RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 STRN4Q9NRL3 753 aa18.03■□□□□ 0.48
TMEM47-201ENST00000275954 TSPOAP1O95153 1857 aa18.03■□□□□ 0.48
TMEM47-201ENST00000275954 MSH5O43196 834 aa18.03■□□□□ 0.48
TMEM47-201ENST00000275954 POGZQ7Z3K3 1410 aa18.02■□□□□ 0.48
TMEM47-201ENST00000275954 NCKAP5LQ9HCH0 1330 aa18.02■□□□□ 0.48
TMEM47-201ENST00000275954 NPHP1O15259 732 aa18.01■□□□□ 0.47
TMEM47-201ENST00000275954 EXOSC9Q06265 439 aaKnown RBP18.01■□□□□ 0.47
TMEM47-201ENST00000275954 RRS1Q15050 365 aaKnown RBP18■□□□□ 0.47
TMEM47-201ENST00000275954 YEATS2Q9ULM3 1422 aa18■□□□□ 0.47
TMEM47-201ENST00000275954 CFAP43Q8NDM7 1665 aa18■□□□□ 0.47
TMEM47-201ENST00000275954 TRIM44Q96DX7 344 aaPredicted RBP18■□□□□ 0.47
TMEM47-201ENST00000275954 NGEFQ8N5V2 710 aa17.99■□□□□ 0.47
TMEM47-201ENST00000275954 LNPKQ9C0E8 428 aa17.99■□□□□ 0.47
TMEM47-201ENST00000275954 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
TMEM47-201ENST00000275954 TAOK2Q9UL54 1235 aa17.99■□□□□ 0.47
TMEM47-201ENST00000275954 NLRP2Q9NX02 1062 aa17.98■□□□□ 0.47
TMEM47-201ENST00000275954 PRKAR2BP31323 418 aa17.98■□□□□ 0.47
TMEM47-201ENST00000275954 TCOF1Q13428 1488 aaKnown RBP17.97■□□□□ 0.47
TMEM47-201ENST00000275954 NOS1P29475 1434 aa17.96■□□□□ 0.47
TMEM47-201ENST00000275954 A2MP01023 1474 aa17.96■□□□□ 0.47
TMEM47-201ENST00000275954 LMOD3Q0VAK6 560 aa17.96■□□□□ 0.47
TMEM47-201ENST00000275954 KDM5BQ9UGL1 1544 aa17.95■□□□□ 0.46
TMEM47-201ENST00000275954 KCNJ4P48050 445 aa17.95■□□□□ 0.46
TMEM47-201ENST00000275954 BACH2Q9BYV9 841 aa17.95■□□□□ 0.46
TMEM47-201ENST00000275954 DDX19BQ9UMR2 479 aa17.95■□□□□ 0.46
TMEM47-201ENST00000275954 ADAMTS2O95450 1211 aa17.94■□□□□ 0.46
TMEM47-201ENST00000275954 SLFN5Q08AF3 891 aa17.94■□□□□ 0.46
TMEM47-201ENST00000275954 WWC1Q8IX03 1113 aa17.94■□□□□ 0.46
TMEM47-201ENST00000275954 MEX3CQ5U5Q3 659 aaKnown RBP17.94■□□□□ 0.46
TMEM47-201ENST00000275954 NOL8Q76FK4 1167 aaKnown RBP17.94■□□□□ 0.46
TMEM47-201ENST00000275954 TESK2Q96S53 571 aa17.93■□□□□ 0.46
TMEM47-201ENST00000275954 KAT6BQ8WYB5 2073 aa17.92■□□□□ 0.46
TMEM47-201ENST00000275954 NSD3Q9BZ95 1437 aa17.92■□□□□ 0.46
TMEM47-201ENST00000275954 TRIM6-TRIM34B2RNG4 842 aa17.92■□□□□ 0.46
TMEM47-201ENST00000275954 NUDT16Q96DE0 195 aaKnown RBP17.91■□□□□ 0.46
TMEM47-201ENST00000275954 ZMYM3Q14202 1370 aa17.91■□□□□ 0.46
TMEM47-201ENST00000275954 PZPP20742 1482 aa17.91■□□□□ 0.46
TMEM47-201ENST00000275954 ZNF518AQ6AHZ1 1483 aa17.91■□□□□ 0.46
TMEM47-201ENST00000275954 THUMPD2Q9BTF0 503 aaKnown RBP17.91■□□□□ 0.46
TMEM47-201ENST00000275954 C1orf115Q9H7X2 142 aa17.91■□□□□ 0.46
TMEM47-201ENST00000275954 PLCB2Q00722 1185 aa17.89■□□□□ 0.45
TMEM47-201ENST00000275954 PDZRN3Q9UPQ7 1066 aa17.89■□□□□ 0.45
TMEM47-201ENST00000275954 DUSP27Q5VZP5 1158 aa17.89■□□□□ 0.45
TMEM47-201ENST00000275954 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
TMEM47-201ENST00000275954 EIF2S2P20042 333 aaKnown RBP17.88■□□□□ 0.45
TMEM47-201ENST00000275954 DDX17Q92841 729 aaKnown RBP17.88■□□□□ 0.45
TMEM47-201ENST00000275954 TNRQ92752 1358 aa17.88■□□□□ 0.45
TMEM47-201ENST00000275954 NME9Q86XW9 330 aa17.88■□□□□ 0.45
TMEM47-201ENST00000275954 PDE3AQ14432 1141 aa17.87■□□□□ 0.45
TMEM47-201ENST00000275954 AMER1Q5JTC6 1135 aaPredicted RBP17.87■□□□□ 0.45
TMEM47-201ENST00000275954 FOXD4L5Q5VV16 416 aaPredicted RBP17.87■□□□□ 0.45
TMEM47-201ENST00000275954 FOXD4L4Q8WXT5 416 aaPredicted RBP17.87■□□□□ 0.45
TMEM47-201ENST00000275954 CABLES1Q8TDN4 633 aa17.87■□□□□ 0.45
TMEM47-201ENST00000275954 NOB1Q9ULX3 412 aaKnown RBP17.86■□□□□ 0.45
TMEM47-201ENST00000275954 PER1O15534 1290 aaPredicted RBP17.86■□□□□ 0.45
TMEM47-201ENST00000275954 KCNA6P17658 529 aa17.86■□□□□ 0.45
TMEM47-201ENST00000275954 PHF23Q9BUL5 403 aaPredicted RBP17.86■□□□□ 0.45
TMEM47-201ENST00000275954 HMMRO75330 724 aa17.86■□□□□ 0.45
TMEM47-201ENST00000275954 USHBP1Q8N6Y0 703 aa17.86■□□□□ 0.45
TMEM47-201ENST00000275954 GNAI1P63096 354 aa17.85■□□□□ 0.45
TMEM47-201ENST00000275954 ZRANB1Q9UGI0 708 aa17.85■□□□□ 0.45
TMEM47-201ENST00000275954 NAP1L2Q9ULW6 460 aaPredicted RBP17.85■□□□□ 0.45
TMEM47-201ENST00000275954 RTEL1-TNFRSF6BF6WH68 1400 aa17.85■□□□□ 0.45
TMEM47-201ENST00000275954 PRAG1Q86YV5 1406 aa17.85■□□□□ 0.45
TMEM47-201ENST00000275954 TEX14Q8IWB6 1497 aa17.85■□□□□ 0.45
TMEM47-201ENST00000275954 FGD1P98174 961 aa17.84■□□□□ 0.45
TMEM47-201ENST00000275954 NFKBIBQ15653 356 aa17.84■□□□□ 0.45
TMEM47-201ENST00000275954 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
TMEM47-201ENST00000275954 KIF16BQ96L93 1317 aa17.84■□□□□ 0.45
TMEM47-201ENST00000275954 PTMAP06454 111 aaKnown RBP17.83■□□□□ 0.45
TMEM47-201ENST00000275954 CHRNA2Q15822 529 aa17.83■□□□□ 0.45
TMEM47-201ENST00000275954 SULT6B1Q6IMI4 303 aa17.83■□□□□ 0.45
TMEM47-201ENST00000275954 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.45
TMEM47-201ENST00000275954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.83■□□□□ 0.45
TMEM47-201ENST00000275954 SAMD9Q5K651 1589 aa17.83■□□□□ 0.45
TMEM47-201ENST00000275954 DDX54Q8TDD1 881 aaKnown RBP17.83■□□□□ 0.44
TMEM47-201ENST00000275954 RILPL2Q969X0 211 aa17.83■□□□□ 0.44
TMEM47-201ENST00000275954 TMPOP42166 694 aaKnown RBP17.82■□□□□ 0.44
TMEM47-201ENST00000275954 PRDM11Q9NQV5 511 aa17.82■□□□□ 0.44
TMEM47-201ENST00000275954 FKBP5Q13451 457 aaPredicted RBP17.82■□□□□ 0.44
TMEM47-201ENST00000275954 LTKP29376 864 aa17.81■□□□□ 0.44
TMEM47-201ENST00000275954 GSE1Q14687 1217 aa17.81■□□□□ 0.44
TMEM47-201ENST00000275954 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
TMEM47-201ENST00000275954 FAM135AQ9P2D6 1515 aa17.81■□□□□ 0.44
TMEM47-201ENST00000275954 MCCP23508 829 aa17.81■□□□□ 0.44
TMEM47-201ENST00000275954 FOXD4L6Q3SYB3 417 aaPredicted RBP17.81■□□□□ 0.44
TMEM47-201ENST00000275954 FOXD4L3Q6VB84 417 aaPredicted RBP17.81■□□□□ 0.44
TMEM47-201ENST00000275954 API5Q9BZZ5 524 aaKnown RBP17.81■□□□□ 0.44
TMEM47-201ENST00000275954 KDM6BO15054 1643 aa17.8■□□□□ 0.44
TMEM47-201ENST00000275954 ABCC10Q5T3U5 1492 aa17.8■□□□□ 0.44
TMEM47-201ENST00000275954 WDR63Q8IWG1 891 aa17.8■□□□□ 0.44
TMEM47-201ENST00000275954 GBP4Q96PP9 640 aa17.8■□□□□ 0.44
TMEM47-201ENST00000275954 RPGRIP1LQ68CZ1 1315 aa17.8■□□□□ 0.44
TMEM47-201ENST00000275954 KIAA1211Q6ZU35 1233 aa17.8■□□□□ 0.44
TMEM47-201ENST00000275954 C22orf23Q9BZE7 217 aa17.8■□□□□ 0.44
TMEM47-201ENST00000275954 DCTN1Q14203 1278 aa17.79■□□□□ 0.44
TMEM47-201ENST00000275954 NAP1L5Q96NT1 182 aaPredicted RBP17.79■□□□□ 0.44
TMEM47-201ENST00000275954 SCAF11Q99590 1463 aaKnown RBP17.79■□□□□ 0.44
TMEM47-201ENST00000275954 TWISTNBQ3B726 338 aaPredicted RBP17.79■□□□□ 0.44
TMEM47-201ENST00000275954 C14orf93Q9H972 538 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 268.6 ms