RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 RTEL1-TNFRSF6BF6WH68 1400 aa21.67■■□□□ 1.06
LRRC56-201ENST00000270115 PLCH2O75038 1416 aa21.66■■□□□ 1.06
LRRC56-201ENST00000270115 EFCAB2Q5VUJ9 269 aa21.66■■□□□ 1.06
LRRC56-201ENST00000270115 ASXL1Q8IXJ9 1541 aa21.65■■□□□ 1.06
LRRC56-201ENST00000270115 MYO5CQ9NQX4 1742 aa21.64■■□□□ 1.05
LRRC56-201ENST00000270115 ARID3AQ99856 593 aa21.63■■□□□ 1.05
LRRC56-201ENST00000270115 FAM13BQ9NYF5 915 aa21.63■■□□□ 1.05
LRRC56-201ENST00000270115 HSP90AB1P08238 724 aaKnown RBP21.62■■□□□ 1.05
LRRC56-201ENST00000270115 AFAP1Q8N556 730 aa21.62■■□□□ 1.05
LRRC56-201ENST00000270115 GBP4Q96PP9 640 aa21.62■■□□□ 1.05
LRRC56-201ENST00000270115 LAMC1P11047 1609 aa21.61■■□□□ 1.05
LRRC56-201ENST00000270115 ZMYM3Q14202 1370 aa21.61■■□□□ 1.05
LRRC56-201ENST00000270115 NASPP49321 788 aaPredicted RBP21.61■■□□□ 1.05
LRRC56-201ENST00000270115 RIPK4P57078 832 aa21.61■■□□□ 1.05
LRRC56-201ENST00000270115 DDIT3P35638 169 aa21.6■■□□□ 1.05
LRRC56-201ENST00000270115 ZSCAN30Q86W11 494 aa21.6■■□□□ 1.05
LRRC56-201ENST00000270115 TRAPPC8Q9Y2L5 1435 aa21.6■■□□□ 1.05
LRRC56-201ENST00000270115 MSNP26038 577 aaKnown RBP21.6■■□□□ 1.05
LRRC56-201ENST00000270115 CDCA8Q53HL2 280 aa21.6■■□□□ 1.05
LRRC56-201ENST00000270115 CALD1Q05682 793 aaKnown RBP21.59■■□□□ 1.05
LRRC56-201ENST00000270115 CCDC173Q0VFZ6 552 aa21.59■■□□□ 1.05
LRRC56-201ENST00000270115 R3HCC1Q9Y3T6 440 aaKnown RBP21.59■■□□□ 1.05
LRRC56-201ENST00000270115 OFD1O75665 1012 aa21.59■■□□□ 1.05
LRRC56-201ENST00000270115 TNNT2P45379 298 aaPredicted RBP21.59■■□□□ 1.05
LRRC56-201ENST00000270115 AAMPQ13685 434 aa21.58■■□□□ 1.05
LRRC56-201ENST00000270115 PRDM4Q9UKN5 801 aa21.58■■□□□ 1.05
LRRC56-201ENST00000270115 SKOR2Q2VWA4 1001 aaPredicted RBP21.57■■□□□ 1.04
LRRC56-201ENST00000270115 ANP32BQ92688 251 aaKnown RBP21.57■■□□□ 1.04
LRRC56-201ENST00000270115 MVPQ14764 893 aaKnown RBP21.57■■□□□ 1.04
LRRC56-201ENST00000270115 FTSJ3Q8IY81 847 aaKnown RBP21.57■■□□□ 1.04
LRRC56-201ENST00000270115 RAB3GAP1Q15042 981 aa21.56■■□□□ 1.04
LRRC56-201ENST00000270115 EIF2AK4Q9P2K8 1649 aaKnown RBP21.55■■□□□ 1.04
LRRC56-201ENST00000270115 NGEFQ8N5V2 710 aa21.55■■□□□ 1.04
LRRC56-201ENST00000270115 TCP11L2Q8N4U5 519 aa21.55■■□□□ 1.04
LRRC56-201ENST00000270115 PPP1R9BQ96SB3 815 aa21.55■■□□□ 1.04
LRRC56-201ENST00000270115 ASXL2Q76L83 1435 aa21.55■■□□□ 1.04
LRRC56-201ENST00000270115 SMC5Q8IY18 1101 aa21.54■■□□□ 1.04
LRRC56-201ENST00000270115 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.54■■□□□ 1.04
LRRC56-201ENST00000270115 NCOA3Q9Y6Q9 1424 aa21.54■■□□□ 1.04
LRRC56-201ENST00000270115 PLXNC1O60486 1568 aa21.53■■□□□ 1.04
LRRC56-201ENST00000270115 CARD14Q9BXL6 1004 aa21.53■■□□□ 1.04
LRRC56-201ENST00000270115 CD2BP2O95400 341 aaKnown RBP21.52■■□□□ 1.04
LRRC56-201ENST00000270115 SYNMO15061 1565 aa21.52■■□□□ 1.04
LRRC56-201ENST00000270115 NPM1P06748 294 aaKnown RBP eCLIP21.52■■□□□ 1.03
LRRC56-201ENST00000270115 SSFA2P28290 1259 aa21.52■■□□□ 1.03
LRRC56-201ENST00000270115 DDX49Q9Y6V7 483 aaKnown RBP21.52■■□□□ 1.03
LRRC56-201ENST00000270115 DZIP1LQ8IYY4 767 aaKnown RBP21.51■■□□□ 1.03
LRRC56-201ENST00000270115 SNX21Q969T3 373 aa21.51■■□□□ 1.03
LRRC56-201ENST00000270115 CIZ1Q9ULV3 898 aaPredicted RBP21.51■■□□□ 1.03
LRRC56-201ENST00000270115 ABCC1P33527 1531 aa21.5■■□□□ 1.03
LRRC56-201ENST00000270115 NPC1L1Q9UHC9 1359 aa21.5■■□□□ 1.03
LRRC56-201ENST00000270115 XPCQ01831 940 aaPredicted RBP21.5■■□□□ 1.03
LRRC56-201ENST00000270115 ZKSCAN2Q63HK3 967 aa21.5■■□□□ 1.03
LRRC56-201ENST00000270115 SPAG9O60271 1321 aaKnown RBP21.5■■□□□ 1.03
LRRC56-201ENST00000270115 CYB5RLQ6IPT4 315 aa21.49■■□□□ 1.03
LRRC56-201ENST00000270115 MAST1Q9Y2H9 1570 aa21.49■■□□□ 1.03
LRRC56-201ENST00000270115 A0A0U1RQG5 324 aaPredicted RBP21.49■■□□□ 1.03
LRRC56-201ENST00000270115 NCLP19338 710 aaKnown RBP21.49■■□□□ 1.03
LRRC56-201ENST00000270115 RBM25P49756 843 aaKnown RBP21.49■■□□□ 1.03
LRRC56-201ENST00000270115 ITPRIPQ8IWB1 547 aa21.49■■□□□ 1.03
LRRC56-201ENST00000270115 RUNDC1Q96C34 613 aa21.49■■□□□ 1.03
LRRC56-201ENST00000270115 RBM42Q9BTD8 480 aaKnown RBP21.48■■□□□ 1.03
LRRC56-201ENST00000270115 UQCRHLA0A096LP55 91 aa21.47■■□□□ 1.03
LRRC56-201ENST00000270115 UQCRHP07919 91 aa21.47■■□□□ 1.03
LRRC56-201ENST00000270115 LNPKQ9C0E8 428 aa21.47■■□□□ 1.03
LRRC56-201ENST00000270115 GOLGA6L22H0YM25 854 aa21.46■■□□□ 1.03
LRRC56-201ENST00000270115 FANCAO15360 1455 aa21.46■■□□□ 1.03
LRRC56-201ENST00000270115 PTMSP20962 102 aa21.45■■□□□ 1.02
LRRC56-201ENST00000270115 WDR63Q8IWG1 891 aa21.44■■□□□ 1.02
LRRC56-201ENST00000270115 TSR2Q969E8 191 aaKnown RBP21.44■■□□□ 1.02
LRRC56-201ENST00000270115 PRDM10Q9NQV6 1147 aa21.44■■□□□ 1.02
LRRC56-201ENST00000270115 SMC4Q9NTJ3 1288 aa21.44■■□□□ 1.02
LRRC56-201ENST00000270115 RNF17Q9BXT8 1623 aaKnown RBP21.44■■□□□ 1.02
LRRC56-201ENST00000270115 KIF2CQ99661 725 aa21.43■■□□□ 1.02
LRRC56-201ENST00000270115 HDAC1Q13547 482 aaPredicted RBP21.43■■□□□ 1.02
LRRC56-201ENST00000270115 GAS2L2Q8NHY3 880 aa21.43■■□□□ 1.02
LRRC56-201ENST00000270115 SCAF11Q99590 1463 aaKnown RBP21.43■■□□□ 1.02
LRRC56-201ENST00000270115 TRIM27P14373 513 aa21.42■■□□□ 1.02
LRRC56-201ENST00000270115 CAVIN1Q6NZI2 390 aaKnown RBP21.42■■□□□ 1.02
LRRC56-201ENST00000270115 K7ELQ4 463 aaPredicted RBP21.42■■□□□ 1.02
LRRC56-201ENST00000270115 KLHL40Q2TBA0 621 aa21.42■■□□□ 1.02
LRRC56-201ENST00000270115 MORC1Q86VD1 984 aa21.42■■□□□ 1.02
LRRC56-201ENST00000270115 SCAPERQ9BY12 1400 aa21.42■■□□□ 1.02
LRRC56-201ENST00000270115 MYOM1P52179 1685 aa21.42■■□□□ 1.02
LRRC56-201ENST00000270115 BAG4O95429 457 aaKnown RBP21.42■■□□□ 1.02
LRRC56-201ENST00000270115 MAP7D2Q96T17 732 aa21.42■■□□□ 1.02
LRRC56-201ENST00000270115 DUOX2Q9NRD8 1548 aa21.41■■□□□ 1.02
LRRC56-201ENST00000270115 TERF1P54274 439 aa21.41■■□□□ 1.02
LRRC56-201ENST00000270115 POLR3AO14802 1390 aaPredicted RBP21.41■■□□□ 1.02
LRRC56-201ENST00000270115 MCTP1Q6DN14 999 aa21.41■■□□□ 1.02
LRRC56-201ENST00000270115 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.4■■□□□ 1.02
LRRC56-201ENST00000270115 ABCA9Q8IUA7 1624 aa21.4■■□□□ 1.02
LRRC56-201ENST00000270115 ZBTB7CA1YPR0 619 aa21.39■■□□□ 1.02
LRRC56-201ENST00000270115 RBSNQ9H1K0 784 aa21.39■■□□□ 1.02
LRRC56-201ENST00000270115 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.01
LRRC56-201ENST00000270115 ZHX1Q9UKY1 873 aaPredicted RBP21.39■■□□□ 1.01
LRRC56-201ENST00000270115 NOL7Q9UMY1 257 aaKnown RBP21.39■■□□□ 1.01
LRRC56-201ENST00000270115 IQGAP1P46940 1657 aa21.39■■□□□ 1.01
LRRC56-201ENST00000270115 DDX19BQ9UMR2 479 aa21.38■■□□□ 1.01
LRRC56-201ENST00000270115 ADGRL1O94910 1474 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms