RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 CABP1Q9NZU7 370 aa20.24■□□□□ 0.83
RFX1-201ENST00000254325 NPC1L1Q9UHC9 1359 aa20.24■□□□□ 0.83
RFX1-201ENST00000254325 NUTM2FA1L443 756 aa20.24■□□□□ 0.83
RFX1-201ENST00000254325 C20orf194Q5TEA3 1177 aa20.24■□□□□ 0.83
RFX1-201ENST00000254325 PLEKHH1Q9ULM0 1364 aa20.23■□□□□ 0.83
RFX1-201ENST00000254325 BCAR3O75815 825 aa20.23■□□□□ 0.83
RFX1-201ENST00000254325 PDE4AP27815 886 aa20.23■□□□□ 0.83
RFX1-201ENST00000254325 CENPQQ7L2Z9 268 aaPredicted RBP20.23■□□□□ 0.83
RFX1-201ENST00000254325 ERVK-7P63135 1459 aa20.23■□□□□ 0.83
RFX1-201ENST00000254325 RNF17Q9BXT8 1623 aaKnown RBP20.23■□□□□ 0.83
RFX1-201ENST00000254325 SOX12O15370 315 aa20.23■□□□□ 0.83
RFX1-201ENST00000254325 ATAD2Q6PL18 1390 aa20.22■□□□□ 0.83
RFX1-201ENST00000254325 BLMP54132 1417 aaPredicted RBP20.22■□□□□ 0.83
RFX1-201ENST00000254325 DIAPH1O60610 1272 aaKnown RBP20.22■□□□□ 0.83
RFX1-201ENST00000254325 COG6Q9Y2V7 657 aa20.22■□□□□ 0.83
RFX1-201ENST00000254325 KDM5AP29375 1690 aaKnown RBP20.22■□□□□ 0.83
RFX1-201ENST00000254325 MAP3K4Q9Y6R4 1608 aa20.21■□□□□ 0.83
RFX1-201ENST00000254325 KIDINS220Q9ULH0 1771 aa20.21■□□□□ 0.83
RFX1-201ENST00000254325 WWC1Q8IX03 1113 aa20.21■□□□□ 0.83
RFX1-201ENST00000254325 WAPLQ7Z5K2 1190 aa20.21■□□□□ 0.83
RFX1-201ENST00000254325 CEP152O94986 1710 aa20.21■□□□□ 0.83
RFX1-201ENST00000254325 SYNMO15061 1565 aa20.2■□□□□ 0.82
RFX1-201ENST00000254325 TXNDC2Q86VQ3 553 aa20.2■□□□□ 0.82
RFX1-201ENST00000254325 ABCC3O15438 1527 aa20.19■□□□□ 0.82
RFX1-201ENST00000254325 SMC4Q9NTJ3 1288 aa20.18■□□□□ 0.82
RFX1-201ENST00000254325 MS4A1P11836 297 aa20.18■□□□□ 0.82
RFX1-201ENST00000254325 IPO9Q96P70 1041 aaKnown RBP20.18■□□□□ 0.82
RFX1-201ENST00000254325 SBNO2Q9Y2G9 1366 aa20.18■□□□□ 0.82
RFX1-201ENST00000254325 EID1Q9Y6B2 187 aa20.18■□□□□ 0.82
RFX1-201ENST00000254325 PPRC1Q5VV67 1664 aaKnown RBP20.18■□□□□ 0.82
RFX1-201ENST00000254325 INSRP06213 1382 aa20.17■□□□□ 0.82
RFX1-201ENST00000254325 DDRGK1Q96HY6 314 aa20.17■□□□□ 0.82
RFX1-201ENST00000254325 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
RFX1-201ENST00000254325 PANK1Q8TE04 598 aa20.17■□□□□ 0.82
RFX1-201ENST00000254325 UPF2Q9HAU5 1272 aaKnown RBP20.16■□□□□ 0.82
RFX1-201ENST00000254325 ANKRD36BQ8N2N9 1353 aa20.16■□□□□ 0.82
RFX1-201ENST00000254325 DEPDC5O75140 1603 aa20.16■□□□□ 0.82
RFX1-201ENST00000254325 RIPK4P57078 832 aa20.15■□□□□ 0.82
RFX1-201ENST00000254325 ZMYM4Q5VZL5 1548 aa20.15■□□□□ 0.82
RFX1-201ENST00000254325 C14orf37Q86TY3 774 aa20.15■□□□□ 0.82
RFX1-201ENST00000254325 POLR3AO14802 1390 aaPredicted RBP20.15■□□□□ 0.82
RFX1-201ENST00000254325 COG3Q96JB2 828 aa20.15■□□□□ 0.82
RFX1-201ENST00000254325 ABCA6Q8N139 1617 aa20.14■□□□□ 0.81
RFX1-201ENST00000254325 LMTK2Q8IWU2 1503 aa20.14■□□□□ 0.81
RFX1-201ENST00000254325 VWDEQ8N2E2 1590 aa20.13■□□□□ 0.81
RFX1-201ENST00000254325 NKTRP30414 1462 aaKnown RBP20.13■□□□□ 0.81
RFX1-201ENST00000254325 PUS7Q96PZ0 661 aaKnown RBP20.13■□□□□ 0.81
RFX1-201ENST00000254325 MSH5O43196 834 aa20.12■□□□□ 0.81
RFX1-201ENST00000254325 WDR63Q8IWG1 891 aa20.12■□□□□ 0.81
RFX1-201ENST00000254325 NSD2O96028 1365 aa20.11■□□□□ 0.81
RFX1-201ENST00000254325 SKAP1Q86WV1 359 aa20.11■□□□□ 0.81
RFX1-201ENST00000254325 ITPRIPQ8IWB1 547 aa20.11■□□□□ 0.81
RFX1-201ENST00000254325 HMOX1P09601 288 aa20.11■□□□□ 0.81
RFX1-201ENST00000254325 SPINK5Q9NQ38 1064 aaPredicted RBP20.11■□□□□ 0.81
RFX1-201ENST00000254325 ADGRB3O60242 1522 aa20.1■□□□□ 0.81
RFX1-201ENST00000254325 IQGAP1P46940 1657 aa20.1■□□□□ 0.81
RFX1-201ENST00000254325 PMFBP1Q8TBY8 1022 aa20.09■□□□□ 0.81
RFX1-201ENST00000254325 ZKSCAN2Q63HK3 967 aa20.09■□□□□ 0.81
RFX1-201ENST00000254325 TSR2Q969E8 191 aaKnown RBP20.09■□□□□ 0.81
RFX1-201ENST00000254325 YTHDC2Q9H6S0 1430 aaKnown RBP20.08■□□□□ 0.81
RFX1-201ENST00000254325 IPO8O15397 1037 aaKnown RBP20.08■□□□□ 0.81
RFX1-201ENST00000254325 RWDD1Q9H446 243 aaPredicted RBP20.08■□□□□ 0.81
RFX1-201ENST00000254325 NINLQ9Y2I6 1382 aa20.08■□□□□ 0.81
RFX1-201ENST00000254325 PLEKHG5O94827 1062 aa20.08■□□□□ 0.8
RFX1-201ENST00000254325 PDE3AQ14432 1141 aa20.08■□□□□ 0.8
RFX1-201ENST00000254325 CALD1Q05682 793 aaKnown RBP20.08■□□□□ 0.8
RFX1-201ENST00000254325 A0A1W2PP64 1363 aa20.07■□□□□ 0.8
RFX1-201ENST00000254325 FYB1O15117 783 aa20.07■□□□□ 0.8
RFX1-201ENST00000254325 MROH1Q8NDA8 1641 aa20.06■□□□□ 0.8
RFX1-201ENST00000254325 RIMS2Q9UQ26 1411 aa20.06■□□□□ 0.8
RFX1-201ENST00000254325 PRKAR2BP31323 418 aa20.06■□□□□ 0.8
RFX1-201ENST00000254325 EXOSC9Q06265 439 aaKnown RBP20.05■□□□□ 0.8
RFX1-201ENST00000254325 NGDNQ8NEJ9 315 aaKnown RBP20.05■□□□□ 0.8
RFX1-201ENST00000254325 ZBTB7CA1YPR0 619 aa20.05■□□□□ 0.8
RFX1-201ENST00000254325 TSPOAP1O95153 1857 aa20.05■□□□□ 0.8
RFX1-201ENST00000254325 FAM161AQ3B820 660 aa20.05■□□□□ 0.8
RFX1-201ENST00000254325 NUDT16Q96DE0 195 aaKnown RBP20.04■□□□□ 0.8
RFX1-201ENST00000254325 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
RFX1-201ENST00000254325 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
RFX1-201ENST00000254325 SLC26A8Q96RN1 970 aa20.04■□□□□ 0.8
RFX1-201ENST00000254325 BACH2Q9BYV9 841 aa20.04■□□□□ 0.8
RFX1-201ENST00000254325 ELL2O00472 640 aaPredicted RBP20.03■□□□□ 0.8
RFX1-201ENST00000254325 ARHGAP31Q2M1Z3 1444 aa20.03■□□□□ 0.8
RFX1-201ENST00000254325 DZIP1LQ8IYY4 767 aaKnown RBP20.03■□□□□ 0.8
RFX1-201ENST00000254325 DIP2CQ9Y2E4 1556 aa20.03■□□□□ 0.8
RFX1-201ENST00000254325 WASLO00401 505 aaPredicted RBP20.03■□□□□ 0.8
RFX1-201ENST00000254325 CCDC61Q9Y6R9 512 aa20.02■□□□□ 0.8
RFX1-201ENST00000254325 FBLN1P23142 703 aa20.02■□□□□ 0.79
RFX1-201ENST00000254325 RARSP54136 660 aaKnown RBP20.01■□□□□ 0.79
RFX1-201ENST00000254325 KIAA1210Q9ULL0 1709 aa20.01■□□□□ 0.79
RFX1-201ENST00000254325 CEBPAP49715 358 aaPredicted RBP20.01■□□□□ 0.79
RFX1-201ENST00000254325 FRMPD1Q5SYB0 1578 aa20.01■□□□□ 0.79
RFX1-201ENST00000254325 CAMSAP1Q5T5Y3 1602 aa20■□□□□ 0.79
RFX1-201ENST00000254325 NME9Q86XW9 330 aa20■□□□□ 0.79
RFX1-201ENST00000254325 LMOD3Q0VAK6 560 aa20■□□□□ 0.79
RFX1-201ENST00000254325 ZNF521Q96K83 1311 aa20■□□□□ 0.79
RFX1-201ENST00000254325 ZMYM3Q14202 1370 aa19.99■□□□□ 0.79
RFX1-201ENST00000254325 MROH2AA6NES4 1674 aa19.99■□□□□ 0.79
RFX1-201ENST00000254325 PAK3O75914 559 aaPredicted RBP19.98■□□□□ 0.79
RFX1-201ENST00000254325 TNRQ92752 1358 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms