RNA–Protein interactions for RNA: ENST00000261597.8

NDC80-201, Transcript of NDC80, kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC80, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-201ENST00000261597 POLR3GLQ9BT43 218 aa9.29□□□□□ -0.92
NDC80-201ENST00000261597 CENPJQ9HC77 1338 aaPredicted RBP9.29□□□□□ -0.92
NDC80-201ENST00000261597 SBNO2Q9Y2G9 1366 aa9.29□□□□□ -0.92
NDC80-201ENST00000261597 ANP32CO43423 234 aa9.29□□□□□ -0.92
NDC80-201ENST00000261597 LTKP29376 864 aa9.29□□□□□ -0.92
NDC80-201ENST00000261597 DISP3Q9P2K9 1392 aa9.28□□□□□ -0.92
NDC80-201ENST00000261597 PLEKHG1Q9ULL1 1385 aa9.28□□□□□ -0.92
NDC80-201ENST00000261597 PTPRMP28827 1452 aa9.28□□□□□ -0.92
NDC80-201ENST00000261597 ASXL1Q8IXJ9 1541 aa9.28□□□□□ -0.92
NDC80-201ENST00000261597 CEP170BQ9Y4F5 1589 aaPredicted RBP9.28□□□□□ -0.92
NDC80-201ENST00000261597 YTHDC2Q9H6S0 1430 aaKnown RBP9.27□□□□□ -0.92
NDC80-201ENST00000261597 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
NDC80-201ENST00000261597 NRXN3Q9Y4C0 1643 aa9.27□□□□□ -0.93
NDC80-201ENST00000261597 SETD1AO15047 1707 aaKnown RBP9.26□□□□□ -0.93
NDC80-201ENST00000261597 STK26Q9P289 416 aa9.26□□□□□ -0.93
NDC80-201ENST00000261597 ARHGEF28Q8N1W1 1705 aaKnown RBP9.26□□□□□ -0.93
NDC80-201ENST00000261597 ZNF142P52746 1687 aaPredicted RBP9.26□□□□□ -0.93
NDC80-201ENST00000261597 LRPPRCP42704 1394 aaKnown RBP9.26□□□□□ -0.93
NDC80-201ENST00000261597 ABCC11Q96J66 1382 aa9.26□□□□□ -0.93
NDC80-201ENST00000261597 ECM2O94769 699 aaPredicted RBP9.25□□□□□ -0.93
NDC80-201ENST00000261597 SIRT1Q96EB6 747 aa9.25□□□□□ -0.93
NDC80-201ENST00000261597 PUS7Q96PZ0 661 aaKnown RBP9.25□□□□□ -0.93
NDC80-201ENST00000261597 DLC1Q96QB1 1528 aa9.25□□□□□ -0.93
NDC80-201ENST00000261597 QRICH2Q9H0J4 1663 aa9.25□□□□□ -0.93
NDC80-201ENST00000261597 ADAMTS13Q76LX8 1427 aa9.24□□□□□ -0.93
NDC80-201ENST00000261597 METP08581 1390 aa9.24□□□□□ -0.93
NDC80-201ENST00000261597 ANKLE2Q86XL3 938 aa9.24□□□□□ -0.93
NDC80-201ENST00000261597 POGKQ9P215 609 aa9.24□□□□□ -0.93
NDC80-201ENST00000261597 TBX22Q9Y458 520 aa9.24□□□□□ -0.93
NDC80-201ENST00000261597 MED14O60244 1454 aa9.24□□□□□ -0.93
NDC80-201ENST00000261597 CCER2I3L3R5 266 aa9.23□□□□□ -0.93
NDC80-201ENST00000261597 EVC2Q86UK5 1308 aa9.23□□□□□ -0.93
NDC80-201ENST00000261597 PRAM1Q96QH2 718 aa9.23□□□□□ -0.93
NDC80-201ENST00000261597 TECPR2O15040 1411 aa9.22□□□□□ -0.93
NDC80-201ENST00000261597 DIP2AQ14689 1571 aa9.22□□□□□ -0.93
NDC80-201ENST00000261597 PER1O15534 1290 aaPredicted RBP9.22□□□□□ -0.93
NDC80-201ENST00000261597 SPRYD3Q8NCJ5 442 aa9.22□□□□□ -0.93
NDC80-201ENST00000261597 SPOCK2Q92563 424 aa9.22□□□□□ -0.93
NDC80-201ENST00000261597 PRKRIP1Q9H875 184 aaPredicted RBP9.22□□□□□ -0.93
NDC80-201ENST00000261597 PANK3Q9H999 370 aa9.22□□□□□ -0.93
NDC80-201ENST00000261597 FAM135BQ49AJ0 1406 aa9.21□□□□□ -0.94
NDC80-201ENST00000261597 KNDC1Q76NI1 1749 aa9.21□□□□□ -0.94
NDC80-201ENST00000261597 SAFB2Q14151 953 aaKnown RBP eCLIP9.2□□□□□ -0.94
NDC80-201ENST00000261597 SLC26A8Q96RN1 970 aa9.2□□□□□ -0.94
NDC80-201ENST00000261597 KDM4FA0A1W2PPD8 638 aa9.2□□□□□ -0.94
NDC80-201ENST00000261597 TULP1O00294 542 aaPredicted RBP9.2□□□□□ -0.94
NDC80-201ENST00000261597 KTN1Q86UP2 1357 aaKnown RBP9.19□□□□□ -0.94
NDC80-201ENST00000261597 PIK3R4Q99570 1358 aa9.19□□□□□ -0.94
NDC80-201ENST00000261597 WAPLQ7Z5K2 1190 aa9.19□□□□□ -0.94
NDC80-201ENST00000261597 CPS1P31327 1500 aa9.19□□□□□ -0.94
NDC80-201ENST00000261597 TULP4Q9NRJ4 1543 aa9.19□□□□□ -0.94
NDC80-201ENST00000261597 MINK1Q8N4C8 1332 aaPredicted RBP9.19□□□□□ -0.94
NDC80-201ENST00000261597 RGL2O15211 777 aa9.19□□□□□ -0.94
NDC80-201ENST00000261597 MYOM1P52179 1685 aa9.18□□□□□ -0.94
NDC80-201ENST00000261597 AMOTL2Q9Y2J4 779 aa9.18□□□□□ -0.94
NDC80-201ENST00000261597 PTPRUQ92729 1446 aa9.18□□□□□ -0.94
NDC80-201ENST00000261597 PLEKHH1Q9ULM0 1364 aa9.18□□□□□ -0.94
NDC80-201ENST00000261597 RALBP1Q15311 655 aa9.17□□□□□ -0.94
NDC80-201ENST00000261597 KNSTRNQ9Y448 316 aa9.17□□□□□ -0.94
NDC80-201ENST00000261597 SRPK2P78362 688 aaKnown RBP9.17□□□□□ -0.94
NDC80-201ENST00000261597 CDK19Q9BWU1 502 aa9.17□□□□□ -0.94
NDC80-201ENST00000261597 CABP2Q9NPB3 220 aa9.17□□□□□ -0.94
NDC80-201ENST00000261597 ATAD2Q6PL18 1390 aa9.16□□□□□ -0.94
NDC80-201ENST00000261597 ROBO2Q9HCK4 1378 aa9.16□□□□□ -0.94
NDC80-201ENST00000261597 NINLQ9Y2I6 1382 aa9.16□□□□□ -0.94
NDC80-201ENST00000261597 NPHP4O75161 1426 aaPredicted RBP9.16□□□□□ -0.94
NDC80-201ENST00000261597 WASLO00401 505 aaPredicted RBP9.16□□□□□ -0.94
NDC80-201ENST00000261597 TMC1Q8TDI8 760 aa9.16□□□□□ -0.94
NDC80-201ENST00000261597 SLC12A5Q9H2X9 1139 aa9.15□□□□□ -0.94
NDC80-201ENST00000261597 NPC1L1Q9UHC9 1359 aa9.15□□□□□ -0.94
NDC80-201ENST00000261597 PTCH1Q13635 1447 aa9.15□□□□□ -0.95
NDC80-201ENST00000261597 KLHL34Q8N239 644 aa9.14□□□□□ -0.95
NDC80-201ENST00000261597 NCKAP5LQ9HCH0 1330 aa9.14□□□□□ -0.95
NDC80-201ENST00000261597 XRN1Q8IZH2 1706 aaKnown RBP9.14□□□□□ -0.95
NDC80-201ENST00000261597 CARD14Q9BXL6 1004 aa9.14□□□□□ -0.95
NDC80-201ENST00000261597 GTF3C3Q9Y5Q9 886 aa9.14□□□□□ -0.95
NDC80-201ENST00000261597 PARD3Q8TEW0 1356 aa9.14□□□□□ -0.95
NDC80-201ENST00000261597 CHD2O14647 1828 aaKnown RBP9.14□□□□□ -0.95
NDC80-201ENST00000261597 ANKRD36BQ8N2N9 1353 aa9.13□□□□□ -0.95
NDC80-201ENST00000261597 TERF2IPQ9NYB0 399 aa9.13□□□□□ -0.95
NDC80-201ENST00000261597 MYBBP1AQ9BQG0 1328 aaKnown RBP9.13□□□□□ -0.95
NDC80-201ENST00000261597 ADGRB2O60241 1585 aa9.13□□□□□ -0.95
NDC80-201ENST00000261597 KCNA6P17658 529 aa9.12□□□□□ -0.95
NDC80-201ENST00000261597 CNGB1Q14028 1251 aaPredicted RBP9.12□□□□□ -0.95
NDC80-201ENST00000261597 CC2D1BQ5T0F9 858 aaKnown RBP9.12□□□□□ -0.95
NDC80-201ENST00000261597 ARXQ96QS3 562 aa9.12□□□□□ -0.95
NDC80-201ENST00000261597 DAXXQ9UER7 740 aaPredicted RBP9.12□□□□□ -0.95
NDC80-201ENST00000261597 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.12□□□□□ -0.95
NDC80-201ENST00000261597 MRS2Q9HD23 443 aa9.12□□□□□ -0.95
NDC80-201ENST00000261597 NUDT16Q96DE0 195 aaKnown RBP9.11□□□□□ -0.95
NDC80-201ENST00000261597 YTHDC1Q96MU7 727 aaKnown RBP9.11□□□□□ -0.95
NDC80-201ENST00000261597 CABP1Q9NZU7 370 aa9.11□□□□□ -0.95
NDC80-201ENST00000261597 BRD4O60885 1362 aaPredicted RBP9.1□□□□□ -0.95
NDC80-201ENST00000261597 NBR1Q14596 966 aa9.1□□□□□ -0.95
NDC80-201ENST00000261597 CCDC184Q52MB2 194 aa9.1□□□□□ -0.95
NDC80-201ENST00000261597 HDGFL2Q7Z4V5 671 aaPredicted RBP9.1□□□□□ -0.95
NDC80-201ENST00000261597 CCDC61Q9Y6R9 512 aa9.1□□□□□ -0.95
NDC80-201ENST00000261597 NLRP13Q86W25 1043 aa9.1□□□□□ -0.95
NDC80-201ENST00000261597 LMTK3Q96Q04 1460 aa9.1□□□□□ -0.95
NDC80-201ENST00000261597 NSD3Q9BZ95 1437 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms