RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 SPINK5Q9NQ38 1064 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF11A-201ENST00000269485 CDK19Q9BWU1 502 aa18.24■□□□□ 0.51
TNFRSF11A-201ENST00000269485 FTSJ3Q8IY81 847 aaKnown RBP18.23■□□□□ 0.51
TNFRSF11A-201ENST00000269485 ZMYND15Q9H091 742 aa18.23■□□□□ 0.51
TNFRSF11A-201ENST00000269485 SCAF11Q99590 1463 aaKnown RBP18.23■□□□□ 0.51
TNFRSF11A-201ENST00000269485 TCP11L2Q8N4U5 519 aa18.23■□□□□ 0.51
TNFRSF11A-201ENST00000269485 NSD3Q9BZ95 1437 aa18.23■□□□□ 0.51
TNFRSF11A-201ENST00000269485 TNNQ9UQP3 1299 aa18.22■□□□□ 0.51
TNFRSF11A-201ENST00000269485 SLC52A1Q9NWF4 448 aa18.21■□□□□ 0.51
TNFRSF11A-201ENST00000269485 HDGFL2Q7Z4V5 671 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF11A-201ENST00000269485 NGDNQ8NEJ9 315 aaKnown RBP18.21■□□□□ 0.51
TNFRSF11A-201ENST00000269485 NAP1L5Q96NT1 182 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF11A-201ENST00000269485 DCTN1Q14203 1278 aa18.2■□□□□ 0.5
TNFRSF11A-201ENST00000269485 MAGI2Q86UL8 1455 aa18.19■□□□□ 0.5
TNFRSF11A-201ENST00000269485 CGNL1Q0VF96 1302 aa18.19■□□□□ 0.5
TNFRSF11A-201ENST00000269485 E9PCH4 1651 aa18.18■□□□□ 0.5
TNFRSF11A-201ENST00000269485 CLTCL1P53675 1640 aa18.17■□□□□ 0.5
TNFRSF11A-201ENST00000269485 COL17A1Q9UMD9 1497 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF11A-201ENST00000269485 NME9Q86XW9 330 aa18.16■□□□□ 0.5
TNFRSF11A-201ENST00000269485 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF11A-201ENST00000269485 TERF2IPQ9NYB0 399 aa18.15■□□□□ 0.5
TNFRSF11A-201ENST00000269485 PARD3Q8TEW0 1356 aa18.15■□□□□ 0.5
TNFRSF11A-201ENST00000269485 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
TNFRSF11A-201ENST00000269485 SMC4Q9NTJ3 1288 aa18.15■□□□□ 0.5
TNFRSF11A-201ENST00000269485 MIS18AQ9NYP9 233 aa18.15■□□□□ 0.5
TNFRSF11A-201ENST00000269485 EMILIN1Q9Y6C2 1016 aa18.15■□□□□ 0.5
TNFRSF11A-201ENST00000269485 PLXNC1O60486 1568 aa18.14■□□□□ 0.49
TNFRSF11A-201ENST00000269485 GPRASP1Q5JY77 1395 aa18.14■□□□□ 0.49
TNFRSF11A-201ENST00000269485 IQGAP3Q86VI3 1631 aa18.14■□□□□ 0.49
TNFRSF11A-201ENST00000269485 RIPK4P57078 832 aa18.14■□□□□ 0.49
TNFRSF11A-201ENST00000269485 TPRNQ4KMQ1 711 aa18.14■□□□□ 0.49
TNFRSF11A-201ENST00000269485 GSE1Q14687 1217 aa18.13■□□□□ 0.49
TNFRSF11A-201ENST00000269485 ABCA9Q8IUA7 1624 aa18.12■□□□□ 0.49
TNFRSF11A-201ENST00000269485 UNC13BO14795 1591 aa18.12■□□□□ 0.49
TNFRSF11A-201ENST00000269485 C1orf115Q9H7X2 142 aa18.11■□□□□ 0.49
TNFRSF11A-201ENST00000269485 KIDINS220Q9ULH0 1771 aa18.1■□□□□ 0.49
TNFRSF11A-201ENST00000269485 PLEKHH1Q9ULM0 1364 aa18.1■□□□□ 0.49
TNFRSF11A-201ENST00000269485 PTPRTO14522 1441 aa18.09■□□□□ 0.49
TNFRSF11A-201ENST00000269485 CEP152O94986 1710 aa18.09■□□□□ 0.49
TNFRSF11A-201ENST00000269485 PRKAR2BP31323 418 aa18.09■□□□□ 0.49
TNFRSF11A-201ENST00000269485 ARID3AQ99856 593 aa18.09■□□□□ 0.49
TNFRSF11A-201ENST00000269485 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
TNFRSF11A-201ENST00000269485 EID1Q9Y6B2 187 aa18.09■□□□□ 0.49
TNFRSF11A-201ENST00000269485 FAM83GA6ND36 823 aa18.08■□□□□ 0.48
TNFRSF11A-201ENST00000269485 SLC4A10Q6U841 1118 aa18.07■□□□□ 0.48
TNFRSF11A-201ENST00000269485 TRPM1Q7Z4N2 1603 aa18.07■□□□□ 0.48
TNFRSF11A-201ENST00000269485 RSPH6AQ9H0K4 717 aa18.07■□□□□ 0.48
TNFRSF11A-201ENST00000269485 TRPM2O94759 1503 aa18.07■□□□□ 0.48
TNFRSF11A-201ENST00000269485 EXOSC9Q06265 439 aaKnown RBP18.06■□□□□ 0.48
TNFRSF11A-201ENST00000269485 ZMYM3Q14202 1370 aa18.06■□□□□ 0.48
TNFRSF11A-201ENST00000269485 RPGRIP1LQ68CZ1 1315 aa18.05■□□□□ 0.48
TNFRSF11A-201ENST00000269485 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
TNFRSF11A-201ENST00000269485 PDE4AP27815 886 aa18.05■□□□□ 0.48
TNFRSF11A-201ENST00000269485 AMPHP49418 695 aa18.05■□□□□ 0.48
TNFRSF11A-201ENST00000269485 USHBP1Q8N6Y0 703 aa18.05■□□□□ 0.48
TNFRSF11A-201ENST00000269485 SMG6Q86US8 1419 aaKnown RBP18.05■□□□□ 0.48
TNFRSF11A-201ENST00000269485 FYB1O15117 783 aa18.04■□□□□ 0.48
TNFRSF11A-201ENST00000269485 MLH3Q9UHC1 1453 aa18.04■□□□□ 0.48
TNFRSF11A-201ENST00000269485 LTKP29376 864 aa18.04■□□□□ 0.48
TNFRSF11A-201ENST00000269485 NUDT16Q96DE0 195 aaKnown RBP18.03■□□□□ 0.48
TNFRSF11A-201ENST00000269485 COG3Q96JB2 828 aa18.03■□□□□ 0.48
TNFRSF11A-201ENST00000269485 RIMBP3CA6NJZ7 1639 aa18.03■□□□□ 0.48
TNFRSF11A-201ENST00000269485 RIMBP3BA6NNM3 1639 aa18.03■□□□□ 0.48
TNFRSF11A-201ENST00000269485 RIMBP3Q9UFD9 1639 aa18.03■□□□□ 0.48
TNFRSF11A-201ENST00000269485 PPRC1Q5VV67 1664 aaKnown RBP18.03■□□□□ 0.48
TNFRSF11A-201ENST00000269485 HECW2Q9P2P5 1572 aa18.02■□□□□ 0.48
TNFRSF11A-201ENST00000269485 WWC1Q8IX03 1113 aa18.02■□□□□ 0.48
TNFRSF11A-201ENST00000269485 SLKQ9H2G2 1235 aaPredicted RBP18.02■□□□□ 0.48
TNFRSF11A-201ENST00000269485 HDGFP51858 240 aaKnown RBP18.02■□□□□ 0.47
TNFRSF11A-201ENST00000269485 NFKBIBQ15653 356 aa18.02■□□□□ 0.47
TNFRSF11A-201ENST00000269485 ERVK-7P63135 1459 aa18.02■□□□□ 0.47
TNFRSF11A-201ENST00000269485 HSP90AA2PQ14568 343 aaPredicted RBP18.01■□□□□ 0.47
TNFRSF11A-201ENST00000269485 DUSP27Q5VZP5 1158 aa18.01■□□□□ 0.47
TNFRSF11A-201ENST00000269485 NLRP6P59044 892 aa18.01■□□□□ 0.47
TNFRSF11A-201ENST00000269485 PDE3BQ13370 1112 aa18.01■□□□□ 0.47
TNFRSF11A-201ENST00000269485 INO80Q9ULG1 1556 aaPredicted RBP18.01■□□□□ 0.47
TNFRSF11A-201ENST00000269485 EFCAB6Q5THR3 1501 aa18■□□□□ 0.47
TNFRSF11A-201ENST00000269485 SPHKAPQ2M3C7 1700 aa18■□□□□ 0.47
TNFRSF11A-201ENST00000269485 ABCC3O15438 1527 aa18■□□□□ 0.47
TNFRSF11A-201ENST00000269485 A0A1W2PP64 1363 aa18■□□□□ 0.47
TNFRSF11A-201ENST00000269485 HAP1P54257 671 aaPredicted RBP18■□□□□ 0.47
TNFRSF11A-201ENST00000269485 KRT24Q2M2I5 525 aa18■□□□□ 0.47
TNFRSF11A-201ENST00000269485 NEO1Q92859 1461 aa18■□□□□ 0.47
TNFRSF11A-201ENST00000269485 RUNDC1Q96C34 613 aa18■□□□□ 0.47
TNFRSF11A-201ENST00000269485 ABCA6Q8N139 1617 aa18■□□□□ 0.47
TNFRSF11A-201ENST00000269485 SULT6B1Q6IMI4 303 aa17.99■□□□□ 0.47
TNFRSF11A-201ENST00000269485 LRPPRCP42704 1394 aaKnown RBP17.99■□□□□ 0.47
TNFRSF11A-201ENST00000269485 NGEFQ8N5V2 710 aa17.99■□□□□ 0.47
TNFRSF11A-201ENST00000269485 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
TNFRSF11A-201ENST00000269485 ZNF330Q9Y3S2 320 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF11A-201ENST00000269485 AMOTL2Q9Y2J4 779 aa17.98■□□□□ 0.47
TNFRSF11A-201ENST00000269485 TET3O43151 1660 aa17.98■□□□□ 0.47
TNFRSF11A-201ENST00000269485 RNF17Q9BXT8 1623 aaKnown RBP17.98■□□□□ 0.47
TNFRSF11A-201ENST00000269485 AEBP1Q8IUX7 1158 aa17.98■□□□□ 0.47
TNFRSF11A-201ENST00000269485 MCM10Q7L590 875 aa17.97■□□□□ 0.47
TNFRSF11A-201ENST00000269485 USP35Q9P2H5 1018 aa17.97■□□□□ 0.47
TNFRSF11A-201ENST00000269485 RIMS2Q9UQ26 1411 aa17.97■□□□□ 0.47
TNFRSF11A-201ENST00000269485 METP08581 1390 aa17.96■□□□□ 0.47
TNFRSF11A-201ENST00000269485 EIF2AK4Q9P2K8 1649 aaKnown RBP17.96■□□□□ 0.47
TNFRSF11A-201ENST00000269485 SLFN5Q08AF3 891 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms