RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 RTEL1-TNFRSF6BF6WH68 1400 aa22.41■■□□□ 1.18
EFR3A-201ENST00000254624 ADAMTS8Q9UP79 889 aa22.4■■□□□ 1.18
EFR3A-201ENST00000254624 AMOTL1Q8IY63 956 aa22.4■■□□□ 1.18
EFR3A-201ENST00000254624 PDE4AP27815 886 aa22.4■■□□□ 1.18
EFR3A-201ENST00000254624 PLB1Q6P1J6 1458 aa22.39■■□□□ 1.18
EFR3A-201ENST00000254624 ATAD2Q6PL18 1390 aa22.39■■□□□ 1.17
EFR3A-201ENST00000254624 NAIPQ13075 1403 aa22.38■■□□□ 1.17
EFR3A-201ENST00000254624 NBPF8Q3BBV2 869 aa22.38■■□□□ 1.17
EFR3A-201ENST00000254624 TSHZ2Q9NRE2 1034 aa22.38■■□□□ 1.17
EFR3A-201ENST00000254624 RIC3Q7Z5B4 369 aa22.38■■□□□ 1.17
EFR3A-201ENST00000254624 TCP11L2Q8N4U5 519 aa22.38■■□□□ 1.17
EFR3A-201ENST00000254624 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
EFR3A-201ENST00000254624 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
EFR3A-201ENST00000254624 ZKSCAN1P17029 563 aaPredicted RBP22.36■■□□□ 1.17
EFR3A-201ENST00000254624 SYNE3Q6ZMZ3 975 aa22.36■■□□□ 1.17
EFR3A-201ENST00000254624 RASSF8Q8NHQ8 419 aa22.36■■□□□ 1.17
EFR3A-201ENST00000254624 ADGRL1O94910 1474 aa22.36■■□□□ 1.17
EFR3A-201ENST00000254624 KIAA2012Q0VF49 1180 aa22.36■■□□□ 1.17
EFR3A-201ENST00000254624 PTPN23Q9H3S7 1636 aa22.36■■□□□ 1.17
EFR3A-201ENST00000254624 PHF14O94880 888 aa22.36■■□□□ 1.17
EFR3A-201ENST00000254624 ATP6V1DQ9Y5K8 247 aa22.36■■□□□ 1.17
EFR3A-201ENST00000254624 CCDC30Q5VVM6 783 aa22.36■■□□□ 1.17
EFR3A-201ENST00000254624 CABP1Q9NZU7 370 aa22.35■■□□□ 1.17
EFR3A-201ENST00000254624 PRKAR2BP31323 418 aa22.34■■□□□ 1.17
EFR3A-201ENST00000254624 SLC12A5Q9H2X9 1139 aa22.34■■□□□ 1.17
EFR3A-201ENST00000254624 ERC2O15083 957 aa22.34■■□□□ 1.17
EFR3A-201ENST00000254624 H3BQV1 296 aa22.34■■□□□ 1.17
EFR3A-201ENST00000254624 AKAP17AQ02040 695 aaKnown RBP22.34■■□□□ 1.17
EFR3A-201ENST00000254624 IFFO2Q5TF58 517 aa22.34■■□□□ 1.17
EFR3A-201ENST00000254624 FAM184AQ8NB25 1140 aa22.34■■□□□ 1.17
EFR3A-201ENST00000254624 CPLX2Q6PUV4 134 aaKnown RBP22.33■■□□□ 1.17
EFR3A-201ENST00000254624 FOXD4L1Q9NU39 408 aa22.33■■□□□ 1.17
EFR3A-201ENST00000254624 VPS37DQ86XT2 251 aa22.33■■□□□ 1.17
EFR3A-201ENST00000254624 GZF1Q9H116 711 aaPredicted RBP22.33■■□□□ 1.17
EFR3A-201ENST00000254624 SF3A1Q15459 793 aaKnown RBP22.33■■□□□ 1.16
EFR3A-201ENST00000254624 DDX11L8A8MPP1 907 aa22.32■■□□□ 1.16
EFR3A-201ENST00000254624 RNF20Q5VTR2 975 aa22.32■■□□□ 1.16
EFR3A-201ENST00000254624 TATP17735 454 aaPredicted RBP22.32■■□□□ 1.16
EFR3A-201ENST00000254624 UBTFL1P0CB47 393 aaPredicted RBP22.31■■□□□ 1.16
EFR3A-201ENST00000254624 ABCC5O15440 1437 aa22.31■■□□□ 1.16
EFR3A-201ENST00000254624 GOLGA6L3A6NEY3 463 aa22.3■■□□□ 1.16
EFR3A-201ENST00000254624 DEKP35659 375 aaKnown RBP22.3■■□□□ 1.16
EFR3A-201ENST00000254624 MARCH6O60337 910 aa22.3■■□□□ 1.16
EFR3A-201ENST00000254624 AKNAQ7Z591 1439 aa22.29■■□□□ 1.16
EFR3A-201ENST00000254624 PNISRQ8TF01 805 aaKnown RBP22.29■■□□□ 1.16
EFR3A-201ENST00000254624 GNAI3P08754 354 aa22.29■■□□□ 1.16
EFR3A-201ENST00000254624 INTS3Q68E01 1043 aaKnown RBP22.28■■□□□ 1.16
EFR3A-201ENST00000254624 TRIM34Q9BYJ4 488 aa22.28■■□□□ 1.16
EFR3A-201ENST00000254624 AIMP1Q12904 312 aaKnown RBP22.28■■□□□ 1.16
EFR3A-201ENST00000254624 SLC26A8Q96RN1 970 aa22.26■■□□□ 1.15
EFR3A-201ENST00000254624 PPP6R1Q9UPN7 881 aa22.26■■□□□ 1.15
EFR3A-201ENST00000254624 WWC1Q8IX03 1113 aa22.25■■□□□ 1.15
EFR3A-201ENST00000254624 ZNF608Q9ULD9 1512 aaPredicted RBP22.25■■□□□ 1.15
EFR3A-201ENST00000254624 TRDNQ13061 729 aa22.25■■□□□ 1.15
EFR3A-201ENST00000254624 ANO2Q9NQ90 1003 aa22.25■■□□□ 1.15
EFR3A-201ENST00000254624 UNC13AQ9UPW8 1703 aa22.25■■□□□ 1.15
EFR3A-201ENST00000254624 CT47B1P0C2W7 299 aaPredicted RBP22.25■■□□□ 1.15
EFR3A-201ENST00000254624 APPP05067 770 aa22.24■■□□□ 1.15
EFR3A-201ENST00000254624 TWISTNBQ3B726 338 aaPredicted RBP22.23■■□□□ 1.15
EFR3A-201ENST00000254624 PANK1Q8TE04 598 aa22.23■■□□□ 1.15
EFR3A-201ENST00000254624 RBM33Q96EV2 1170 aaKnown RBP22.23■■□□□ 1.15
EFR3A-201ENST00000254624 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
EFR3A-201ENST00000254624 SKOR2Q2VWA4 1001 aaPredicted RBP22.23■■□□□ 1.15
EFR3A-201ENST00000254624 SULT6B1Q6IMI4 303 aa22.23■■□□□ 1.15
EFR3A-201ENST00000254624 WDR63Q8IWG1 891 aa22.23■■□□□ 1.15
EFR3A-201ENST00000254624 KIF6Q6ZMV9 814 aa22.22■■□□□ 1.15
EFR3A-201ENST00000254624 TRIM29Q14134 588 aa22.22■■□□□ 1.15
EFR3A-201ENST00000254624 DENND4BO75064 1496 aaPredicted RBP22.22■■□□□ 1.15
EFR3A-201ENST00000254624 EXOSC9Q06265 439 aaKnown RBP22.21■■□□□ 1.15
EFR3A-201ENST00000254624 VPS53Q5VIR6 699 aa22.21■■□□□ 1.15
EFR3A-201ENST00000254624 NINLQ9Y2I6 1382 aa22.2■■□□□ 1.14
EFR3A-201ENST00000254624 STRN4Q9NRL3 753 aa22.2■■□□□ 1.14
EFR3A-201ENST00000254624 CCDC61Q9Y6R9 512 aa22.2■■□□□ 1.14
EFR3A-201ENST00000254624 LNPKQ9C0E8 428 aa22.19■■□□□ 1.14
EFR3A-201ENST00000254624 USP35Q9P2H5 1018 aa22.19■■□□□ 1.14
EFR3A-201ENST00000254624 CPLX1O14810 134 aa22.19■■□□□ 1.14
EFR3A-201ENST00000254624 PDE3AQ14432 1141 aa22.19■■□□□ 1.14
EFR3A-201ENST00000254624 NUDT16Q96DE0 195 aaKnown RBP22.19■■□□□ 1.14
EFR3A-201ENST00000254624 FANCAO15360 1455 aa22.18■■□□□ 1.14
EFR3A-201ENST00000254624 FOXD4L5Q5VV16 416 aaPredicted RBP22.18■■□□□ 1.14
EFR3A-201ENST00000254624 FOXD4L4Q8WXT5 416 aaPredicted RBP22.18■■□□□ 1.14
EFR3A-201ENST00000254624 NEUROD6Q96NK8 337 aa22.18■■□□□ 1.14
EFR3A-201ENST00000254624 RTN4Q9NQC3 1192 aaKnown RBP22.18■■□□□ 1.14
EFR3A-201ENST00000254624 TOM1L2Q6ZVM7 507 aa22.17■■□□□ 1.14
EFR3A-201ENST00000254624 FAM135AQ9P2D6 1515 aa22.17■■□□□ 1.14
EFR3A-201ENST00000254624 ERICH2A1L162 156 aa22.17■■□□□ 1.14
EFR3A-201ENST00000254624 CDC45O75419 566 aa22.17■■□□□ 1.14
EFR3A-201ENST00000254624 ZNF530Q6P9A1 599 aaPredicted RBP22.17■■□□□ 1.14
EFR3A-201ENST00000254624 NCOA1Q15788 1441 aa22.17■■□□□ 1.14
EFR3A-201ENST00000254624 CABP4P57796 275 aa22.16■■□□□ 1.14
EFR3A-201ENST00000254624 CLASRPQ8N2M8 674 aaKnown RBP22.16■■□□□ 1.14
EFR3A-201ENST00000254624 KCNH5Q8NCM2 988 aa22.16■■□□□ 1.14
EFR3A-201ENST00000254624 ERC1Q8IUD2 1116 aa22.16■■□□□ 1.14
EFR3A-201ENST00000254624 FCHSD2O94868 740 aa22.16■■□□□ 1.14
EFR3A-201ENST00000254624 RBM42Q9BTD8 480 aaKnown RBP22.16■■□□□ 1.14
EFR3A-201ENST00000254624 THOC2Q8NI27 1593 aaKnown RBP22.15■■□□□ 1.14
EFR3A-201ENST00000254624 NSD3Q9BZ95 1437 aa22.15■■□□□ 1.14
EFR3A-201ENST00000254624 MCTP1Q6DN14 999 aa22.14■■□□□ 1.14
EFR3A-201ENST00000254624 CNTROBQ8N137 903 aa22.14■■□□□ 1.14
EFR3A-201ENST00000254624 CDCA7LQ96GN5 454 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms