RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ZMYM4Q5VZL5 1548 aa18.72■□□□□ 0.59
SFSWAP-201ENST00000261674 USP35Q9P2H5 1018 aa18.72■□□□□ 0.59
SFSWAP-201ENST00000261674 VWDEQ8N2E2 1590 aa18.71■□□□□ 0.59
SFSWAP-201ENST00000261674 CLTCQ00610 1675 aaKnown RBP18.71■□□□□ 0.59
SFSWAP-201ENST00000261674 VGFO15240 615 aaPredicted RBP18.7■□□□□ 0.58
SFSWAP-201ENST00000261674 TRPM2O94759 1503 aa18.7■□□□□ 0.58
SFSWAP-201ENST00000261674 C8orf34Q49A92 452 aa18.7■□□□□ 0.58
SFSWAP-201ENST00000261674 EIF2AK4Q9P2K8 1649 aaKnown RBP18.7■□□□□ 0.58
SFSWAP-201ENST00000261674 RNF17Q9BXT8 1623 aaKnown RBP18.69■□□□□ 0.58
SFSWAP-201ENST00000261674 CLUAP1Q96AJ1 413 aa18.69■□□□□ 0.58
SFSWAP-201ENST00000261674 ARHGEF40Q8TER5 1519 aa18.69■□□□□ 0.58
SFSWAP-201ENST00000261674 IGHDP01880 384 aa18.68■□□□□ 0.58
SFSWAP-201ENST00000261674 SPHKAPQ2M3C7 1700 aa18.68■□□□□ 0.58
SFSWAP-201ENST00000261674 CARD14Q9BXL6 1004 aa18.68■□□□□ 0.58
SFSWAP-201ENST00000261674 WAPLQ7Z5K2 1190 aa18.67■□□□□ 0.58
SFSWAP-201ENST00000261674 TXNDC2Q86VQ3 553 aa18.67■□□□□ 0.58
SFSWAP-201ENST00000261674 BRPF3Q9ULD4 1205 aa18.67■□□□□ 0.58
SFSWAP-201ENST00000261674 CAMSAP1Q5T5Y3 1602 aa18.66■□□□□ 0.58
SFSWAP-201ENST00000261674 E9PSI1 815 aa18.66■□□□□ 0.58
SFSWAP-201ENST00000261674 MORC1Q86VD1 984 aa18.66■□□□□ 0.58
SFSWAP-201ENST00000261674 MINK1Q8N4C8 1332 aaPredicted RBP18.66■□□□□ 0.58
SFSWAP-201ENST00000261674 ZNF521Q96K83 1311 aa18.66■□□□□ 0.58
SFSWAP-201ENST00000261674 FRAT2O75474 233 aaPredicted RBP18.66■□□□□ 0.58
SFSWAP-201ENST00000261674 LTKP29376 864 aa18.66■□□□□ 0.58
SFSWAP-201ENST00000261674 GSE1Q14687 1217 aa18.66■□□□□ 0.58
SFSWAP-201ENST00000261674 TNRQ92752 1358 aa18.65■□□□□ 0.58
SFSWAP-201ENST00000261674 SLC12A5Q9H2X9 1139 aa18.65■□□□□ 0.58
SFSWAP-201ENST00000261674 CENPJQ9HC77 1338 aaPredicted RBP18.64■□□□□ 0.58
SFSWAP-201ENST00000261674 ANO8Q9HCE9 1232 aaPredicted RBP18.64■□□□□ 0.58
SFSWAP-201ENST00000261674 POGKQ9P215 609 aa18.64■□□□□ 0.58
SFSWAP-201ENST00000261674 SYNMO15061 1565 aa18.64■□□□□ 0.57
SFSWAP-201ENST00000261674 ERVK-7P63135 1459 aa18.64■□□□□ 0.57
SFSWAP-201ENST00000261674 SLKQ9H2G2 1235 aaPredicted RBP18.63■□□□□ 0.57
SFSWAP-201ENST00000261674 SCAF11Q99590 1463 aaKnown RBP18.62■□□□□ 0.57
SFSWAP-201ENST00000261674 EIF3AQ14152 1382 aaKnown RBP18.62■□□□□ 0.57
SFSWAP-201ENST00000261674 HSPA2P54652 639 aa18.62■□□□□ 0.57
SFSWAP-201ENST00000261674 TNNQ9UQP3 1299 aa18.61■□□□□ 0.57
SFSWAP-201ENST00000261674 PLEKHG5O94827 1062 aa18.61■□□□□ 0.57
SFSWAP-201ENST00000261674 WWC1Q8IX03 1113 aa18.61■□□□□ 0.57
SFSWAP-201ENST00000261674 PRAM1Q96QH2 718 aa18.61■□□□□ 0.57
SFSWAP-201ENST00000261674 ARXQ96QS3 562 aa18.61■□□□□ 0.57
SFSWAP-201ENST00000261674 C14orf93Q9H972 538 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-201ENST00000261674 CABP2Q9NPB3 220 aa18.61■□□□□ 0.57
SFSWAP-201ENST00000261674 LMTK2Q8IWU2 1503 aa18.6■□□□□ 0.57
SFSWAP-201ENST00000261674 MROH2AA6NES4 1674 aa18.6■□□□□ 0.57
SFSWAP-201ENST00000261674 SEC24BO95487 1268 aa18.6■□□□□ 0.57
SFSWAP-201ENST00000261674 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
SFSWAP-201ENST00000261674 ASXL1Q8IXJ9 1541 aa18.6■□□□□ 0.57
SFSWAP-201ENST00000261674 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.59■□□□□ 0.57
SFSWAP-201ENST00000261674 SPRYD3Q8NCJ5 442 aa18.59■□□□□ 0.57
SFSWAP-201ENST00000261674 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
SFSWAP-201ENST00000261674 INSRP06213 1382 aa18.58■□□□□ 0.56
SFSWAP-201ENST00000261674 NKTRP30414 1462 aaKnown RBP18.58■□□□□ 0.56
SFSWAP-201ENST00000261674 SRPK2P78362 688 aaKnown RBP18.57■□□□□ 0.56
SFSWAP-201ENST00000261674 TRMT2AQ8IZ69 625 aaKnown RBP18.57■□□□□ 0.56
SFSWAP-201ENST00000261674 MTHFSP49914 203 aa18.56■□□□□ 0.56
SFSWAP-201ENST00000261674 ARHGAP31Q2M1Z3 1444 aa18.56■□□□□ 0.56
SFSWAP-201ENST00000261674 AGLP35573 1532 aa18.56■□□□□ 0.56
SFSWAP-201ENST00000261674 CGNL1Q0VF96 1302 aa18.55■□□□□ 0.56
SFSWAP-201ENST00000261674 RIMS2Q9UQ26 1411 aa18.55■□□□□ 0.56
SFSWAP-201ENST00000261674 U2AF1L5P0DN76 240 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-201ENST00000261674 U2AF1Q01081 240 aaKnown RBP eCLIP18.55■□□□□ 0.565e-8■■■□□ 18.1
SFSWAP-201ENST00000261674 EID1Q9Y6B2 187 aa18.55■□□□□ 0.56
SFSWAP-201ENST00000261674 NCKAP5LQ9HCH0 1330 aa18.54■□□□□ 0.56
SFSWAP-201ENST00000261674 PIK3C2GO75747 1445 aa18.54■□□□□ 0.56
SFSWAP-201ENST00000261674 KIF1BO60333 1816 aa18.54■□□□□ 0.56
SFSWAP-201ENST00000261674 RLBP1P12271 317 aa18.53■□□□□ 0.56
SFSWAP-201ENST00000261674 RPGRIP1LQ68CZ1 1315 aa18.52■□□□□ 0.56
SFSWAP-201ENST00000261674 PREX1Q8TCU6 1659 aa18.52■□□□□ 0.56
SFSWAP-201ENST00000261674 PDE3AQ14432 1141 aa18.52■□□□□ 0.56
SFSWAP-201ENST00000261674 STAC3Q96MF2 364 aa18.52■□□□□ 0.56
SFSWAP-201ENST00000261674 U2SURPO15042 1029 aaKnown RBP18.52■□□□□ 0.55
SFSWAP-201ENST00000261674 MYO5BQ9ULV0 1848 aa18.51■□□□□ 0.55
SFSWAP-201ENST00000261674 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
SFSWAP-201ENST00000261674 PCDHB15Q9Y5E8 787 aa18.51■□□□□ 0.55
SFSWAP-201ENST00000261674 A2ML1A8K2U0 1454 aa18.51■□□□□ 0.55
SFSWAP-201ENST00000261674 RARSP54136 660 aaKnown RBP18.5■□□□□ 0.55
SFSWAP-201ENST00000261674 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
SFSWAP-201ENST00000261674 PIK3C2BO00750 1634 aa18.5■□□□□ 0.55
SFSWAP-201ENST00000261674 ADGRB3O60242 1522 aa18.5■□□□□ 0.55
SFSWAP-201ENST00000261674 METP08581 1390 aa18.49■□□□□ 0.55
SFSWAP-201ENST00000261674 THEMISQ8N1K5 641 aaPredicted RBP18.49■□□□□ 0.55
SFSWAP-201ENST00000261674 NSD3Q9BZ95 1437 aa18.49■□□□□ 0.55
SFSWAP-201ENST00000261674 CFAP53Q96M91 514 aa18.49■□□□□ 0.55
SFSWAP-201ENST00000261674 FTSJ3Q8IY81 847 aaKnown RBP18.49■□□□□ 0.55
SFSWAP-201ENST00000261674 SLC24A1O60721 1099 aa18.48■□□□□ 0.55
SFSWAP-201ENST00000261674 BECN1Q14457 450 aa18.48■□□□□ 0.55
SFSWAP-201ENST00000261674 TSR2Q969E8 191 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-201ENST00000261674 LAMC1P11047 1609 aa18.48■□□□□ 0.55
SFSWAP-201ENST00000261674 PDZRN3Q9UPQ7 1066 aa18.47■□□□□ 0.55
SFSWAP-201ENST00000261674 MADDQ8WXG6 1647 aa18.47■□□□□ 0.55
SFSWAP-201ENST00000261674 MAPK8IP3Q9UPT6 1336 aa18.46■□□□□ 0.55
SFSWAP-201ENST00000261674 TMEM2Q9UHN6 1383 aa18.45■□□□□ 0.54
SFSWAP-201ENST00000261674 EIF5BO60841 1220 aaKnown RBP18.45■□□□□ 0.54
SFSWAP-201ENST00000261674 HDGFP51858 240 aaKnown RBP18.45■□□□□ 0.54
SFSWAP-201ENST00000261674 NPC1L1Q9UHC9 1359 aa18.45■□□□□ 0.54
SFSWAP-201ENST00000261674 PMFBP1Q8TBY8 1022 aa18.45■□□□□ 0.54
SFSWAP-201ENST00000261674 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
SFSWAP-201ENST00000261674 KDM4FA0A1W2PPD8 638 aa18.44■□□□□ 0.54
SFSWAP-201ENST00000261674 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms