RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CCDC27Q2M243 656 aa11.81□□□□□ -0.52
CTDSPL2-201ENST00000260327 NGDNQ8NEJ9 315 aaKnown RBP11.81□□□□□ -0.52
CTDSPL2-201ENST00000260327 CASKIN1Q8WXD9 1431 aa11.81□□□□□ -0.52
CTDSPL2-201ENST00000260327 CBX1P83916 185 aa11.8□□□□□ -0.52
CTDSPL2-201ENST00000260327 TCP11L2Q8N4U5 519 aa11.8□□□□□ -0.52
CTDSPL2-201ENST00000260327 NGEFQ8N5V2 710 aa11.8□□□□□ -0.52
CTDSPL2-201ENST00000260327 TRIM5Q9C035 493 aa11.8□□□□□ -0.52
CTDSPL2-201ENST00000260327 ZHX1Q9UKY1 873 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL2-201ENST00000260327 MIA2Q96PC5 1412 aa11.8□□□□□ -0.52
CTDSPL2-201ENST00000260327 H0YHG0 523 aa11.8□□□□□ -0.52
CTDSPL2-201ENST00000260327 INTS3Q68E01 1043 aaKnown RBP11.8□□□□□ -0.52
CTDSPL2-201ENST00000260327 ANKRD50Q9ULJ7 1429 aa11.8□□□□□ -0.52
CTDSPL2-201ENST00000260327 CSB-PGBD3P0DP91 1061 aa11.79□□□□□ -0.52
CTDSPL2-201ENST00000260327 COG3Q96JB2 828 aa11.79□□□□□ -0.52
CTDSPL2-201ENST00000260327 C11orf95C9JLR9 678 aaPredicted RBP11.79□□□□□ -0.52
CTDSPL2-201ENST00000260327 MTHFSP49914 203 aa11.79□□□□□ -0.52
CTDSPL2-201ENST00000260327 GGNBP2Q9H3C7 697 aa11.79□□□□□ -0.52
CTDSPL2-201ENST00000260327 PRDM2Q13029 1718 aa11.79□□□□□ -0.52
CTDSPL2-201ENST00000260327 API5Q9BZZ5 524 aaKnown RBP11.78□□□□□ -0.52
CTDSPL2-201ENST00000260327 C1orf115Q9H7X2 142 aa11.78□□□□□ -0.52
CTDSPL2-201ENST00000260327 EIF2S2P20042 333 aaKnown RBP11.78□□□□□ -0.52
CTDSPL2-201ENST00000260327 MCM4P33991 863 aa11.78□□□□□ -0.52
CTDSPL2-201ENST00000260327 FYCO1Q9BQS8 1478 aa11.78□□□□□ -0.52
CTDSPL2-201ENST00000260327 RUFY1Q96T51 708 aa11.78□□□□□ -0.52
CTDSPL2-201ENST00000260327 PCMTD1Q96MG8 357 aaPredicted RBP11.77□□□□□ -0.52
CTDSPL2-201ENST00000260327 TTLL5Q6EMB2 1281 aa11.77□□□□□ -0.52
CTDSPL2-201ENST00000260327 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.52
CTDSPL2-201ENST00000260327 ERICH3Q5RHP9 1530 aa11.77□□□□□ -0.52
CTDSPL2-201ENST00000260327 CDC45O75419 566 aa11.77□□□□□ -0.53
CTDSPL2-201ENST00000260327 PDILTQ8N807 584 aa11.77□□□□□ -0.53
CTDSPL2-201ENST00000260327 AK7Q96M32 723 aa11.77□□□□□ -0.53
CTDSPL2-201ENST00000260327 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
CTDSPL2-201ENST00000260327 HDAC5Q9UQL6 1122 aa11.76□□□□□ -0.53
CTDSPL2-201ENST00000260327 VGFO15240 615 aaPredicted RBP11.76□□□□□ -0.53
CTDSPL2-201ENST00000260327 TMEM132EQ6IEE7 984 aa11.76□□□□□ -0.53
CTDSPL2-201ENST00000260327 TSR2Q969E8 191 aaKnown RBP11.76□□□□□ -0.53
CTDSPL2-201ENST00000260327 ACBD3Q9H3P7 528 aa11.76□□□□□ -0.53
CTDSPL2-201ENST00000260327 EXOSC9Q06265 439 aaKnown RBP11.76□□□□□ -0.53
CTDSPL2-201ENST00000260327 ZKSCAN1P17029 563 aaPredicted RBP11.76□□□□□ -0.53
CTDSPL2-201ENST00000260327 LEKR1Q6ZMV7 388 aa11.76□□□□□ -0.53
CTDSPL2-201ENST00000260327 RDXP35241 583 aaKnown RBP11.76□□□□□ -0.53
CTDSPL2-201ENST00000260327 HSP90AB3PQ58FF7 597 aa11.75□□□□□ -0.53
CTDSPL2-201ENST00000260327 CHMP4AQ9BY43 222 aa11.75□□□□□ -0.53
CTDSPL2-201ENST00000260327 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
CTDSPL2-201ENST00000260327 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.75□□□□□ -0.53
CTDSPL2-201ENST00000260327 C20orf194Q5TEA3 1177 aa11.75□□□□□ -0.53
CTDSPL2-201ENST00000260327 FKBP5Q13451 457 aaPredicted RBP11.75□□□□□ -0.53
CTDSPL2-201ENST00000260327 PDE3AQ14432 1141 aa11.75□□□□□ -0.53
CTDSPL2-201ENST00000260327 DHX37Q8IY37 1157 aaKnown RBP11.75□□□□□ -0.53
CTDSPL2-201ENST00000260327 CEP89Q96ST8 783 aa11.75□□□□□ -0.53
CTDSPL2-201ENST00000260327 MBD3O95983 291 aa11.75□□□□□ -0.53
CTDSPL2-201ENST00000260327 IPO7O95373 1038 aaKnown RBP11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 AAMPQ13685 434 aa11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 ZSCAN30Q86W11 494 aa11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 PDCL2Q8N4E4 241 aa11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 TRERF1Q96PN7 1200 aa11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 FIBPO43427 364 aa11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 CCDC112Q8NEF3 446 aa11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 NOB1Q9ULX3 412 aaKnown RBP11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 HFM1A2PYH4 1435 aa11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 XPCQ01831 940 aaPredicted RBP11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 PRM3Q9NNZ6 103 aa11.74□□□□□ -0.53
CTDSPL2-201ENST00000260327 TIAM1Q13009 1591 aa11.73□□□□□ -0.53
CTDSPL2-201ENST00000260327 CFAP70Q5T0N1 1121 aa11.73□□□□□ -0.53
CTDSPL2-201ENST00000260327 SMC2O95347 1197 aa11.73□□□□□ -0.53
CTDSPL2-201ENST00000260327 CGNQ9P2M7 1197 aaKnown RBP11.73□□□□□ -0.53
CTDSPL2-201ENST00000260327 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
CTDSPL2-201ENST00000260327 C9orf78Q9NZ63 289 aaPredicted RBP11.73□□□□□ -0.53
CTDSPL2-201ENST00000260327 PTPRGP23470 1445 aa11.73□□□□□ -0.53
CTDSPL2-201ENST00000260327 GNAI1P63096 354 aa11.73□□□□□ -0.53
CTDSPL2-201ENST00000260327 RUFY2Q8WXA3 655 aa11.73□□□□□ -0.53
CTDSPL2-201ENST00000260327 PDCL3Q9H2J4 239 aa11.73□□□□□ -0.53
CTDSPL2-201ENST00000260327 NEK4P51957 841 aa11.72□□□□□ -0.53
CTDSPL2-201ENST00000260327 PLCD4Q9BRC7 762 aa11.72□□□□□ -0.53
CTDSPL2-201ENST00000260327 IFIT2P09913 472 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-201ENST00000260327 TSPYL1Q9H0U9 437 aa11.72□□□□□ -0.53
CTDSPL2-201ENST00000260327 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
CTDSPL2-201ENST00000260327 ROCK1Q13464 1354 aa11.71□□□□□ -0.54
CTDSPL2-201ENST00000260327 LETM1O95202 739 aaPredicted RBP11.7□□□□□ -0.54
CTDSPL2-201ENST00000260327 NAP1L1P55209 391 aaKnown RBP11.7□□□□□ -0.54
CTDSPL2-201ENST00000260327 RRP12Q5JTH9 1297 aaKnown RBP11.7□□□□□ -0.54
CTDSPL2-201ENST00000260327 AXDND1Q5T1B0 1012 aaPredicted RBP11.7□□□□□ -0.54
CTDSPL2-201ENST00000260327 SDF4Q9BRK5 362 aa11.7□□□□□ -0.54
CTDSPL2-201ENST00000260327 CAGE1Q8TC20 777 aa11.7□□□□□ -0.54
CTDSPL2-201ENST00000260327 TSPYL4Q9UJ04 414 aa11.7□□□□□ -0.54
CTDSPL2-201ENST00000260327 CPLX1O14810 134 aa11.7□□□□□ -0.54
CTDSPL2-201ENST00000260327 K7ELQ4 463 aaPredicted RBP11.69□□□□□ -0.54
CTDSPL2-201ENST00000260327 MARCH6O60337 910 aa11.69□□□□□ -0.54
CTDSPL2-201ENST00000260327 WWC1Q8IX03 1113 aa11.69□□□□□ -0.54
CTDSPL2-201ENST00000260327 KIAA1107Q9UPP5 1409 aa11.69□□□□□ -0.54
CTDSPL2-201ENST00000260327 SLC12A5Q9H2X9 1139 aa11.69□□□□□ -0.54
CTDSPL2-201ENST00000260327 TEFQ10587 303 aa11.69□□□□□ -0.54
CTDSPL2-201ENST00000260327 FAM177A1Q8N128 213 aaPredicted RBP11.69□□□□□ -0.54
CTDSPL2-201ENST00000260327 ANKRD20A12PQ8NF67 263 aa11.69□□□□□ -0.54
CTDSPL2-201ENST00000260327 TRIM29Q14134 588 aa11.69□□□□□ -0.54
CTDSPL2-201ENST00000260327 NAT10Q9H0A0 1025 aaKnown RBP11.69□□□□□ -0.54
CTDSPL2-201ENST00000260327 KDM4AO75164 1064 aa11.68□□□□□ -0.54
CTDSPL2-201ENST00000260327 SYCE3A1L190 88 aa11.68□□□□□ -0.54
CTDSPL2-201ENST00000260327 CEBPZQ03701 1054 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms