RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 HDGFP51858 240 aaKnown RBP32.13■■■□□ 2.73
TSPAN13-201ENST00000262067 IRX6P78412 446 aaPredicted RBP32.12■■■□□ 2.73
TSPAN13-201ENST00000262067 NRXN3Q9Y4C0 1643 aa32.12■■■□□ 2.73
TSPAN13-201ENST00000262067 ANKRD36BQ8N2N9 1353 aa32.11■■■□□ 2.73
TSPAN13-201ENST00000262067 SALL2Q9Y467 1007 aaPredicted RBP32.11■■■□□ 2.73
TSPAN13-201ENST00000262067 TMEM2Q9UHN6 1383 aa32.1■■■□□ 2.73
TSPAN13-201ENST00000262067 UBR1Q8IWV7 1749 aa32.1■■■□□ 2.73
TSPAN13-201ENST00000262067 DLC1Q96QB1 1528 aa32.09■■■□□ 2.73
TSPAN13-201ENST00000262067 WDR43Q15061 677 aaKnown RBP eCLIP32.09■■■□□ 2.73
TSPAN13-201ENST00000262067 ABCC11Q96J66 1382 aa32.08■■■□□ 2.73
TSPAN13-201ENST00000262067 WAPLQ7Z5K2 1190 aa32.07■■■□□ 2.72
TSPAN13-201ENST00000262067 METP08581 1390 aa32.07■■■□□ 2.72
TSPAN13-201ENST00000262067 MORC1Q86VD1 984 aa32.06■■■□□ 2.72
TSPAN13-201ENST00000262067 NINLQ9Y2I6 1382 aa32.06■■■□□ 2.72
TSPAN13-201ENST00000262067 CGNL1Q0VF96 1302 aa32.05■■■□□ 2.72
TSPAN13-201ENST00000262067 USP32Q8NFA0 1604 aa32.05■■■□□ 2.72
TSPAN13-201ENST00000262067 ATAD2Q6PL18 1390 aa32.05■■■□□ 2.72
TSPAN13-201ENST00000262067 CDK19Q9BWU1 502 aa32.04■■■□□ 2.72
TSPAN13-201ENST00000262067 NLRP1Q9C000 1473 aa32.04■■■□□ 2.72
TSPAN13-201ENST00000262067 PLEKHH1Q9ULM0 1364 aa32.04■■■□□ 2.72
TSPAN13-201ENST00000262067 C3P01024 1663 aa32.01■■■□□ 2.71
TSPAN13-201ENST00000262067 A0A1W2PP64 1363 aa32■■■□□ 2.71
TSPAN13-201ENST00000262067 PDE3BQ13370 1112 aa32■■■□□ 2.71
TSPAN13-201ENST00000262067 PLPPR3Q6T4P5 718 aa31.99■■■□□ 2.71
TSPAN13-201ENST00000262067 TNNT2P45379 298 aaPredicted RBP31.98■■■□□ 2.71
TSPAN13-201ENST00000262067 FER1L4A9Z1Z3 1794 aa31.98■■■□□ 2.71
TSPAN13-201ENST00000262067 LTKP29376 864 aa31.97■■■□□ 2.71
TSPAN13-201ENST00000262067 TXNDC2Q86VQ3 553 aa31.96■■■□□ 2.71
TSPAN13-201ENST00000262067 POLR3AO14802 1390 aaPredicted RBP31.95■■■□□ 2.71
TSPAN13-201ENST00000262067 ERICH6BQ5W0A0 696 aa31.95■■■□□ 2.71
TSPAN13-201ENST00000262067 NSD2O96028 1365 aa31.95■■■□□ 2.7
TSPAN13-201ENST00000262067 TERF2IPQ9NYB0 399 aa31.95■■■□□ 2.7
TSPAN13-201ENST00000262067 PELP1Q8IZL8 1130 aaKnown RBP31.94■■■□□ 2.7
TSPAN13-201ENST00000262067 CD163L1Q9NR16 1453 aa31.94■■■□□ 2.7
TSPAN13-201ENST00000262067 RNF123Q5XPI4 1314 aa31.93■■■□□ 2.7
TSPAN13-201ENST00000262067 CDCA7LQ96GN5 454 aa31.93■■■□□ 2.7
TSPAN13-201ENST00000262067 ADAMTS13Q76LX8 1427 aa31.92■■■□□ 2.7
TSPAN13-201ENST00000262067 CABP1Q9NZU7 370 aa31.91■■■□□ 2.7
TSPAN13-201ENST00000262067 SIRT1Q96EB6 747 aa31.91■■■□□ 2.7
TSPAN13-201ENST00000262067 PLEKHG1Q9ULL1 1385 aa31.91■■■□□ 2.7
TSPAN13-201ENST00000262067 TECPR2O15040 1411 aa31.9■■■□□ 2.7
TSPAN13-201ENST00000262067 FAM135BQ49AJ0 1406 aa31.88■■■□□ 2.69
TSPAN13-201ENST00000262067 CCDC146Q8IYE0 955 aa31.88■■■□□ 2.69
TSPAN13-201ENST00000262067 HDGFL2Q7Z4V5 671 aaPredicted RBP31.87■■■□□ 2.69
TSPAN13-201ENST00000262067 KNDC1Q76NI1 1749 aa31.87■■■□□ 2.69
TSPAN13-201ENST00000262067 WASLO00401 505 aaPredicted RBP31.86■■■□□ 2.69
TSPAN13-201ENST00000262067 MTHFSP49914 203 aa31.86■■■□□ 2.69
TSPAN13-201ENST00000262067 EID1Q9Y6B2 187 aa31.86■■■□□ 2.69
TSPAN13-201ENST00000262067 CPS1P31327 1500 aa31.84■■■□□ 2.69
TSPAN13-201ENST00000262067 GGNBP2Q9H3C7 697 aa31.84■■■□□ 2.69
TSPAN13-201ENST00000262067 ARHGAP23Q9P227 1491 aa31.83■■■□□ 2.69
TSPAN13-201ENST00000262067 SLIT1O75093 1534 aa31.83■■■□□ 2.69
TSPAN13-201ENST00000262067 FYB1O15117 783 aa31.83■■■□□ 2.69
TSPAN13-201ENST00000262067 PPP4R2Q9NY27 417 aa31.82■■■□□ 2.68
TSPAN13-201ENST00000262067 ROBO2Q9HCK4 1378 aa31.8■■■□□ 2.68
TSPAN13-201ENST00000262067 THEMISQ8N1K5 641 aaPredicted RBP31.8■■■□□ 2.68
TSPAN13-201ENST00000262067 MED14O60244 1454 aa31.8■■■□□ 2.68
TSPAN13-201ENST00000262067 ZNF521Q96K83 1311 aa31.8■■■□□ 2.68
TSPAN13-201ENST00000262067 SLC26A8Q96RN1 970 aa31.8■■■□□ 2.68
TSPAN13-201ENST00000262067 RCAN3Q9UKA8 241 aa31.79■■■□□ 2.68
TSPAN13-201ENST00000262067 APAF1O14727 1248 aa31.79■■■□□ 2.68
TSPAN13-201ENST00000262067 DNAJC5Q9H3Z4 198 aa31.79■■■□□ 2.68
TSPAN13-201ENST00000262067 SHPRHQ149N8 1683 aa31.78■■■□□ 2.68
TSPAN13-201ENST00000262067 CFAP53Q96M91 514 aa31.77■■■□□ 2.68
TSPAN13-201ENST00000262067 ATP7BP35670 1465 aa31.77■■■□□ 2.68
TSPAN13-201ENST00000262067 NUDT16Q96DE0 195 aaKnown RBP31.74■■■□□ 2.67
TSPAN13-201ENST00000262067 PPIP5K1Q6PFW1 1433 aa31.73■■■□□ 2.67
TSPAN13-201ENST00000262067 PTPRUQ92729 1446 aa31.73■■■□□ 2.67
TSPAN13-201ENST00000262067 GOLGA2Q08379 1002 aa31.71■■■□□ 2.67
TSPAN13-201ENST00000262067 TBX22Q9Y458 520 aa31.71■■■□□ 2.67
TSPAN13-201ENST00000262067 ANKRD26Q9UPS8 1709 aa31.71■■■□□ 2.67
TSPAN13-201ENST00000262067 RRP1P56182 461 aaKnown RBP31.7■■■□□ 2.67
TSPAN13-201ENST00000262067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.7■■■□□ 2.67
TSPAN13-201ENST00000262067 NCKAP5LQ9HCH0 1330 aa31.7■■■□□ 2.66
TSPAN13-201ENST00000262067 CPSF1Q10570 1443 aaKnown RBP31.69■■■□□ 2.66
TSPAN13-201ENST00000262067 RIMS1Q86UR5 1692 aaKnown RBP31.69■■■□□ 2.66
TSPAN13-201ENST00000262067 CCDC61Q9Y6R9 512 aa31.69■■■□□ 2.66
TSPAN13-201ENST00000262067 DUSP27Q5VZP5 1158 aa31.68■■■□□ 2.66
TSPAN13-201ENST00000262067 AMOTL2Q9Y2J4 779 aa31.66■■■□□ 2.66
TSPAN13-201ENST00000262067 NGEFQ8N5V2 710 aa31.66■■■□□ 2.66
TSPAN13-201ENST00000262067 PRR36Q9H6K5 1346 aa31.66■■■□□ 2.66
TSPAN13-201ENST00000262067 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.66■■■□□ 2.66
TSPAN13-201ENST00000262067 RUNDC1Q96C34 613 aa31.65■■■□□ 2.66
TSPAN13-201ENST00000262067 KIF20BQ96Q89 1820 aa31.65■■■□□ 2.66
TSPAN13-201ENST00000262067 SLFN5Q08AF3 891 aa31.64■■■□□ 2.66
TSPAN13-201ENST00000262067 B4GALNT3Q6L9W6 998 aa31.64■■■□□ 2.66
TSPAN13-201ENST00000262067 CEP170BQ9Y4F5 1589 aaPredicted RBP31.64■■■□□ 2.65
TSPAN13-201ENST00000262067 EDC4Q6P2E9 1401 aaKnown RBP31.62■■■□□ 2.65
TSPAN13-201ENST00000262067 ADGRB2O60241 1585 aa31.62■■■□□ 2.65
TSPAN13-201ENST00000262067 CDC42BPGQ6DT37 1551 aa31.61■■■□□ 2.65
TSPAN13-201ENST00000262067 TRMT2AQ8IZ69 625 aaKnown RBP31.6■■■□□ 2.65
TSPAN13-201ENST00000262067 U2AF1L5P0DN76 240 aaPredicted RBP31.6■■■□□ 2.65
TSPAN13-201ENST00000262067 U2AF1Q01081 240 aaKnown RBP eCLIP31.6■■■□□ 2.653e-13■■■■□ 19.5
TSPAN13-201ENST00000262067 SPINK5Q9NQ38 1064 aaPredicted RBP31.6■■■□□ 2.65
TSPAN13-201ENST00000262067 TSHZ2Q9NRE2 1034 aa31.6■■■□□ 2.65
TSPAN13-201ENST00000262067 COL3A1P02461 1466 aaPredicted RBP31.59■■■□□ 2.65
TSPAN13-201ENST00000262067 DIP2AQ14689 1571 aa31.58■■■□□ 2.65
TSPAN13-201ENST00000262067 TCP11L2Q8N4U5 519 aa31.58■■■□□ 2.65
TSPAN13-201ENST00000262067 ADAMTSL3P82987 1691 aa31.58■■■□□ 2.65
TSPAN13-201ENST00000262067 DMRT2Q9Y5R5 561 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms