RNA–Protein interactions for RNA: ENST00000249364.8

CALU-201, Transcript of calumenin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALU, Length 3,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-201ENST00000249364 XRN1Q8IZH2 1706 aaKnown RBP16.54■□□□□ 0.24
CALU-201ENST00000249364 MYOM1P52179 1685 aa16.53■□□□□ 0.24
CALU-201ENST00000249364 ROBO2Q9HCK4 1378 aa16.53■□□□□ 0.24
CALU-201ENST00000249364 PLEKHH1Q9ULM0 1364 aa16.53■□□□□ 0.24
CALU-201ENST00000249364 CHD2O14647 1828 aaKnown RBP16.53■□□□□ 0.24
CALU-201ENST00000249364 NCKAP5LQ9HCH0 1330 aa16.53■□□□□ 0.24
CALU-201ENST00000249364 PANK3Q9H999 370 aa16.52■□□□□ 0.23
CALU-201ENST00000249364 LMTK3Q96Q04 1460 aa16.51■□□□□ 0.23
CALU-201ENST00000249364 ATAD2Q6PL18 1390 aa16.51■□□□□ 0.23
CALU-201ENST00000249364 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
CALU-201ENST00000249364 PER1O15534 1290 aaPredicted RBP16.5■□□□□ 0.23
CALU-201ENST00000249364 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
CALU-201ENST00000249364 CCER2I3L3R5 266 aa16.49■□□□□ 0.23
CALU-201ENST00000249364 CDK19Q9BWU1 502 aa16.49■□□□□ 0.23
CALU-201ENST00000249364 PRKRIP1Q9H875 184 aaPredicted RBP16.49■□□□□ 0.23
CALU-201ENST00000249364 ADGRB2O60241 1585 aa16.48■□□□□ 0.23
CALU-201ENST00000249364 KTN1Q86UP2 1357 aaKnown RBP16.48■□□□□ 0.23
CALU-201ENST00000249364 WASLO00401 505 aaPredicted RBP16.48■□□□□ 0.23
CALU-201ENST00000249364 CABP2Q9NPB3 220 aa16.48■□□□□ 0.23
CALU-201ENST00000249364 KCNA6P17658 529 aa16.46■□□□□ 0.23
CALU-201ENST00000249364 HSPA2P54652 639 aa16.46■□□□□ 0.23
CALU-201ENST00000249364 KNSTRNQ9Y448 316 aa16.46■□□□□ 0.23
CALU-201ENST00000249364 TMC1Q8TDI8 760 aa16.46■□□□□ 0.23
CALU-201ENST00000249364 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.46■□□□□ 0.23
CALU-201ENST00000249364 NWD1Q149M9 1564 aa16.44■□□□□ 0.22
CALU-201ENST00000249364 SLC12A5Q9H2X9 1139 aa16.44■□□□□ 0.22
CALU-201ENST00000249364 RALBP1Q15311 655 aa16.44■□□□□ 0.22
CALU-201ENST00000249364 NPC1L1Q9UHC9 1359 aa16.43■□□□□ 0.22
CALU-201ENST00000249364 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
CALU-201ENST00000249364 TERF2IPQ9NYB0 399 aa16.42■□□□□ 0.22
CALU-201ENST00000249364 STRCQ7RTU9 1775 aa16.41■□□□□ 0.22
CALU-201ENST00000249364 NKTRP30414 1462 aaKnown RBP16.4■□□□□ 0.22
CALU-201ENST00000249364 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
CALU-201ENST00000249364 NUDT16Q96DE0 195 aaKnown RBP16.4■□□□□ 0.22
CALU-201ENST00000249364 ATP7BP35670 1465 aa16.39■□□□□ 0.21
CALU-201ENST00000249364 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.21
CALU-201ENST00000249364 CARD14Q9BXL6 1004 aa16.39■□□□□ 0.21
CALU-201ENST00000249364 PARD3Q8TEW0 1356 aa16.39■□□□□ 0.21
CALU-201ENST00000249364 HDGFL2Q7Z4V5 671 aaPredicted RBP16.38■□□□□ 0.21
CALU-201ENST00000249364 USP32Q8NFA0 1604 aa16.38■□□□□ 0.21
CALU-201ENST00000249364 CABP1Q9NZU7 370 aa16.38■□□□□ 0.21
CALU-201ENST00000249364 NSD3Q9BZ95 1437 aa16.37■□□□□ 0.21
CALU-201ENST00000249364 PPIP5K1Q6PFW1 1433 aa16.36■□□□□ 0.21
CALU-201ENST00000249364 ADGRL3Q9HAR2 1447 aa16.36■□□□□ 0.21
CALU-201ENST00000249364 A0A1W2PP64 1363 aa16.36■□□□□ 0.21
CALU-201ENST00000249364 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
CALU-201ENST00000249364 CDC42BPGQ6DT37 1551 aa16.36■□□□□ 0.21
CALU-201ENST00000249364 CC2D1BQ5T0F9 858 aaKnown RBP16.36■□□□□ 0.21
CALU-201ENST00000249364 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
CALU-201ENST00000249364 ANKARQ7Z5J8 1434 aa16.35■□□□□ 0.21
CALU-201ENST00000249364 CGNL1Q0VF96 1302 aa16.35■□□□□ 0.21
CALU-201ENST00000249364 CD163L1Q9NR16 1453 aa16.35■□□□□ 0.21
CALU-201ENST00000249364 PROSER2Q86WR7 435 aaPredicted RBP16.35■□□□□ 0.21
CALU-201ENST00000249364 ITSN1Q15811 1721 aa16.35■□□□□ 0.21
CALU-201ENST00000249364 NALCNQ8IZF0 1738 aa16.35■□□□□ 0.21
CALU-201ENST00000249364 PRR36Q9H6K5 1346 aa16.34■□□□□ 0.21
CALU-201ENST00000249364 NCOA3Q9Y6Q9 1424 aa16.34■□□□□ 0.21
CALU-201ENST00000249364 NSD2O96028 1365 aa16.34■□□□□ 0.21
CALU-201ENST00000249364 TOPAZ1Q8N9V7 1692 aa16.34■□□□□ 0.21
CALU-201ENST00000249364 CNGB1Q14028 1251 aaPredicted RBP16.34■□□□□ 0.21
CALU-201ENST00000249364 FMN2Q9NZ56 1722 aa16.34■□□□□ 0.21
CALU-201ENST00000249364 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
CALU-201ENST00000249364 PLEKHG3A1L390 1219 aa16.33■□□□□ 0.2
CALU-201ENST00000249364 CPSF1Q10570 1443 aaKnown RBP16.33■□□□□ 0.2
CALU-201ENST00000249364 BRD4O60885 1362 aaPredicted RBP16.32■□□□□ 0.2
CALU-201ENST00000249364 NLRP13Q86W25 1043 aa16.32■□□□□ 0.2
CALU-201ENST00000249364 C14orf37Q86TY3 774 aa16.31■□□□□ 0.2
CALU-201ENST00000249364 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
CALU-201ENST00000249364 STRCP1A6NGW2 1772 aa16.31■□□□□ 0.2
CALU-201ENST00000249364 AKAP12Q02952 1782 aa16.3■□□□□ 0.2
CALU-201ENST00000249364 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
CALU-201ENST00000249364 C19orf44Q9H6X5 657 aa16.29■□□□□ 0.2
CALU-201ENST00000249364 MON2Q7Z3U7 1717 aa16.29■□□□□ 0.2
CALU-201ENST00000249364 NUTM2FA1L443 756 aa16.28■□□□□ 0.2
CALU-201ENST00000249364 RGPD8O14715 1765 aaPredicted RBP16.28■□□□□ 0.2
CALU-201ENST00000249364 TMEM94Q12767 1356 aa16.27■□□□□ 0.19
CALU-201ENST00000249364 MORC1Q86VD1 984 aa16.27■□□□□ 0.19
CALU-201ENST00000249364 DCCP43146 1447 aa16.27■□□□□ 0.19
CALU-201ENST00000249364 ACEP12821 1306 aa16.26■□□□□ 0.19
CALU-201ENST00000249364 RBM33Q96EV2 1170 aaKnown RBP16.26■□□□□ 0.19
CALU-201ENST00000249364 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
CALU-201ENST00000249364 CCDC184Q52MB2 194 aa16.26■□□□□ 0.19
CALU-201ENST00000249364 ANKRD26Q9UPS8 1709 aa16.26■□□□□ 0.19
CALU-201ENST00000249364 PPP2R1AP30153 589 aa16.26■□□□□ 0.19
CALU-201ENST00000249364 KIF20BQ96Q89 1820 aa16.25■□□□□ 0.19
CALU-201ENST00000249364 FYB1O15117 783 aa16.25■□□□□ 0.19
CALU-201ENST00000249364 NGDNQ8NEJ9 315 aaKnown RBP16.24■□□□□ 0.19
CALU-201ENST00000249364 USP6P35125 1406 aa16.23■□□□□ 0.19
CALU-201ENST00000249364 ATF3P18847 181 aa16.22■□□□□ 0.19
CALU-201ENST00000249364 ZNF335Q9H4Z2 1342 aaPredicted RBP16.22■□□□□ 0.19
CALU-201ENST00000249364 PMFBP1Q8TBY8 1022 aa16.22■□□□□ 0.19
CALU-201ENST00000249364 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
CALU-201ENST00000249364 PHF8Q9UPP1 1060 aa16.22■□□□□ 0.19
CALU-201ENST00000249364 MSH6P52701 1360 aa16.22■□□□□ 0.19
CALU-201ENST00000249364 LRRC7Q96NW7 1537 aa16.21■□□□□ 0.19
CALU-201ENST00000249364 CADPS2Q86UW7 1296 aa16.21■□□□□ 0.19
CALU-201ENST00000249364 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.21■□□□□ 0.19
CALU-201ENST00000249364 GGNBP2Q9H3C7 697 aa16.21■□□□□ 0.19
CALU-201ENST00000249364 NRKQ7Z2Y5 1582 aa16.21■□□□□ 0.19
CALU-201ENST00000249364 TTC21AQ8NDW8 1320 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms