RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SYAP1Q96A49 352 aaPredicted RBP19.03■□□□□ 0.64
TIMP3-201ENST00000266085 FOXD4L1Q9NU39 408 aa19.03■□□□□ 0.64
TIMP3-201ENST00000266085 HSP90B1P14625 803 aaKnown RBP19.02■□□□□ 0.64
TIMP3-201ENST00000266085 AEBP2Q6ZN18 517 aaPredicted RBP19.02■□□□□ 0.64
TIMP3-201ENST00000266085 FBXO31Q5XUX0 539 aaPredicted RBP19.02■□□□□ 0.64
TIMP3-201ENST00000266085 IDI1Q13907 227 aa19.02■□□□□ 0.64
TIMP3-201ENST00000266085 MSNP26038 577 aaKnown RBP19.02■□□□□ 0.63
TIMP3-201ENST00000266085 SULT6B1Q6IMI4 303 aa19.02■□□□□ 0.63
TIMP3-201ENST00000266085 G3V3G9 751 aa19.01■□□□□ 0.63
TIMP3-201ENST00000266085 DCAF8Q5TAQ9 597 aa19.01■□□□□ 0.63
TIMP3-201ENST00000266085 GAS2L2Q8NHY3 880 aa19.01■□□□□ 0.63
TIMP3-201ENST00000266085 CCDC61Q9Y6R9 512 aa19.01■□□□□ 0.63
TIMP3-201ENST00000266085 CCDC184Q52MB2 194 aa19.01■□□□□ 0.63
TIMP3-201ENST00000266085 TOMM22Q9NS69 142 aa19.01■□□□□ 0.63
TIMP3-201ENST00000266085 DRC7Q8IY82 874 aa19■□□□□ 0.63
TIMP3-201ENST00000266085 ATAD2Q6PL18 1390 aa19■□□□□ 0.63
TIMP3-201ENST00000266085 EXOSC9Q06265 439 aaKnown RBP18.99■□□□□ 0.63
TIMP3-201ENST00000266085 AIMP1Q12904 312 aaKnown RBP18.99■□□□□ 0.63
TIMP3-201ENST00000266085 WAPLQ7Z5K2 1190 aa18.99■□□□□ 0.63
TIMP3-201ENST00000266085 AAMPQ13685 434 aa18.99■□□□□ 0.63
TIMP3-201ENST00000266085 FANCAO15360 1455 aa18.98■□□□□ 0.63
TIMP3-201ENST00000266085 LNPKQ9C0E8 428 aa18.97■□□□□ 0.63
TIMP3-201ENST00000266085 MSH5O43196 834 aa18.97■□□□□ 0.63
TIMP3-201ENST00000266085 KIF3AQ9Y496 699 aa18.97■□□□□ 0.63
TIMP3-201ENST00000266085 NUDT16Q96DE0 195 aaKnown RBP18.97■□□□□ 0.63
TIMP3-201ENST00000266085 ADGRF5Q8IZF2 1346 aa18.97■□□□□ 0.63
TIMP3-201ENST00000266085 MEX3CQ5U5Q3 659 aaKnown RBP18.97■□□□□ 0.63
TIMP3-201ENST00000266085 REC8O95072 547 aa18.96■□□□□ 0.63
TIMP3-201ENST00000266085 CHAF1AQ13111 956 aaPredicted RBP18.96■□□□□ 0.63
TIMP3-201ENST00000266085 PLEKHO1Q53GL0 409 aaPredicted RBP18.96■□□□□ 0.63
TIMP3-201ENST00000266085 DIAPH3Q9NSV4 1193 aa18.96■□□□□ 0.63
TIMP3-201ENST00000266085 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
TIMP3-201ENST00000266085 C11orf95C9JLR9 678 aaPredicted RBP18.96■□□□□ 0.63
TIMP3-201ENST00000266085 CEBPAP49715 358 aaPredicted RBP18.96■□□□□ 0.63
TIMP3-201ENST00000266085 RIC3Q7Z5B4 369 aa18.96■□□□□ 0.63
TIMP3-201ENST00000266085 GPATCH8Q9UKJ3 1502 aaKnown RBP18.96■□□□□ 0.63
TIMP3-201ENST00000266085 TSR2Q969E8 191 aaKnown RBP18.96■□□□□ 0.63
TIMP3-201ENST00000266085 IFIT2P09913 472 aaKnown RBP18.95■□□□□ 0.62
TIMP3-201ENST00000266085 RRS1Q15050 365 aaKnown RBP18.95■□□□□ 0.62
TIMP3-201ENST00000266085 G3BP1Q13283 466 aaKnown RBP eCLIP18.95■□□□□ 0.62
TIMP3-201ENST00000266085 CSPP1Q1MSJ5 1256 aa18.94■□□□□ 0.62
TIMP3-201ENST00000266085 DENND4BO75064 1496 aaPredicted RBP18.94■□□□□ 0.62
TIMP3-201ENST00000266085 ATP10BO94823 1461 aa18.94■□□□□ 0.62
TIMP3-201ENST00000266085 STRN4Q9NRL3 753 aa18.94■□□□□ 0.62
TIMP3-201ENST00000266085 RUFY2Q8WXA3 655 aa18.94■□□□□ 0.62
TIMP3-201ENST00000266085 SLC4A3P48751 1232 aa18.93■□□□□ 0.62
TIMP3-201ENST00000266085 TWISTNBQ3B726 338 aaPredicted RBP18.93■□□□□ 0.62
TIMP3-201ENST00000266085 CCDC34Q96HJ3 373 aa18.93■□□□□ 0.62
TIMP3-201ENST00000266085 XPCQ01831 940 aaPredicted RBP18.92■□□□□ 0.62
TIMP3-201ENST00000266085 LRRFIP1Q32MZ4 808 aaKnown RBP18.92■□□□□ 0.62
TIMP3-201ENST00000266085 GOLGA6L3A6NEY3 463 aa18.91■□□□□ 0.62
TIMP3-201ENST00000266085 DHX29Q7Z478 1369 aaKnown RBP18.91■□□□□ 0.62
TIMP3-201ENST00000266085 UBTFL1P0CB47 393 aaPredicted RBP18.91■□□□□ 0.62
TIMP3-201ENST00000266085 CCDC30Q5VVM6 783 aa18.91■□□□□ 0.62
TIMP3-201ENST00000266085 NSD3Q9BZ95 1437 aa18.9■□□□□ 0.62
TIMP3-201ENST00000266085 HSP90AB4PQ58FF6 505 aa18.9■□□□□ 0.62
TIMP3-201ENST00000266085 TATP17735 454 aaPredicted RBP18.9■□□□□ 0.62
TIMP3-201ENST00000266085 ZKSCAN1P17029 563 aaPredicted RBP18.89■□□□□ 0.61
TIMP3-201ENST00000266085 FOXD4L5Q5VV16 416 aaPredicted RBP18.89■□□□□ 0.61
TIMP3-201ENST00000266085 FOXD4L4Q8WXT5 416 aaPredicted RBP18.89■□□□□ 0.61
TIMP3-201ENST00000266085 ZNF530Q6P9A1 599 aaPredicted RBP18.89■□□□□ 0.61
TIMP3-201ENST00000266085 KIAA2012Q0VF49 1180 aa18.89■□□□□ 0.61
TIMP3-201ENST00000266085 BCAR3O75815 825 aa18.88■□□□□ 0.61
TIMP3-201ENST00000266085 CHMP4CQ96CF2 233 aa18.88■□□□□ 0.61
TIMP3-201ENST00000266085 PRDM11Q9NQV5 511 aa18.88■□□□□ 0.61
TIMP3-201ENST00000266085 NUP153P49790 1475 aaKnown RBP18.87■□□□□ 0.61
TIMP3-201ENST00000266085 DDX11L8A8MPP1 907 aa18.87■□□□□ 0.61
TIMP3-201ENST00000266085 TOM1L2Q6ZVM7 507 aa18.86■□□□□ 0.61
TIMP3-201ENST00000266085 ANO2Q9NQ90 1003 aa18.86■□□□□ 0.61
TIMP3-201ENST00000266085 SMG6Q86US8 1419 aaKnown RBP18.86■□□□□ 0.61
TIMP3-201ENST00000266085 HDGFL1Q5TGJ6 251 aa18.86■□□□□ 0.61
TIMP3-201ENST00000266085 GNAI3P08754 354 aa18.86■□□□□ 0.61
TIMP3-201ENST00000266085 RPRD2Q5VT52 1461 aaKnown RBP18.86■□□□□ 0.61
TIMP3-201ENST00000266085 WDR63Q8IWG1 891 aa18.86■□□□□ 0.61
TIMP3-201ENST00000266085 ATP6V1DQ9Y5K8 247 aa18.86■□□□□ 0.61
TIMP3-201ENST00000266085 ZC3H6P61129 1189 aaKnown RBP18.85■□□□□ 0.61
TIMP3-201ENST00000266085 PDE3AQ14432 1141 aa18.85■□□□□ 0.61
TIMP3-201ENST00000266085 SF3A1Q15459 793 aaKnown RBP18.85■□□□□ 0.61
TIMP3-201ENST00000266085 FCHSD2O94868 740 aa18.85■□□□□ 0.61
TIMP3-201ENST00000266085 SLC4A2P04920 1241 aa18.85■□□□□ 0.61
TIMP3-201ENST00000266085 AMOTL2Q9Y2J4 779 aa18.85■□□□□ 0.61
TIMP3-201ENST00000266085 FANCIQ9NVI1 1328 aa18.85■□□□□ 0.61
TIMP3-201ENST00000266085 PTPRKQ15262 1439 aa18.85■□□□□ 0.61
TIMP3-201ENST00000266085 FAM184AQ8NB25 1140 aa18.84■□□□□ 0.61
TIMP3-201ENST00000266085 PLCH2O75038 1416 aa18.84■□□□□ 0.61
TIMP3-201ENST00000266085 ASXL2Q76L83 1435 aa18.83■□□□□ 0.61
TIMP3-201ENST00000266085 INTS3Q68E01 1043 aaKnown RBP18.83■□□□□ 0.61
TIMP3-201ENST00000266085 DDX54Q8TDD1 881 aaKnown RBP18.83■□□□□ 0.61
TIMP3-201ENST00000266085 RBM33Q96EV2 1170 aaKnown RBP18.83■□□□□ 0.61
TIMP3-201ENST00000266085 H3BQV1 296 aa18.83■□□□□ 0.6
TIMP3-201ENST00000266085 IFFO2Q5TF58 517 aa18.83■□□□□ 0.6
TIMP3-201ENST00000266085 NEUROD6Q96NK8 337 aa18.83■□□□□ 0.6
TIMP3-201ENST00000266085 RBM42Q9BTD8 480 aaKnown RBP18.83■□□□□ 0.6
TIMP3-201ENST00000266085 NOB1Q9ULX3 412 aaKnown RBP18.83■□□□□ 0.6
TIMP3-201ENST00000266085 DDX49Q9Y6V7 483 aaKnown RBP18.83■□□□□ 0.6
TIMP3-201ENST00000266085 PHF14O94880 888 aa18.82■□□□□ 0.6
TIMP3-201ENST00000266085 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
TIMP3-201ENST00000266085 NOS1P29475 1434 aa18.82■□□□□ 0.6
TIMP3-201ENST00000266085 RAPGEF6Q8TEU7 1601 aa18.82■□□□□ 0.6
TIMP3-201ENST00000266085 SURF6O75683 361 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms