RNA–Protein interactions for RNA: ENST00000270570.8

SLC47A1-201, Transcript of solute carrier family 47 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC47A1, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-201ENST00000270570 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
SLC47A1-201ENST00000270570 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
SLC47A1-201ENST00000270570 APBB1O00213 710 aa16.72■□□□□ 0.27
SLC47A1-201ENST00000270570 HMOX1P09601 288 aa16.72■□□□□ 0.27
SLC47A1-201ENST00000270570 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
SLC47A1-201ENST00000270570 SOX12O15370 315 aa16.71■□□□□ 0.27
SLC47A1-201ENST00000270570 TBC1D2Q9BYX2 928 aa16.71■□□□□ 0.27
SLC47A1-201ENST00000270570 PIK3C2GO75747 1445 aa16.71■□□□□ 0.27
SLC47A1-201ENST00000270570 ZKSCAN2Q63HK3 967 aa16.71■□□□□ 0.27
SLC47A1-201ENST00000270570 HSP90AA1P07900 732 aaKnown RBP16.71■□□□□ 0.26
SLC47A1-201ENST00000270570 MYH16Q9H6N6 1097 aa16.71■□□□□ 0.26
SLC47A1-201ENST00000270570 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
SLC47A1-201ENST00000270570 SSH1Q8WYL5 1049 aa16.7■□□□□ 0.26
SLC47A1-201ENST00000270570 RIPK4P57078 832 aa16.69■□□□□ 0.26
SLC47A1-201ENST00000270570 NOB1Q9ULX3 412 aaKnown RBP16.69■□□□□ 0.26
SLC47A1-201ENST00000270570 ERVK-7P63135 1459 aa16.69■□□□□ 0.26
SLC47A1-201ENST00000270570 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
SLC47A1-201ENST00000270570 FANCAO15360 1455 aa16.67■□□□□ 0.26
SLC47A1-201ENST00000270570 TRIM27P14373 513 aa16.67■□□□□ 0.26
SLC47A1-201ENST00000270570 MLECQ14165 292 aa16.67■□□□□ 0.26
SLC47A1-201ENST00000270570 IQGAP3Q86VI3 1631 aa16.67■□□□□ 0.26
SLC47A1-201ENST00000270570 UNC13BO14795 1591 aa16.67■□□□□ 0.26
SLC47A1-201ENST00000270570 NUTM2FA1L443 756 aa16.67■□□□□ 0.26
SLC47A1-201ENST00000270570 MVPQ14764 893 aaKnown RBP16.67■□□□□ 0.26
SLC47A1-201ENST00000270570 TMEM57Q8N5G2 664 aa16.66■□□□□ 0.26
SLC47A1-201ENST00000270570 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
SLC47A1-201ENST00000270570 C22orf23Q9BZE7 217 aa16.65■□□□□ 0.26
SLC47A1-201ENST00000270570 CLTCL1P53675 1640 aa16.65■□□□□ 0.26
SLC47A1-201ENST00000270570 INSRP06213 1382 aa16.65■□□□□ 0.26
SLC47A1-201ENST00000270570 ADGRL1O94910 1474 aa16.65■□□□□ 0.26
SLC47A1-201ENST00000270570 EVC2Q86UK5 1308 aa16.64■□□□□ 0.26
SLC47A1-201ENST00000270570 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
SLC47A1-201ENST00000270570 PRAM1Q96QH2 718 aa16.64■□□□□ 0.25
SLC47A1-201ENST00000270570 PANK2Q9BZ23 570 aa16.64■□□□□ 0.25
SLC47A1-201ENST00000270570 CHD1O14646 1710 aa16.63■□□□□ 0.25
SLC47A1-201ENST00000270570 TMPOP42166 694 aaKnown RBP16.63■□□□□ 0.25
SLC47A1-201ENST00000270570 ANKRD45Q5TZF3 282 aa16.62■□□□□ 0.25
SLC47A1-201ENST00000270570 TBC1D32Q96NH3 1257 aa16.62■□□□□ 0.25
SLC47A1-201ENST00000270570 PTPRTO14522 1441 aa16.61■□□□□ 0.25
SLC47A1-201ENST00000270570 C14orf93Q9H972 538 aaKnown RBP16.61■□□□□ 0.25
SLC47A1-201ENST00000270570 WDR63Q8IWG1 891 aa16.6■□□□□ 0.25
SLC47A1-201ENST00000270570 CABP1Q9NZU7 370 aa16.6■□□□□ 0.25
SLC47A1-201ENST00000270570 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
SLC47A1-201ENST00000270570 SLC24A1O60721 1099 aa16.6■□□□□ 0.25
SLC47A1-201ENST00000270570 IDI1Q13907 227 aa16.6■□□□□ 0.25
SLC47A1-201ENST00000270570 HSCBQ8IWL3 235 aa16.6■□□□□ 0.25
SLC47A1-201ENST00000270570 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
SLC47A1-201ENST00000270570 HSP90AB1P08238 724 aaKnown RBP16.59■□□□□ 0.25
SLC47A1-201ENST00000270570 ATF7IPQ6VMQ6 1270 aa16.59■□□□□ 0.25
SLC47A1-201ENST00000270570 SYNMO15061 1565 aa16.59■□□□□ 0.25
SLC47A1-201ENST00000270570 TPRNQ4KMQ1 711 aa16.58■□□□□ 0.25
SLC47A1-201ENST00000270570 ABCC1P33527 1531 aa16.58■□□□□ 0.25
SLC47A1-201ENST00000270570 DCTN1Q14203 1278 aa16.58■□□□□ 0.24
SLC47A1-201ENST00000270570 FBXO31Q5XUX0 539 aaPredicted RBP16.58■□□□□ 0.24
SLC47A1-201ENST00000270570 PKNOX2Q96KN3 472 aa16.58■□□□□ 0.24
SLC47A1-201ENST00000270570 WAPLQ7Z5K2 1190 aa16.58■□□□□ 0.24
SLC47A1-201ENST00000270570 STAC3Q96MF2 364 aa16.58■□□□□ 0.24
SLC47A1-201ENST00000270570 DIAPH1O60610 1272 aaKnown RBP16.57■□□□□ 0.24
SLC47A1-201ENST00000270570 PLEKHG5O94827 1062 aa16.57■□□□□ 0.24
SLC47A1-201ENST00000270570 TRPM2O94759 1503 aa16.57■□□□□ 0.24
SLC47A1-201ENST00000270570 VGFO15240 615 aaPredicted RBP16.57■□□□□ 0.24
SLC47A1-201ENST00000270570 PLXNC1O60486 1568 aa16.56■□□□□ 0.24
SLC47A1-201ENST00000270570 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
SLC47A1-201ENST00000270570 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
SLC47A1-201ENST00000270570 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
SLC47A1-201ENST00000270570 TRIM35Q9UPQ4 493 aa16.56■□□□□ 0.24
SLC47A1-201ENST00000270570 KDM5AP29375 1690 aaKnown RBP16.55■□□□□ 0.24
SLC47A1-201ENST00000270570 GOLGA6L3A6NEY3 463 aa16.55■□□□□ 0.24
SLC47A1-201ENST00000270570 DDX19BQ9UMR2 479 aa16.55■□□□□ 0.24
SLC47A1-201ENST00000270570 FYB1O15117 783 aa16.55■□□□□ 0.24
SLC47A1-201ENST00000270570 NPC1L1Q9UHC9 1359 aa16.55■□□□□ 0.24
SLC47A1-201ENST00000270570 TSPYL6Q8N831 410 aa16.55■□□□□ 0.24
SLC47A1-201ENST00000270570 NAP1L5Q96NT1 182 aaPredicted RBP16.55■□□□□ 0.24
SLC47A1-201ENST00000270570 NCKAP5LQ9HCH0 1330 aa16.54■□□□□ 0.24
SLC47A1-201ENST00000270570 FAM83GA6ND36 823 aa16.54■□□□□ 0.24
SLC47A1-201ENST00000270570 ZCCHC11Q5TAX3 1644 aaKnown RBP16.54■□□□□ 0.24
SLC47A1-201ENST00000270570 ATP7AQ04656 1500 aa16.54■□□□□ 0.24
SLC47A1-201ENST00000270570 ZFYVE16Q7Z3T8 1539 aa16.54■□□□□ 0.24
SLC47A1-201ENST00000270570 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
SLC47A1-201ENST00000270570 NCLP19338 710 aaKnown RBP16.53■□□□□ 0.24
SLC47A1-201ENST00000270570 MCM4P33991 863 aa16.53■□□□□ 0.24
SLC47A1-201ENST00000270570 TRAK2O60296 914 aa16.53■□□□□ 0.24
SLC47A1-201ENST00000270570 RRS1Q15050 365 aaKnown RBP16.53■□□□□ 0.24
SLC47A1-201ENST00000270570 PHACTR3Q96KR7 559 aa16.53■□□□□ 0.24
SLC47A1-201ENST00000270570 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
SLC47A1-201ENST00000270570 EMILIN1Q9Y6C2 1016 aa16.53■□□□□ 0.24
SLC47A1-201ENST00000270570 FOXD4L5Q5VV16 416 aaPredicted RBP16.53■□□□□ 0.24
SLC47A1-201ENST00000270570 FOXD4L4Q8WXT5 416 aaPredicted RBP16.53■□□□□ 0.24
SLC47A1-201ENST00000270570 A0A1W2PP64 1363 aa16.52■□□□□ 0.24
SLC47A1-201ENST00000270570 RRAGDQ9NQL2 400 aaPredicted RBP16.52■□□□□ 0.24
SLC47A1-201ENST00000270570 HDGFL2Q7Z4V5 671 aaPredicted RBP16.52■□□□□ 0.23
SLC47A1-201ENST00000270570 NGEFQ8N5V2 710 aa16.52■□□□□ 0.23
SLC47A1-201ENST00000270570 IQGAP1P46940 1657 aa16.52■□□□□ 0.23
SLC47A1-201ENST00000270570 CDK19Q9BWU1 502 aa16.51■□□□□ 0.23
SLC47A1-201ENST00000270570 ANTXR1Q9H6X2 564 aa16.51■□□□□ 0.23
SLC47A1-201ENST00000270570 RNF17Q9BXT8 1623 aaKnown RBP16.51■□□□□ 0.23
SLC47A1-201ENST00000270570 XRCC6P12956 609 aaKnown RBP eCLIP16.5■□□□□ 0.23
SLC47A1-201ENST00000270570 ABCA6Q8N139 1617 aa16.5■□□□□ 0.23
SLC47A1-201ENST00000270570 NPATQ14207 1427 aa16.5■□□□□ 0.23
SLC47A1-201ENST00000270570 SPHKAPQ2M3C7 1700 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms