RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 SMC3Q9UQE7 1217 aa14.43□□□□□ -0.1
SHPRH-201ENST00000275233 NUTM2BA6NNL0 878 aaPredicted RBP14.42□□□□□ -0.1
SHPRH-201ENST00000275233 NUTM2EB1AL46 878 aaPredicted RBP14.42□□□□□ -0.1
SHPRH-201ENST00000275233 NUTM2AQ8IVF1 878 aaPredicted RBP14.42□□□□□ -0.1
SHPRH-201ENST00000275233 STK11IPQ8N1F8 1099 aa14.42□□□□□ -0.1
SHPRH-201ENST00000275233 RAD54L2Q9Y4B4 1467 aa14.42□□□□□ -0.1
SHPRH-201ENST00000275233 ZBED9Q6R2W3 1325 aa14.42□□□□□ -0.1
SHPRH-201ENST00000275233 ROCK1Q13464 1354 aa14.42□□□□□ -0.1
SHPRH-201ENST00000275233 GNAI1P63096 354 aa14.41□□□□□ -0.1
SHPRH-201ENST00000275233 UBTFL1P0CB47 393 aaPredicted RBP14.41□□□□□ -0.1
SHPRH-201ENST00000275233 NAP1L1P55209 391 aaKnown RBP14.41□□□□□ -0.1
SHPRH-201ENST00000275233 DNAJC2Q99543 621 aaKnown RBP14.41□□□□□ -0.1
SHPRH-201ENST00000275233 INTS3Q68E01 1043 aaKnown RBP14.41□□□□□ -0.1
SHPRH-201ENST00000275233 RALYLQ86SE5 291 aaKnown RBP14.41□□□□□ -0.1
SHPRH-201ENST00000275233 ATAD2BQ9ULI0 1458 aa14.4□□□□□ -0.1
SHPRH-201ENST00000275233 HOMER1Q86YM7 354 aa14.4□□□□□ -0.1
SHPRH-201ENST00000275233 ERC2O15083 957 aa14.4□□□□□ -0.1
SHPRH-201ENST00000275233 ANKRD20A12PQ8NF67 263 aa14.4□□□□□ -0.1
SHPRH-201ENST00000275233 SKOR2Q2VWA4 1001 aaPredicted RBP14.39□□□□□ -0.11
SHPRH-201ENST00000275233 GAPVD1Q14C86 1478 aa14.39□□□□□ -0.11
SHPRH-201ENST00000275233 CCDC70Q6NSX1 233 aa14.39□□□□□ -0.11
SHPRH-201ENST00000275233 IPO7O95373 1038 aaKnown RBP14.39□□□□□ -0.11
SHPRH-201ENST00000275233 C1orf115Q9H7X2 142 aa14.38□□□□□ -0.11
SHPRH-201ENST00000275233 HOOK1Q9UJC3 728 aaKnown RBP14.38□□□□□ -0.11
SHPRH-201ENST00000275233 SAFBQ15424 915 aaKnown RBP eCLIP14.38□□□□□ -0.11
SHPRH-201ENST00000275233 MTHFSP49914 203 aa14.37□□□□□ -0.11
SHPRH-201ENST00000275233 SASS6Q6UVJ0 657 aa14.37□□□□□ -0.11
SHPRH-201ENST00000275233 RRP12Q5JTH9 1297 aaKnown RBP14.37□□□□□ -0.11
SHPRH-201ENST00000275233 KIF6Q6ZMV9 814 aa14.37□□□□□ -0.11
SHPRH-201ENST00000275233 FSD1Q9BTV5 496 aa14.37□□□□□ -0.11
SHPRH-201ENST00000275233 SMARCA4P51532 1647 aa14.37□□□□□ -0.11
SHPRH-201ENST00000275233 ARHGAP5Q13017 1502 aa14.36□□□□□ -0.11
SHPRH-201ENST00000275233 ATP2B1P20020 1258 aa14.36□□□□□ -0.11
SHPRH-201ENST00000275233 TXNDC2Q86VQ3 553 aa14.36□□□□□ -0.11
SHPRH-201ENST00000275233 PROSER2Q86WR7 435 aaPredicted RBP14.36□□□□□ -0.11
SHPRH-201ENST00000275233 MIA2Q96PC5 1412 aa14.36□□□□□ -0.11
SHPRH-201ENST00000275233 GSE1Q14687 1217 aa14.36□□□□□ -0.11
SHPRH-201ENST00000275233 DDX54Q8TDD1 881 aaKnown RBP14.36□□□□□ -0.11
SHPRH-201ENST00000275233 AFAP1Q8N556 730 aa14.36□□□□□ -0.11
SHPRH-201ENST00000275233 FGD5Q6ZNL6 1462 aa14.35□□□□□ -0.11
SHPRH-201ENST00000275233 HSP90AB4PQ58FF6 505 aa14.35□□□□□ -0.11
SHPRH-201ENST00000275233 KIF7Q2M1P5 1343 aa14.35□□□□□ -0.11
SHPRH-201ENST00000275233 AQRO60306 1485 aaKnown RBP eCLIP14.35□□□□□ -0.115e-10■■■■■ 39.2
SHPRH-201ENST00000275233 CT47A1Q5JQC4 288 aaPredicted RBP14.35□□□□□ -0.11
SHPRH-201ENST00000275233 CFAP70Q5T0N1 1121 aa14.35□□□□□ -0.11
SHPRH-201ENST00000275233 ATP2B2Q01814 1243 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 ZFYVE27Q5T4F4 411 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 MYOM3Q5VTT5 1437 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.34□□□□□ -0.113e-9■■■■■ 73.7
SHPRH-201ENST00000275233 ADAMTS8Q9UP79 889 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 SURF6O75683 361 aaKnown RBP14.34□□□□□ -0.11
SHPRH-201ENST00000275233 EPS15P42566 896 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 GPRASP1Q5JY77 1395 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 TTLL5Q6EMB2 1281 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 PRAM1Q96QH2 718 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 PIP4K2BP78356 416 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 TMEM132AQ24JP5 1023 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 PDILTQ8N807 584 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 C22orf23Q9BZE7 217 aa14.34□□□□□ -0.11
SHPRH-201ENST00000275233 MAP4K4O95819 1239 aaPredicted RBP14.33□□□□□ -0.12
SHPRH-201ENST00000275233 CNTROBQ8N137 903 aa14.33□□□□□ -0.12
SHPRH-201ENST00000275233 CCDC73Q6ZRK6 1079 aa14.33□□□□□ -0.12
SHPRH-201ENST00000275233 CNNM1Q9NRU3 951 aa14.33□□□□□ -0.12
SHPRH-201ENST00000275233 SIL1Q9H173 461 aa14.32□□□□□ -0.12
SHPRH-201ENST00000275233 PRKAR2BP31323 418 aa14.32□□□□□ -0.12
SHPRH-201ENST00000275233 ODF2Q5BJF6 829 aa14.32□□□□□ -0.12
SHPRH-201ENST00000275233 BRMS1Q9HCU9 246 aa14.32□□□□□ -0.12
SHPRH-201ENST00000275233 NINLQ9Y2I6 1382 aa14.32□□□□□ -0.12
SHPRH-201ENST00000275233 MYL6BP14649 208 aa14.32□□□□□ -0.12
SHPRH-201ENST00000275233 CCDC30Q5VVM6 783 aa14.32□□□□□ -0.12
SHPRH-201ENST00000275233 TTC39AQ5SRH9 613 aa14.31□□□□□ -0.12
SHPRH-201ENST00000275233 CHMP5Q9NZZ3 219 aa14.31□□□□□ -0.12
SHPRH-201ENST00000275233 TBC1D2BQ9UPU7 963 aa14.31□□□□□ -0.12
SHPRH-201ENST00000275233 R3HCC1Q9Y3T6 440 aaKnown RBP14.31□□□□□ -0.12
SHPRH-201ENST00000275233 CDCA7LQ96GN5 454 aa14.31□□□□□ -0.12
SHPRH-201ENST00000275233 CCDC7Q96M83 1385 aa14.31□□□□□ -0.12
SHPRH-201ENST00000275233 CEBPZQ03701 1054 aaKnown RBP14.31□□□□□ -0.12
SHPRH-201ENST00000275233 HSP90AA2PQ14568 343 aaPredicted RBP14.31□□□□□ -0.12
SHPRH-201ENST00000275233 CCAR1Q8IX12 1150 aaKnown RBP14.31□□□□□ -0.12
SHPRH-201ENST00000275233 XPCQ01831 940 aaPredicted RBP14.3□□□□□ -0.12
SHPRH-201ENST00000275233 PLEKHO1Q53GL0 409 aaPredicted RBP14.3□□□□□ -0.12
SHPRH-201ENST00000275233 TOM1L2Q6ZVM7 507 aa14.3□□□□□ -0.12
SHPRH-201ENST00000275233 IFT57Q9NWB7 429 aa14.3□□□□□ -0.12
SHPRH-201ENST00000275233 SETQ01105 290 aaPredicted RBP14.29□□□□□ -0.12
SHPRH-201ENST00000275233 GPS2Q13227 327 aa14.29□□□□□ -0.12
SHPRH-201ENST00000275233 TSR2Q969E8 191 aaKnown RBP14.29□□□□□ -0.12
SHPRH-201ENST00000275233 CDC45O75419 566 aa14.29□□□□□ -0.12
SHPRH-201ENST00000275233 CABP4P57796 275 aa14.29□□□□□ -0.12
SHPRH-201ENST00000275233 EXOSC9Q06265 439 aaKnown RBP14.29□□□□□ -0.12
SHPRH-201ENST00000275233 TCP11L2Q8N4U5 519 aa14.29□□□□□ -0.12
SHPRH-201ENST00000275233 ZNF771Q7L3S4 317 aaPredicted RBP14.29□□□□□ -0.12
SHPRH-201ENST00000275233 CLASRPQ8N2M8 674 aaKnown RBP14.29□□□□□ -0.12
SHPRH-201ENST00000275233 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
SHPRH-201ENST00000275233 OLFM4Q6UX06 510 aa14.28□□□□□ -0.12
SHPRH-201ENST00000275233 XBP1P17861 261 aa14.28□□□□□ -0.12
SHPRH-201ENST00000275233 SKIDA1Q1XH10 827 aa14.28□□□□□ -0.12
SHPRH-201ENST00000275233 FGD6Q6ZV73 1430 aa14.28□□□□□ -0.12
SHPRH-201ENST00000275233 RNF214Q8ND24 703 aa14.28□□□□□ -0.12
SHPRH-201ENST00000275233 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
SHPRH-201ENST00000275233 CNTLNQ9NXG0 1405 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms