RNA–Protein interactions for RNA: ENST00000275493.6

EGFR-201, Transcript of epidermal growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGFR, Length 9,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-201ENST00000275493 CCDC70Q6NSX1 233 aa13.37□□□□□ -0.27
EGFR-201ENST00000275493 TMEM132AQ24JP5 1023 aa13.37□□□□□ -0.27
EGFR-201ENST00000275493 BRMS1Q9HCU9 246 aa13.37□□□□□ -0.27
EGFR-201ENST00000275493 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
EGFR-201ENST00000275493 RALYLQ86SE5 291 aaKnown RBP13.36□□□□□ -0.27
EGFR-201ENST00000275493 FOSBP53539 338 aa13.36□□□□□ -0.27
EGFR-201ENST00000275493 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
EGFR-201ENST00000275493 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
EGFR-201ENST00000275493 GGNBP2Q9H3C7 697 aa13.36□□□□□ -0.27
EGFR-201ENST00000275493 RBM19Q9Y4C8 960 aaKnown RBP13.36□□□□□ -0.27
EGFR-201ENST00000275493 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.35□□□□□ -0.27
EGFR-201ENST00000275493 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.35□□□□□ -0.27
EGFR-201ENST00000275493 DEKP35659 375 aaKnown RBP13.35□□□□□ -0.27
EGFR-201ENST00000275493 THEMISQ8N1K5 641 aaPredicted RBP13.35□□□□□ -0.27
EGFR-201ENST00000275493 CCAR2Q8N163 923 aaKnown RBP13.35□□□□□ -0.27
EGFR-201ENST00000275493 TATP17735 454 aaPredicted RBP13.35□□□□□ -0.27
EGFR-201ENST00000275493 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
EGFR-201ENST00000275493 RRBP1Q9P2E9 1410 aaKnown RBP13.35□□□□□ -0.27
EGFR-201ENST00000275493 TBC1D2BQ9UPU7 963 aa13.35□□□□□ -0.27
EGFR-201ENST00000275493 IPO7O95373 1038 aaKnown RBP13.35□□□□□ -0.27
EGFR-201ENST00000275493 UBTFL1P0CB47 393 aaPredicted RBP13.34□□□□□ -0.27
EGFR-201ENST00000275493 FYCO1Q9BQS8 1478 aa13.34□□□□□ -0.27
EGFR-201ENST00000275493 WWC2Q6AWC2 1192 aa13.34□□□□□ -0.27
EGFR-201ENST00000275493 TOM1L2Q6ZVM7 507 aa13.34□□□□□ -0.27
EGFR-201ENST00000275493 SLC4A3P48751 1232 aa13.34□□□□□ -0.27
EGFR-201ENST00000275493 SYNJ2O15056 1496 aa13.34□□□□□ -0.27
EGFR-201ENST00000275493 PRG4Q92954 1404 aaPredicted RBP13.33□□□□□ -0.28
EGFR-201ENST00000275493 NINLQ9Y2I6 1382 aa13.33□□□□□ -0.28
EGFR-201ENST00000275493 SLC3A2P08195 630 aaKnown RBP13.33□□□□□ -0.28
EGFR-201ENST00000275493 POGZQ7Z3K3 1410 aa13.33□□□□□ -0.28
EGFR-201ENST00000275493 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
EGFR-201ENST00000275493 GAS2L2Q8NHY3 880 aa13.32□□□□□ -0.28
EGFR-201ENST00000275493 CT47A1Q5JQC4 288 aaPredicted RBP13.32□□□□□ -0.28
EGFR-201ENST00000275493 BICD2Q8TD16 824 aa13.32□□□□□ -0.28
EGFR-201ENST00000275493 CABP4P57796 275 aa13.32□□□□□ -0.28
EGFR-201ENST00000275493 GNL3LQ9NVN8 582 aaKnown RBP13.32□□□□□ -0.28
EGFR-201ENST00000275493 RRP1P56182 461 aaKnown RBP13.31□□□□□ -0.28
EGFR-201ENST00000275493 GRIN2BQ13224 1484 aa13.31□□□□□ -0.28
EGFR-201ENST00000275493 XBP1P17861 261 aa13.31□□□□□ -0.28
EGFR-201ENST00000275493 STAC3Q96MF2 364 aa13.31□□□□□ -0.28
EGFR-201ENST00000275493 ODF2Q5BJF6 829 aa13.31□□□□□ -0.28
EGFR-201ENST00000275493 EPS15P42566 896 aa13.31□□□□□ -0.28
EGFR-201ENST00000275493 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
EGFR-201ENST00000275493 ZNF644Q9H582 1327 aaPredicted RBP13.31□□□□□ -0.28
EGFR-201ENST00000275493 DDX54Q8TDD1 881 aaKnown RBP13.31□□□□□ -0.28
EGFR-201ENST00000275493 CCDC30Q5VVM6 783 aa13.3□□□□□ -0.28
EGFR-201ENST00000275493 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
EGFR-201ENST00000275493 CNNM1Q9NRU3 951 aa13.3□□□□□ -0.28
EGFR-201ENST00000275493 INTS3Q68E01 1043 aaKnown RBP13.3□□□□□ -0.28
EGFR-201ENST00000275493 IPO9Q96P70 1041 aaKnown RBP13.3□□□□□ -0.28
EGFR-201ENST00000275493 TTC39AQ5SRH9 613 aa13.3□□□□□ -0.28
EGFR-201ENST00000275493 ANKLE2Q86XL3 938 aa13.3□□□□□ -0.28
EGFR-201ENST00000275493 DNAJC2Q99543 621 aaKnown RBP13.3□□□□□ -0.28
EGFR-201ENST00000275493 RBM5P52756 815 aaKnown RBP eCLIP13.3□□□□□ -0.28
EGFR-201ENST00000275493 VPS37CA5D8V6 355 aaPredicted RBP13.29□□□□□ -0.28
EGFR-201ENST00000275493 DDX49Q9Y6V7 483 aaKnown RBP13.29□□□□□ -0.28
EGFR-201ENST00000275493 FSD1Q9BTV5 496 aa13.29□□□□□ -0.28
EGFR-201ENST00000275493 KDM4AO75164 1064 aa13.29□□□□□ -0.28
EGFR-201ENST00000275493 ANKRD50Q9ULJ7 1429 aa13.29□□□□□ -0.28
EGFR-201ENST00000275493 SPG7Q9UQ90 795 aa13.29□□□□□ -0.28
EGFR-201ENST00000275493 SMC3Q9UQE7 1217 aa13.28□□□□□ -0.28
EGFR-201ENST00000275493 PRAM1Q96QH2 718 aa13.28□□□□□ -0.28
EGFR-201ENST00000275493 MRC2Q9UBG0 1479 aa13.28□□□□□ -0.28
EGFR-201ENST00000275493 NAP1L1P55209 391 aaKnown RBP13.28□□□□□ -0.28
EGFR-201ENST00000275493 AFAP1Q8N556 730 aa13.28□□□□□ -0.28
EGFR-201ENST00000275493 FGD6Q6ZV73 1430 aa13.27□□□□□ -0.28
EGFR-201ENST00000275493 ATP2B2Q01814 1243 aa13.27□□□□□ -0.28
EGFR-201ENST00000275493 EXOC6Q8TAG9 804 aa13.27□□□□□ -0.28
EGFR-201ENST00000275493 CNTROBQ8N137 903 aa13.27□□□□□ -0.29
EGFR-201ENST00000275493 SKOR2Q2VWA4 1001 aaPredicted RBP13.27□□□□□ -0.29
EGFR-201ENST00000275493 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.29
EGFR-201ENST00000275493 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
EGFR-201ENST00000275493 CDK5RAP3Q96JB5 506 aa13.25□□□□□ -0.29
EGFR-201ENST00000275493 IGF1RP08069 1367 aa13.25□□□□□ -0.29
EGFR-201ENST00000275493 RRP12Q5JTH9 1297 aaKnown RBP13.25□□□□□ -0.29
EGFR-201ENST00000275493 CCDC158Q5M9N0 1113 aa13.25□□□□□ -0.29
EGFR-201ENST00000275493 ZFYVE27Q5T4F4 411 aa13.25□□□□□ -0.29
EGFR-201ENST00000275493 PSMA5P28066 241 aa13.24□□□□□ -0.29
EGFR-201ENST00000275493 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
EGFR-201ENST00000275493 TNNT3P45378 269 aaPredicted RBP13.24□□□□□ -0.29
EGFR-201ENST00000275493 CCDC73Q6ZRK6 1079 aa13.24□□□□□ -0.29
EGFR-201ENST00000275493 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
EGFR-201ENST00000275493 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.23□□□□□ -0.29
EGFR-201ENST00000275493 ZNF592Q92610 1267 aa13.23□□□□□ -0.29
EGFR-201ENST00000275493 ZBED9Q6R2W3 1325 aa13.23□□□□□ -0.29
EGFR-201ENST00000275493 CNTLNQ9NXG0 1405 aa13.23□□□□□ -0.29
EGFR-201ENST00000275493 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
EGFR-201ENST00000275493 GNAI3P08754 354 aa13.22□□□□□ -0.29
EGFR-201ENST00000275493 SASS6Q6UVJ0 657 aa13.22□□□□□ -0.29
EGFR-201ENST00000275493 PLEKHH2Q8IVE3 1493 aa13.22□□□□□ -0.29
EGFR-201ENST00000275493 IFT140Q96RY7 1462 aa13.22□□□□□ -0.29
EGFR-201ENST00000275493 NCOA2Q15596 1464 aa13.22□□□□□ -0.29
EGFR-201ENST00000275493 HMGB2P26583 209 aaKnown RBP13.22□□□□□ -0.29
EGFR-201ENST00000275493 ZNF530Q6P9A1 599 aaPredicted RBP13.22□□□□□ -0.29
EGFR-201ENST00000275493 ERC1Q8IUD2 1116 aa13.22□□□□□ -0.29
EGFR-201ENST00000275493 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
EGFR-201ENST00000275493 OLFM4Q6UX06 510 aa13.22□□□□□ -0.29
EGFR-201ENST00000275493 GPS2Q13227 327 aa13.22□□□□□ -0.29
EGFR-201ENST00000275493 CLASRPQ8N2M8 674 aaKnown RBP13.21□□□□□ -0.29
EGFR-201ENST00000275493 HSP90AB2PQ58FF8 381 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms