RBP18.8■□□□□ 0.6
MRPS28-201ENST00000276585 BRWD3Q6RI45 1802 aa18.79■□□□□ 0.6
MRPS28-201ENST00000276585 SPHKAPQ2M3C7 1700 aa18.79■□□□□ 0.6
MRPS28-201ENST00000276585 METP08581 1390 aa18.79■□□□□ 0.6
MRPS28-201ENST00000276585 IFFO2Q5TF58 517 aa18.78■□□□□ 0.6
MRPS28-201ENST00000276585 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.77■□□□□ 0.59
MRPS28-201ENST00000276585 MARF1Q9Y4F3 1742 aaKnown RBP18.77■□□□□ 0.59
MRPS28-201ENST00000276585 NRXN3Q9Y4C0 1643 aa18.76■□□□□ 0.59
MRPS28-201ENST00000276585 KRT27Q7Z3Y8 459 aa18.76■□□□□ 0.59
MRPS28-201ENST00000276585 ITGAEP38570 1179 aa18.75■□□□□ 0.59
MRPS28-201ENST00000276585 CCDC9Q9Y3X0 531 aaKnown RBP18.74■□□□□ 0.59
MRPS28-201ENST00000276585 NPHP3Q7Z494 1330 aa18.74■□□□□ 0.59
MRPS28-201ENST00000276585 A0A0G2JS52 829 aa18.73■□□□□ 0.59
MRPS28-201ENST00000276585 MYT1Q01538 1121 aa18.73■□□□□ 0.59
MRPS28-201ENST00000276585 EN1Q05925 392 aaPredicted RBP18.73■□□□□ 0.59
MRPS28-201ENST00000276585 DCAF8L1A6NGE4 600 aa18.72■□□□□ 0.59
MRPS28-201ENST00000276585 XPCQ01831 940 aaPredicted RBP18.72■□□□□ 0.59
MRPS28-201ENST00000276585 SLIT2O94813 1529 aa18.72■□□□□ 0.59
MRPS28-201ENST00000276585 ZNF326Q5BKZ1 582 aaKnown RBP18.71■□□□□ 0.59
MRPS28-201ENST00000276585 NAIPQ13075 1403 aa18.71■□□□□ 0.59
MRPS28-201ENST00000276585 ESCO1Q5FWF5 840 aa18.7■□□□□ 0.58
MRPS28-201ENST00000276585 SENP3-EIF4A1A0A087X0R7 540 aa18.68■□□□□ 0.58
MRPS28-201ENST00000276585 VPS72Q15906 364 aa18.68■□□□□ 0.58
MRPS28-201ENST00000276585 PXDNQ92626 1479 aa18.67■□□□□ 0.58
MRPS28-201ENST00000276585 FOXO3O43524 673 aa18.66■□□□□ 0.58
MRPS28-201ENST00000276585 HAP1P54257 671 aaPredicted RBP18.65■□□□□ 0.58
MRPS28-201ENST00000276585 NUP155O75694 1391 aa18.65■□□□□ 0.58
MRPS28-201ENST00000276585 HFM1A2PYH4 1435 aa18.65■□□□□ 0.58
MRPS28-201ENST00000276585 ONECUT3O60422 494 aaPredicted RBP18.64■□□□□ 0.57
MRPS28-201ENST00000276585 ROBO2Q9HCK4 1378 aa18.64■□□□□ 0.57
MRPS28-201ENST00000276585 PPP1R1BQ9UD71 204 aaPredicted RBP18.63■□□□□ 0.57
MRPS28-201ENST00000276585 LRPPRCP42704 1394 aaKnown RBP18.63■□□□□ 0.57
MRPS28-201ENST00000276585 EZH2Q15910 746 aaKnown RBP18.61■□□□□ 0.57
MRPS28-201ENST00000276585 RGPD1P0DJD0 1748 aa18.6■□□□□ 0.57
MRPS28-201ENST00000276585 USP32Q8NFA0 1604 aa18.6■□□□□ 0.57
MRPS28-201ENST00000276585 PLEKHG5O94827 1062 aa18.6■□□□□ 0.57
MRPS28-201ENST00000276585 FAM98CQ17RN3 349 aaKnown RBP18.59■□□□□ 0.57
MRPS28-201ENST00000276585 FAM182BQ5T319 152 aa18.58■□□□□ 0.56
MRPS28-201ENST00000276585 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
MRPS28-201ENST00000276585 SPATA31A3Q5VYP0 1347 aa18.57■□□□□ 0.56
MRPS28-201ENST00000276585 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
MRPS28-201ENST00000276585 NUTM2FA1L443 756 aa18.56■□□□□ 0.56
MRPS28-201ENST00000276585 ZNF784Q8NCA9 323 aaPredicted RBP18.56■□□□□ 0.56
MRPS28-201ENST00000276585 PLCH1Q4KWH8 1693 aa18.54■□□□□ 0.56
MRPS28-201ENST00000276585 CABLES1Q8TDN4 633 aa18.53■□□□□ 0.56
MRPS28-201ENST00000276585 NWD2Q9ULI1 1742 aa18.53■□□□□ 0.56
MRPS28-201ENST00000276585 NINLQ9Y2I6 1382 aa18.53■□□□□ 0.56
MRPS28-201ENST00000276585 CDC42BPGQ6DT37 1551 aa18.52■□□□□ 0.56
MRPS28-201ENST00000276585 CAMKK2Q96RR4 588 aa18.52■□□□□ 0.56
MRPS28-201ENST00000276585 SPON1Q9HCB6 807 aa18.52■□□□□ 0.56
MRPS28-201ENST00000276585 NEXMIFQ5QGS0 1516 aa18.52■□□□□ 0.56
MRPS28-201ENST00000276585 KIF1BO60333 1816 aa18.51■□□□□ 0.55
MRPS28-201ENST00000276585 C1QTNF8P60827 252 aa18.51■□□□□ 0.55
MRPS28-201ENST00000276585 ADGRB2O60241 1585 aa18.51■□□□□ 0.55
MRPS28-201ENST00000276585 TNS1Q9HBL0 1735 aaKnown RBP18.5■□□□□ 0.55
MRPS28-201ENST00000276585 KRT28Q7Z3Y7 464 aa18.5■□□□□ 0.55
MRPS28-201ENST00000276585 CCDC144AA2RUR9 1427 aa18.49■□□□□ 0.55
MRPS28-201ENST00000276585 NBPF8Q3BBV2 869 aa18.49■□□□□ 0.55
MRPS28-201ENST00000276585 NBPF14Q5TI25 921 aa18.49■□□□□ 0.55
MRPS28-201ENST00000276585 TRIM37O94972 964 aa18.48■□□□□ 0.55
MRPS28-201ENST00000276585 APBA3O96018 575 aa18.48■□□□□ 0.55
MRPS28-201ENST00000276585 LMOD2Q6P5Q4 547 aa18.48■□□□□ 0.55
MRPS28-201ENST00000276585 PRAG1Q86YV5 1406 aa18.48■□□□□ 0.55
MRPS28-201ENST00000276585 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
MRPS28-201ENST00000276585 KCNQ2O43526 872 aa18.47■□□□□ 0.55
MRPS28-201ENST00000276585 TNS3Q68CZ2 1445 aa18.47■□□□□ 0.55
MRPS28-201ENST00000276585 FAM83GA6ND36 823 aa18.46■□□□□ 0.55
MRPS28-201ENST00000276585 CAMTA1Q9Y6Y1 1673 aa18.46■□□□□ 0.55
MRPS28-201ENST00000276585 BTG4Q9NY30 223 aa18.45■□□□□ 0.54
MRPS28-201ENST00000276585 VGFO15240 615 aaPredicted RBP18.44■□□□□ 0.54
MRPS28-201ENST00000276585 PSME1Q06323 249 aa18.44■□□□□ 0.54
MRPS28-201ENST00000276585 FAM196AQ6ZSG2 479 aa18.42■□□□□ 0.54
MRPS28-201ENST00000276585 KIF1AQ12756 1690 aa18.41■□□□□ 0.54
MRPS28-201ENST00000276585 PPLO60437 1756 aa18.41■□□□□ 0.54
MRPS28-201ENST00000276585 MSH5O43196 834 aa18.41■□□□□ 0.54
MRPS28-201ENST00000276585 NRAPQ86VF7 1730 aa18.4■□□□□ 0.54
MRPS28-201ENST00000276585 WAPLQ7Z5K2 1190 aa18.39■□□□□ 0.53
MRPS28-201ENST00000276585 SPATA31A5Q5VU36 1347 aa18.39■□□□□ 0.53
MRPS28-201ENST00000276585 SPATA31A7Q8IWB4 1347 aa18.39■□□□□ 0.53
MRPS28-201ENST00000276585 ARHGEF10O15013 1369 aa18.39■□□□□ 0.53
MRPS28-201ENST00000276585 UTRNP46939 3433 aa18.39■□□□□ 0.53
MRPS28-201ENST00000276585 ABCA3Q99758 1704 aa18.38■□□□□ 0.53
MRPS28-201ENST00000276585 IFT172Q9UG01 1749 aa18.38■□□□□ 0.53
MRPS28-201ENST00000276585 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
MRPS28-201ENST00000276585 RREB1Q92766 1687 aa18.38■□□□□ 0.53
MRPS28-201ENST00000276585 NUP188Q5SRE5 1749 aa18.37■□□□□ 0.53
MRPS28-201ENST00000276585 STK26Q9P289 416 aa18.37■□□□□ 0.53
MRPS28-201ENST00000276585 THSD7AQ9UPZ6 1657 aa18.37■□□□□ 0.53
MRPS28-201ENST00000276585 PHF8Q9UPP1 1060 aa18.36■□□□□ 0.53
MRPS28-201ENST00000276585 SBNO1A3KN83 1393 aa18.35■□□□□ 0.53
MRPS28-201ENST00000276585 POTEDQ86YR6 584 aa18.34■□□□□ 0.53
MRPS28-201ENST00000276585 PIAS4Q8N2W9 510 aaPredicted RBP18.34■□□□□ 0.53
MRPS28-201ENST00000276585 FMN2Q9NZ56 1722 aa18.33■□□□□ 0.52
MRPS28-201ENST00000276585 COL14A1Q05707 1796 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms