RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 ROBO2Q9HCK4 1378 aa31.39■■■□□ 2.62
UFD1-201ENST00000263202 AMOTL2Q9Y2J4 779 aa31.39■■■□□ 2.62
UFD1-201ENST00000263202 EVC2Q86UK5 1308 aa31.37■■■□□ 2.61
UFD1-201ENST00000263202 MINK1Q8N4C8 1332 aaPredicted RBP31.37■■■□□ 2.61
UFD1-201ENST00000263202 PTCH1Q13635 1447 aa31.35■■■□□ 2.61
UFD1-201ENST00000263202 MIER1Q8N108 512 aa31.35■■■□□ 2.61
UFD1-201ENST00000263202 STRCQ7RTU9 1775 aa31.33■■■□□ 2.61
UFD1-201ENST00000263202 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.32■■■□□ 2.6
UFD1-201ENST00000263202 PUS7Q96PZ0 661 aaKnown RBP31.31■■■□□ 2.6
UFD1-201ENST00000263202 KCNA6P17658 529 aa31.28■■■□□ 2.6
UFD1-201ENST00000263202 ADGRB2O60241 1585 aa31.27■■■□□ 2.6
UFD1-201ENST00000263202 NWD1Q149M9 1564 aa31.26■■■□□ 2.59
UFD1-201ENST00000263202 CABP2Q9NPB3 220 aa31.25■■■□□ 2.59
UFD1-201ENST00000263202 CDK19Q9BWU1 502 aa31.24■■■□□ 2.59
UFD1-201ENST00000263202 ANP32CO43423 234 aa31.23■■■□□ 2.59
UFD1-201ENST00000263202 SRPK2P78362 688 aaKnown RBP31.23■■■□□ 2.59
UFD1-201ENST00000263202 PANK3Q9H999 370 aa31.23■■■□□ 2.59
UFD1-201ENST00000263202 WASLO00401 505 aaPredicted RBP31.19■■■□□ 2.58
UFD1-201ENST00000263202 PER1O15534 1290 aaPredicted RBP31.19■■■□□ 2.58
UFD1-201ENST00000263202 ATAD2Q6PL18 1390 aa31.19■■■□□ 2.58
UFD1-201ENST00000263202 TMC1Q8TDI8 760 aa31.14■■■□□ 2.58
UFD1-201ENST00000263202 SLC12A5Q9H2X9 1139 aa31.14■■■□□ 2.58
UFD1-201ENST00000263202 STRCP1A6NGW2 1772 aa31.14■■■□□ 2.58
UFD1-201ENST00000263202 NALCNQ8IZF0 1738 aa31.14■■■□□ 2.58
UFD1-201ENST00000263202 NINLQ9Y2I6 1382 aa31.13■■■□□ 2.57
UFD1-201ENST00000263202 NKTRP30414 1462 aaKnown RBP31.11■■■□□ 2.57
UFD1-201ENST00000263202 PRKRIP1Q9H875 184 aaPredicted RBP31.1■■■□□ 2.57
UFD1-201ENST00000263202 ATP7BP35670 1465 aa31.07■■■□□ 2.56
UFD1-201ENST00000263202 ANKRD36BQ8N2N9 1353 aa31.06■■■□□ 2.56
UFD1-201ENST00000263202 CARD14Q9BXL6 1004 aa31.06■■■□□ 2.56
UFD1-201ENST00000263202 TOPAZ1Q8N9V7 1692 aa31.06■■■□□ 2.56
UFD1-201ENST00000263202 NUDT16Q96DE0 195 aaKnown RBP31.05■■■□□ 2.56
UFD1-201ENST00000263202 FMN2Q9NZ56 1722 aa31.05■■■□□ 2.56
UFD1-201ENST00000263202 USP32Q8NFA0 1604 aa31.05■■■□□ 2.56
UFD1-201ENST00000263202 KNSTRNQ9Y448 316 aa31.05■■■□□ 2.56
UFD1-201ENST00000263202 CD163L1Q9NR16 1453 aa31.04■■■□□ 2.56
UFD1-201ENST00000263202 CDC42BPGQ6DT37 1551 aa31.04■■■□□ 2.56
UFD1-201ENST00000263202 PRR36Q9H6K5 1346 aa31.03■■■□□ 2.56
UFD1-201ENST00000263202 ADGRL3Q9HAR2 1447 aa31.03■■■□□ 2.56
UFD1-201ENST00000263202 RBM33Q96EV2 1170 aaKnown RBP31.03■■■□□ 2.56
UFD1-201ENST00000263202 CABP1Q9NZU7 370 aa31.03■■■□□ 2.56
UFD1-201ENST00000263202 RGPD8O14715 1765 aaPredicted RBP31.02■■■□□ 2.56
UFD1-201ENST00000263202 PPIP5K1Q6PFW1 1433 aa31.02■■■□□ 2.56
UFD1-201ENST00000263202 CNGB1Q14028 1251 aaPredicted RBP31.01■■■□□ 2.56
UFD1-201ENST00000263202 PROSER2Q86WR7 435 aaPredicted RBP31.01■■■□□ 2.55
UFD1-201ENST00000263202 CCDC61Q9Y6R9 512 aa31.01■■■□□ 2.55
UFD1-201ENST00000263202 A0A1W2PP64 1363 aa31■■■□□ 2.55
UFD1-201ENST00000263202 ITSN1Q15811 1721 aa31■■■□□ 2.55
UFD1-201ENST00000263202 NSD3Q9BZ95 1437 aa30.99■■■□□ 2.55
UFD1-201ENST00000263202 KTN1Q86UP2 1357 aaKnown RBP30.99■■■□□ 2.55
UFD1-201ENST00000263202 AMER1Q5JTC6 1135 aaPredicted RBP30.99■■■□□ 2.55
UFD1-201ENST00000263202 CCER2I3L3R5 266 aa30.98■■■□□ 2.55
UFD1-201ENST00000263202 TERF2IPQ9NYB0 399 aa30.98■■■□□ 2.55
UFD1-201ENST00000263202 NPC1L1Q9UHC9 1359 aa30.97■■■□□ 2.55
UFD1-201ENST00000263202 DMRT2Q9Y5R5 561 aa30.96■■■□□ 2.55
UFD1-201ENST00000263202 AKAP12Q02952 1782 aa30.96■■■□□ 2.55
UFD1-201ENST00000263202 NUTM2FA1L443 756 aa30.96■■■□□ 2.55
UFD1-201ENST00000263202 CC2D1BQ5T0F9 858 aaKnown RBP30.96■■■□□ 2.55
UFD1-201ENST00000263202 PARD3Q8TEW0 1356 aa30.95■■■□□ 2.55
UFD1-201ENST00000263202 RALBP1Q15311 655 aa30.94■■■□□ 2.54
UFD1-201ENST00000263202 ANKARQ7Z5J8 1434 aa30.94■■■□□ 2.54
UFD1-201ENST00000263202 HDGFL2Q7Z4V5 671 aaPredicted RBP30.94■■■□□ 2.54
UFD1-201ENST00000263202 CPSF1Q10570 1443 aaKnown RBP30.93■■■□□ 2.54
UFD1-201ENST00000263202 XIRP1Q702N8 1843 aaKnown RBP30.93■■■□□ 2.54
UFD1-201ENST00000263202 MON2Q7Z3U7 1717 aa30.92■■■□□ 2.54
UFD1-201ENST00000263202 NCOA3Q9Y6Q9 1424 aa30.92■■■□□ 2.54
UFD1-201ENST00000263202 C14orf37Q86TY3 774 aa30.91■■■□□ 2.54
UFD1-201ENST00000263202 TMEM94Q12767 1356 aa30.91■■■□□ 2.54
UFD1-201ENST00000263202 ZNF335Q9H4Z2 1342 aaPredicted RBP30.9■■■□□ 2.54
UFD1-201ENST00000263202 PLEKHG3A1L390 1219 aa30.89■■■□□ 2.53
UFD1-201ENST00000263202 CGNL1Q0VF96 1302 aa30.86■■■□□ 2.53
UFD1-201ENST00000263202 KIF20BQ96Q89 1820 aa30.85■■■□□ 2.53
UFD1-201ENST00000263202 C19orf44Q9H6X5 657 aa30.85■■■□□ 2.53
UFD1-201ENST00000263202 MYBBP1AQ9BQG0 1328 aaKnown RBP30.85■■■□□ 2.53
UFD1-201ENST00000263202 LRRC7Q96NW7 1537 aa30.85■■■□□ 2.53
UFD1-201ENST00000263202 ANKRD26Q9UPS8 1709 aa30.83■■■□□ 2.53
UFD1-201ENST00000263202 ZNF692Q9BU19 519 aaPredicted RBP30.82■■■□□ 2.52
UFD1-201ENST00000263202 ACEP12821 1306 aa30.82■■■□□ 2.52
UFD1-201ENST00000263202 EDC4Q6P2E9 1401 aaKnown RBP30.82■■■□□ 2.52
UFD1-201ENST00000263202 CCDC184Q52MB2 194 aa30.82■■■□□ 2.52
UFD1-201ENST00000263202 NRKQ7Z2Y5 1582 aa30.81■■■□□ 2.52
UFD1-201ENST00000263202 NSD2O96028 1365 aa30.81■■■□□ 2.52
UFD1-201ENST00000263202 DCCP43146 1447 aa30.8■■■□□ 2.52
UFD1-201ENST00000263202 POLR3AO14802 1390 aaPredicted RBP30.8■■■□□ 2.52
UFD1-201ENST00000263202 PMFBP1Q8TBY8 1022 aa30.79■■■□□ 2.52
UFD1-201ENST00000263202 USP6P35125 1406 aa30.75■■■□□ 2.51
UFD1-201ENST00000263202 FYB1O15117 783 aa30.75■■■□□ 2.51
UFD1-201ENST00000263202 MRS2Q9HD23 443 aa30.75■■■□□ 2.51
UFD1-201ENST00000263202 NLRP13Q86W25 1043 aa30.74■■■□□ 2.51
UFD1-201ENST00000263202 BRD4O60885 1362 aaPredicted RBP30.74■■■□□ 2.51
UFD1-201ENST00000263202 MSH6P52701 1360 aa30.74■■■□□ 2.51
UFD1-201ENST00000263202 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.73■■■□□ 2.51
UFD1-201ENST00000263202 NGDNQ8NEJ9 315 aaKnown RBP30.73■■■□□ 2.51
UFD1-201ENST00000263202 ATF3P18847 181 aa30.73■■■□□ 2.51
UFD1-201ENST00000263202 MORC1Q86VD1 984 aa30.73■■■□□ 2.51
UFD1-201ENST00000263202 C1orf167Q5SNV9 1468 aa30.72■■■□□ 2.51
UFD1-201ENST00000263202 PPP2R1AP30153 589 aa30.72■■■□□ 2.51
UFD1-201ENST00000263202 PHF8Q9UPP1 1060 aa30.72■■■□□ 2.51
UFD1-201ENST00000263202 MST1RQ04912 1400 aa30.72■■■□□ 2.51
UFD1-201ENST00000263202 GGNBP2Q9H3C7 697 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms