RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 LRP6O75581 1613 aa13.64□□□□□ -0.23
LIN7A-201ENST00000261203 ABCC11Q96J66 1382 aa13.63□□□□□ -0.23
LIN7A-201ENST00000261203 PPP4R3CPQ6ZMV5 832 aa13.63□□□□□ -0.23
LIN7A-201ENST00000261203 MEX3CQ5U5Q3 659 aaKnown RBP13.62□□□□□ -0.23
LIN7A-201ENST00000261203 ZNF772Q68DY9 489 aaPredicted RBP13.61□□□□□ -0.23
LIN7A-201ENST00000261203 C14orf93Q9H972 538 aaKnown RBP13.61□□□□□ -0.23
LIN7A-201ENST00000261203 STK26Q9P289 416 aa13.61□□□□□ -0.23
LIN7A-201ENST00000261203 YTHDC2Q9H6S0 1430 aaKnown RBP13.61□□□□□ -0.23
LIN7A-201ENST00000261203 TMEM132EQ6IEE7 984 aa13.59□□□□□ -0.23
LIN7A-201ENST00000261203 SIRT1Q96EB6 747 aa13.59□□□□□ -0.23
LIN7A-201ENST00000261203 FMN2Q9NZ56 1722 aa13.59□□□□□ -0.23
LIN7A-201ENST00000261203 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.23
LIN7A-201ENST00000261203 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.23
LIN7A-201ENST00000261203 WAPLQ7Z5K2 1190 aa13.58□□□□□ -0.24
LIN7A-201ENST00000261203 DDX17Q92841 729 aaKnown RBP13.58□□□□□ -0.24
LIN7A-201ENST00000261203 ORAI2Q96SN7 254 aa13.58□□□□□ -0.24
LIN7A-201ENST00000261203 SOS2Q07890 1332 aaPredicted RBP13.58□□□□□ -0.24
LIN7A-201ENST00000261203 SRCAPQ6ZRS2 3230 aa13.57□□□□□ -0.24
LIN7A-201ENST00000261203 NUTM2BA6NNL0 878 aaPredicted RBP13.57□□□□□ -0.24
LIN7A-201ENST00000261203 NUTM2EB1AL46 878 aaPredicted RBP13.57□□□□□ -0.24
LIN7A-201ENST00000261203 NUTM2AQ8IVF1 878 aaPredicted RBP13.57□□□□□ -0.24
LIN7A-201ENST00000261203 STAC3Q96MF2 364 aa13.57□□□□□ -0.24
LIN7A-201ENST00000261203 RXRBP28702 533 aa13.56□□□□□ -0.24
LIN7A-201ENST00000261203 ESCO1Q5FWF5 840 aa13.56□□□□□ -0.24
LIN7A-201ENST00000261203 CFAP70Q5T0N1 1121 aa13.56□□□□□ -0.24
LIN7A-201ENST00000261203 NPHP3Q7Z494 1330 aa13.56□□□□□ -0.24
LIN7A-201ENST00000261203 KIF1AQ12756 1690 aa13.56□□□□□ -0.24
LIN7A-201ENST00000261203 PLEKHH1Q9ULM0 1364 aa13.56□□□□□ -0.24
LIN7A-201ENST00000261203 DLC1Q96QB1 1528 aa13.55□□□□□ -0.24
LIN7A-201ENST00000261203 COL22A1Q8NFW1 1626 aaPredicted RBP13.55□□□□□ -0.24
LIN7A-201ENST00000261203 ADGRB1O14514 1584 aa13.54□□□□□ -0.24
LIN7A-201ENST00000261203 PXDNQ92626 1479 aa13.53□□□□□ -0.24
LIN7A-201ENST00000261203 RGPD8O14715 1765 aaPredicted RBP13.53□□□□□ -0.24
LIN7A-201ENST00000261203 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.25
LIN7A-201ENST00000261203 AFF2P51816 1311 aa13.52□□□□□ -0.25
LIN7A-201ENST00000261203 CDK12Q9NYV4 1490 aaPredicted RBP13.52□□□□□ -0.25
LIN7A-201ENST00000261203 ADGRB2O60241 1585 aa13.51□□□□□ -0.25
LIN7A-201ENST00000261203 KCNA4P22459 653 aa13.51□□□□□ -0.25
LIN7A-201ENST00000261203 PRAM1Q96QH2 718 aa13.51□□□□□ -0.25
LIN7A-201ENST00000261203 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
LIN7A-201ENST00000261203 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
LIN7A-201ENST00000261203 FOXO3O43524 673 aa13.5□□□□□ -0.25
LIN7A-201ENST00000261203 C8orf37Q96NL8 207 aa13.5□□□□□ -0.25
LIN7A-201ENST00000261203 POGKQ9P215 609 aa13.5□□□□□ -0.25
LIN7A-201ENST00000261203 KDM2AQ9Y2K7 1162 aa13.5□□□□□ -0.25
LIN7A-201ENST00000261203 KIAA1210Q9ULL0 1709 aa13.48□□□□□ -0.25
LIN7A-201ENST00000261203 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
LIN7A-201ENST00000261203 NGLY1Q96IV0 654 aa13.48□□□□□ -0.25
LIN7A-201ENST00000261203 ANKARQ7Z5J8 1434 aa13.47□□□□□ -0.25
LIN7A-201ENST00000261203 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
LIN7A-201ENST00000261203 QTRT2Q9H974 415 aaKnown RBP13.47□□□□□ -0.25
LIN7A-201ENST00000261203 TRAK1Q9UPV9 953 aa13.47□□□□□ -0.25
LIN7A-201ENST00000261203 ARHGEF28Q8N1W1 1705 aaKnown RBP13.47□□□□□ -0.25
LIN7A-201ENST00000261203 EIF3AQ14152 1382 aaKnown RBP13.46□□□□□ -0.25
LIN7A-201ENST00000261203 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
LIN7A-201ENST00000261203 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.25
LIN7A-201ENST00000261203 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
LIN7A-201ENST00000261203 USP32Q8NFA0 1604 aa13.46□□□□□ -0.26
LIN7A-201ENST00000261203 SPATA31A3Q5VYP0 1347 aa13.44□□□□□ -0.26
LIN7A-201ENST00000261203 PSME1Q06323 249 aa13.44□□□□□ -0.26
LIN7A-201ENST00000261203 KRT28Q7Z3Y7 464 aa13.44□□□□□ -0.26
LIN7A-201ENST00000261203 ITSN1Q15811 1721 aa13.43□□□□□ -0.26
LIN7A-201ENST00000261203 TNS3Q68CZ2 1445 aa13.43□□□□□ -0.26
LIN7A-201ENST00000261203 FNBP4Q8N3X1 1017 aaPredicted RBP13.43□□□□□ -0.26
LIN7A-201ENST00000261203 USP21Q9UK80 565 aa13.43□□□□□ -0.26
LIN7A-201ENST00000261203 TULP4Q9NRJ4 1543 aa13.43□□□□□ -0.26
LIN7A-201ENST00000261203 TRPC5Q9UL62 973 aaPredicted RBP13.42□□□□□ -0.26
LIN7A-201ENST00000261203 SBNO1A3KN83 1393 aa13.42□□□□□ -0.26
LIN7A-201ENST00000261203 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
LIN7A-201ENST00000261203 MINK1Q8N4C8 1332 aaPredicted RBP13.41□□□□□ -0.26
LIN7A-201ENST00000261203 HIRIP3Q9BW71 556 aaPredicted RBP13.41□□□□□ -0.26
LIN7A-201ENST00000261203 ARHGEF10O15013 1369 aa13.41□□□□□ -0.26
LIN7A-201ENST00000261203 RGS12O14924 1447 aa13.4□□□□□ -0.26
LIN7A-201ENST00000261203 ATRNO75882 1429 aa13.4□□□□□ -0.26
LIN7A-201ENST00000261203 ABCA3Q99758 1704 aa13.4□□□□□ -0.26
LIN7A-201ENST00000261203 TRPM3Q9HCF6 1732 aaPredicted RBP13.4□□□□□ -0.26
LIN7A-201ENST00000261203 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
LIN7A-201ENST00000261203 BCL9LQ86UU0 1499 aa13.38□□□□□ -0.27
LIN7A-201ENST00000261203 GPRASP1Q5JY77 1395 aa13.38□□□□□ -0.27
LIN7A-201ENST00000261203 PMFBP1Q8TBY8 1022 aa13.38□□□□□ -0.27
LIN7A-201ENST00000261203 PRR36Q9H6K5 1346 aa13.38□□□□□ -0.27
LIN7A-201ENST00000261203 ALS2Q96Q42 1657 aa13.37□□□□□ -0.27
LIN7A-201ENST00000261203 NWD2Q9ULI1 1742 aa13.37□□□□□ -0.27
LIN7A-201ENST00000261203 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
LIN7A-201ENST00000261203 ATP7BP35670 1465 aa13.36□□□□□ -0.27
LIN7A-201ENST00000261203 SLIT2O94813 1529 aa13.36□□□□□ -0.27
LIN7A-201ENST00000261203 LMOD2Q6P5Q4 547 aa13.36□□□□□ -0.27
LIN7A-201ENST00000261203 PLCH1Q4KWH8 1693 aa13.36□□□□□ -0.27
LIN7A-201ENST00000261203 TOPAZ1Q8N9V7 1692 aa13.35□□□□□ -0.27
LIN7A-201ENST00000261203 UNC5CLQ8IV45 518 aa13.34□□□□□ -0.27
LIN7A-201ENST00000261203 NGDNQ8NEJ9 315 aaKnown RBP13.34□□□□□ -0.27
LIN7A-201ENST00000261203 ATAD2Q6PL18 1390 aa13.33□□□□□ -0.27
LIN7A-201ENST00000261203 TRPM1Q7Z4N2 1603 aa13.33□□□□□ -0.28
LIN7A-201ENST00000261203 NBPF1Q3BBV0 1214 aa13.33□□□□□ -0.28
LIN7A-201ENST00000261203 CABLES1Q8TDN4 633 aa13.33□□□□□ -0.28
LIN7A-201ENST00000261203 NUDT16Q96DE0 195 aaKnown RBP13.33□□□□□ -0.28
LIN7A-201ENST00000261203 GJD4Q96KN9 370 aaPredicted RBP13.33□□□□□ -0.28
LIN7A-201ENST00000261203 QRICH2Q9H0J4 1663 aa13.33□□□□□ -0.28
LIN7A-201ENST00000261203 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
LIN7A-201ENST00000261203 CCDC125Q86Z20 511 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms