RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 WAPLQ7Z5K2 1190 aa17.8■□□□□ 0.44
VAMP7-201ENST00000262640 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
VAMP7-201ENST00000262640 PTPRUQ92729 1446 aa17.78■□□□□ 0.44
VAMP7-201ENST00000262640 RALBP1Q15311 655 aa17.77■□□□□ 0.44
VAMP7-201ENST00000262640 ATAD2Q6PL18 1390 aa17.77■□□□□ 0.44
VAMP7-201ENST00000262640 ROBO2Q9HCK4 1378 aa17.77■□□□□ 0.44
VAMP7-201ENST00000262640 NINLQ9Y2I6 1382 aa17.77■□□□□ 0.44
VAMP7-201ENST00000262640 KDM4FA0A1W2PPD8 638 aa17.77■□□□□ 0.43
VAMP7-201ENST00000262640 SRPK2P78362 688 aaKnown RBP17.77■□□□□ 0.43
VAMP7-201ENST00000262640 CABP2Q9NPB3 220 aa17.77■□□□□ 0.43
VAMP7-201ENST00000262640 KNSTRNQ9Y448 316 aa17.77■□□□□ 0.43
VAMP7-201ENST00000262640 PTCH1Q13635 1447 aa17.75■□□□□ 0.43
VAMP7-201ENST00000262640 AMOTL2Q9Y2J4 779 aa17.75■□□□□ 0.43
VAMP7-201ENST00000262640 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
VAMP7-201ENST00000262640 CDK19Q9BWU1 502 aa17.75■□□□□ 0.43
VAMP7-201ENST00000262640 NPHP4O75161 1426 aaPredicted RBP17.75■□□□□ 0.43
VAMP7-201ENST00000262640 YTHDC1Q96MU7 727 aaKnown RBP17.74■□□□□ 0.43
VAMP7-201ENST00000262640 PARD3Q8TEW0 1356 aa17.74■□□□□ 0.43
VAMP7-201ENST00000262640 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
VAMP7-201ENST00000262640 NPC1L1Q9UHC9 1359 aa17.73■□□□□ 0.43
VAMP7-201ENST00000262640 CNGB1Q14028 1251 aaPredicted RBP17.73■□□□□ 0.43
VAMP7-201ENST00000262640 SLC12A5Q9H2X9 1139 aa17.73■□□□□ 0.43
VAMP7-201ENST00000262640 WASLO00401 505 aaPredicted RBP17.72■□□□□ 0.43
VAMP7-201ENST00000262640 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.43
VAMP7-201ENST00000262640 ADGRB2O60241 1585 aa17.71■□□□□ 0.43
VAMP7-201ENST00000262640 AMER1Q5JTC6 1135 aaPredicted RBP17.71■□□□□ 0.43
VAMP7-201ENST00000262640 ANKRD36BQ8N2N9 1353 aa17.71■□□□□ 0.43
VAMP7-201ENST00000262640 CC2D1BQ5T0F9 858 aaKnown RBP17.7■□□□□ 0.42
VAMP7-201ENST00000262640 CARD14Q9BXL6 1004 aa17.7■□□□□ 0.42
VAMP7-201ENST00000262640 NCKAP5LQ9HCH0 1330 aa17.69■□□□□ 0.42
VAMP7-201ENST00000262640 MRS2Q9HD23 443 aa17.69■□□□□ 0.42
VAMP7-201ENST00000262640 NSD3Q9BZ95 1437 aa17.68■□□□□ 0.42
VAMP7-201ENST00000262640 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.68■□□□□ 0.42
VAMP7-201ENST00000262640 CCDC184Q52MB2 194 aa17.67■□□□□ 0.42
VAMP7-201ENST00000262640 KCNA6P17658 529 aa17.66■□□□□ 0.42
VAMP7-201ENST00000262640 TERF2IPQ9NYB0 399 aa17.66■□□□□ 0.42
VAMP7-201ENST00000262640 CHD2O14647 1828 aaKnown RBP17.66■□□□□ 0.42
VAMP7-201ENST00000262640 BRD4O60885 1362 aaPredicted RBP17.66■□□□□ 0.42
VAMP7-201ENST00000262640 CENPBP07199 599 aaPredicted RBP17.66■□□□□ 0.42
VAMP7-201ENST00000262640 USP32Q8NFA0 1604 aa17.66■□□□□ 0.42
VAMP7-201ENST00000262640 NLRP13Q86W25 1043 aa17.65■□□□□ 0.42
VAMP7-201ENST00000262640 A0A1W2PP64 1363 aa17.64■□□□□ 0.41
VAMP7-201ENST00000262640 ATP7BP35670 1465 aa17.64■□□□□ 0.41
VAMP7-201ENST00000262640 HDGFL2Q7Z4V5 671 aaPredicted RBP17.63■□□□□ 0.41
VAMP7-201ENST00000262640 NUDT16Q96DE0 195 aaKnown RBP17.63■□□□□ 0.41
VAMP7-201ENST00000262640 CABP1Q9NZU7 370 aa17.63■□□□□ 0.41
VAMP7-201ENST00000262640 CD163L1Q9NR16 1453 aa17.63■□□□□ 0.41
VAMP7-201ENST00000262640 CGNL1Q0VF96 1302 aa17.63■□□□□ 0.41
VAMP7-201ENST00000262640 LMTK3Q96Q04 1460 aa17.63■□□□□ 0.41
VAMP7-201ENST00000262640 CCDC61Q9Y6R9 512 aa17.62■□□□□ 0.41
VAMP7-201ENST00000262640 NSD2O96028 1365 aa17.61■□□□□ 0.41
VAMP7-201ENST00000262640 PPIP5K1Q6PFW1 1433 aa17.61■□□□□ 0.41
VAMP7-201ENST00000262640 NWD1Q149M9 1564 aa17.61■□□□□ 0.41
VAMP7-201ENST00000262640 HSPA2P54652 639 aa17.6■□□□□ 0.41
VAMP7-201ENST00000262640 PRR36Q9H6K5 1346 aa17.59■□□□□ 0.41
VAMP7-201ENST00000262640 PPP2R1AP30153 589 aa17.58■□□□□ 0.41
VAMP7-201ENST00000262640 CPSF1Q10570 1443 aaKnown RBP17.58■□□□□ 0.4
VAMP7-201ENST00000262640 CDC42BPGQ6DT37 1551 aa17.57■□□□□ 0.4
VAMP7-201ENST00000262640 FAM9BQ8IZU0 186 aa17.57■□□□□ 0.4
VAMP7-201ENST00000262640 TOPAZ1Q8N9V7 1692 aa17.56■□□□□ 0.4
VAMP7-201ENST00000262640 PNISRQ8TF01 805 aaKnown RBP17.56■□□□□ 0.4
VAMP7-201ENST00000262640 NKTRP30414 1462 aaKnown RBP17.55■□□□□ 0.4
VAMP7-201ENST00000262640 ANKARQ7Z5J8 1434 aa17.55■□□□□ 0.4
VAMP7-201ENST00000262640 MORC1Q86VD1 984 aa17.55■□□□□ 0.4
VAMP7-201ENST00000262640 ADGRL3Q9HAR2 1447 aa17.54■□□□□ 0.4
VAMP7-201ENST00000262640 PLEKHG3A1L390 1219 aa17.54■□□□□ 0.4
VAMP7-201ENST00000262640 EDC4Q6P2E9 1401 aaKnown RBP17.54■□□□□ 0.4
VAMP7-201ENST00000262640 ZNF692Q9BU19 519 aaPredicted RBP17.54■□□□□ 0.4
VAMP7-201ENST00000262640 NALCNQ8IZF0 1738 aa17.53■□□□□ 0.4
VAMP7-201ENST00000262640 FMN2Q9NZ56 1722 aa17.52■□□□□ 0.4
VAMP7-201ENST00000262640 ITSN1Q15811 1721 aa17.52■□□□□ 0.4
VAMP7-201ENST00000262640 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
VAMP7-201ENST00000262640 MON2Q7Z3U7 1717 aa17.51■□□□□ 0.39
VAMP7-201ENST00000262640 AKAP12Q02952 1782 aa17.51■□□□□ 0.39
VAMP7-201ENST00000262640 FYB1O15117 783 aa17.5■□□□□ 0.39
VAMP7-201ENST00000262640 PROSER2Q86WR7 435 aaPredicted RBP17.5■□□□□ 0.39
VAMP7-201ENST00000262640 STRCQ7RTU9 1775 aa17.5■□□□□ 0.39
VAMP7-201ENST00000262640 HNRNPUQ00839 825 aaKnown RBP eCLIP17.49■□□□□ 0.39
VAMP7-201ENST00000262640 ANKRD26Q9UPS8 1709 aa17.49■□□□□ 0.39
VAMP7-201ENST00000262640 ACEP12821 1306 aa17.49■□□□□ 0.39
VAMP7-201ENST00000262640 KIF20BQ96Q89 1820 aa17.49■□□□□ 0.39
VAMP7-201ENST00000262640 GGNBP2Q9H3C7 697 aa17.48■□□□□ 0.39
VAMP7-201ENST00000262640 C14orf37Q86TY3 774 aa17.48■□□□□ 0.39
VAMP7-201ENST00000262640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
VAMP7-201ENST00000262640 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
VAMP7-201ENST00000262640 RBM33Q96EV2 1170 aaKnown RBP17.47■□□□□ 0.39
VAMP7-201ENST00000262640 NCOA3Q9Y6Q9 1424 aa17.46■□□□□ 0.39
VAMP7-201ENST00000262640 INSRP06213 1382 aa17.46■□□□□ 0.39
VAMP7-201ENST00000262640 USP6P35125 1406 aa17.46■□□□□ 0.39
VAMP7-201ENST00000262640 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
VAMP7-201ENST00000262640 NRKQ7Z2Y5 1582 aa17.44■□□□□ 0.38
VAMP7-201ENST00000262640 NGDNQ8NEJ9 315 aaKnown RBP17.44■□□□□ 0.38
VAMP7-201ENST00000262640 STRCP1A6NGW2 1772 aa17.44■□□□□ 0.38
VAMP7-201ENST00000262640 PMFBP1Q8TBY8 1022 aa17.43■□□□□ 0.38
VAMP7-201ENST00000262640 RGPD8O14715 1765 aaPredicted RBP17.43■□□□□ 0.38
VAMP7-201ENST00000262640 TTC21BQ7Z4L5 1316 aa17.43■□□□□ 0.38
VAMP7-201ENST00000262640 TMEM94Q12767 1356 aa17.43■□□□□ 0.38
VAMP7-201ENST00000262640 SSH2Q76I76 1423 aa17.42■□□□□ 0.38
VAMP7-201ENST00000262640 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.38
VAMP7-201ENST00000262640 NME9Q86XW9 330 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms