RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 PTPRUQ92729 1446 aa18.8■□□□□ 0.6
PDZD11-201ENST00000239666 PHLPP1O60346 1717 aa18.8■□□□□ 0.6
PDZD11-201ENST00000239666 METP08581 1390 aa18.8■□□□□ 0.6
PDZD11-201ENST00000239666 HRCP23327 699 aa18.79■□□□□ 0.6
PDZD11-201ENST00000239666 SPATA31A6Q5VVP1 1343 aa18.77■□□□□ 0.6
PDZD11-201ENST00000239666 PPLO60437 1756 aa18.77■□□□□ 0.6
PDZD11-201ENST00000239666 PTCH1Q13635 1447 aa18.76■□□□□ 0.59
PDZD11-201ENST00000239666 ADGRL3Q9HAR2 1447 aa18.75■□□□□ 0.59
PDZD11-201ENST00000239666 PRAG1Q86YV5 1406 aa18.74■□□□□ 0.59
PDZD11-201ENST00000239666 STAC3Q96MF2 364 aa18.74■□□□□ 0.59
PDZD11-201ENST00000239666 RGL3Q3MIN7 710 aa18.73■□□□□ 0.59
PDZD11-201ENST00000239666 AHDC1Q5TGY3 1603 aaPredicted RBP18.73■□□□□ 0.59
PDZD11-201ENST00000239666 BRINP3Q76B58 766 aa18.72■□□□□ 0.59
PDZD11-201ENST00000239666 LRRC59Q96AG4 307 aaKnown RBP18.72■□□□□ 0.59
PDZD11-201ENST00000239666 SPATA31E1Q6ZUB1 1445 aa18.71■□□□□ 0.59
PDZD11-201ENST00000239666 RAB3GAP2Q9H2M9 1393 aa18.69■□□□□ 0.58
PDZD11-201ENST00000239666 MST1RQ04912 1400 aa18.69■□□□□ 0.58
PDZD11-201ENST00000239666 FBXO3Q9UK99 471 aa18.69■□□□□ 0.58
PDZD11-201ENST00000239666 COL16A1Q07092 1604 aaPredicted RBP18.68■□□□□ 0.58
PDZD11-201ENST00000239666 SETD1AO15047 1707 aaKnown RBP18.68■□□□□ 0.58
PDZD11-201ENST00000239666 MEX3CQ5U5Q3 659 aaKnown RBP18.67■□□□□ 0.58
PDZD11-201ENST00000239666 SIRT1Q96EB6 747 aa18.67■□□□□ 0.58
PDZD11-201ENST00000239666 ZNF772Q68DY9 489 aaPredicted RBP18.66■□□□□ 0.58
PDZD11-201ENST00000239666 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
PDZD11-201ENST00000239666 ADGRF5Q8IZF2 1346 aa18.66■□□□□ 0.58
PDZD11-201ENST00000239666 SHPRHQ149N8 1683 aa18.66■□□□□ 0.58
PDZD11-201ENST00000239666 ASXL1Q8IXJ9 1541 aa18.65■□□□□ 0.58
PDZD11-201ENST00000239666 IFT172Q9UG01 1749 aa18.65■□□□□ 0.58
PDZD11-201ENST00000239666 ABCC11Q96J66 1382 aa18.65■□□□□ 0.58
PDZD11-201ENST00000239666 ROBO2Q9HCK4 1378 aa18.65■□□□□ 0.58
PDZD11-201ENST00000239666 NALCNQ8IZF0 1738 aa18.63■□□□□ 0.57
PDZD11-201ENST00000239666 LRPPRCP42704 1394 aaKnown RBP18.63■□□□□ 0.57
PDZD11-201ENST00000239666 DHX57Q6P158 1386 aaKnown RBP18.63■□□□□ 0.57
PDZD11-201ENST00000239666 TECPR2O15040 1411 aa18.63■□□□□ 0.57
PDZD11-201ENST00000239666 PIK3C2GO75747 1445 aa18.63■□□□□ 0.57
PDZD11-201ENST00000239666 C14orf93Q9H972 538 aaKnown RBP18.62■□□□□ 0.57
PDZD11-201ENST00000239666 C1orf167Q5SNV9 1468 aa18.62■□□□□ 0.57
PDZD11-201ENST00000239666 LAMC1P11047 1609 aa18.62■□□□□ 0.57
PDZD11-201ENST00000239666 NHSL1Q5SYE7 1610 aa18.62■□□□□ 0.57
PDZD11-201ENST00000239666 RGS17Q9UGC6 210 aaPredicted RBP18.61■□□□□ 0.57
PDZD11-201ENST00000239666 MYOM2P54296 1465 aa18.6■□□□□ 0.57
PDZD11-201ENST00000239666 STK26Q9P289 416 aa18.59■□□□□ 0.57
PDZD11-201ENST00000239666 KNDC1Q76NI1 1749 aa18.58■□□□□ 0.57
PDZD11-201ENST00000239666 NPHP3Q7Z494 1330 aa18.58■□□□□ 0.57
PDZD11-201ENST00000239666 CDC42BPGQ6DT37 1551 aa18.58■□□□□ 0.56
PDZD11-201ENST00000239666 YTHDC2Q9H6S0 1430 aaKnown RBP18.57■□□□□ 0.56
PDZD11-201ENST00000239666 ESCO1Q5FWF5 840 aa18.56■□□□□ 0.56
PDZD11-201ENST00000239666 NRXN1Q9ULB1 1477 aa18.56■□□□□ 0.56
PDZD11-201ENST00000239666 SOS2Q07890 1332 aaPredicted RBP18.55■□□□□ 0.56
PDZD11-201ENST00000239666 TMEM132EQ6IEE7 984 aa18.55■□□□□ 0.56
PDZD11-201ENST00000239666 POTEAQ6S8J7 498 aa18.54■□□□□ 0.56
PDZD11-201ENST00000239666 NUTM2BA6NNL0 878 aaPredicted RBP18.53■□□□□ 0.56
PDZD11-201ENST00000239666 NUTM2EB1AL46 878 aaPredicted RBP18.53■□□□□ 0.56
PDZD11-201ENST00000239666 WAPLQ7Z5K2 1190 aa18.53■□□□□ 0.56
PDZD11-201ENST00000239666 NUTM2AQ8IVF1 878 aaPredicted RBP18.53■□□□□ 0.56
PDZD11-201ENST00000239666 ORAI2Q96SN7 254 aa18.53■□□□□ 0.56
PDZD11-201ENST00000239666 CFAP70Q5T0N1 1121 aa18.52■□□□□ 0.56
PDZD11-201ENST00000239666 POGKQ9P215 609 aa18.52■□□□□ 0.56
PDZD11-201ENST00000239666 DCAF11Q8TEB1 546 aa18.51■□□□□ 0.55
PDZD11-201ENST00000239666 RXRBP28702 533 aa18.5■□□□□ 0.55
PDZD11-201ENST00000239666 PNPLA6Q8IY17 1366 aa18.5■□□□□ 0.55
PDZD11-201ENST00000239666 LRP6O75581 1613 aa18.49■□□□□ 0.55
PDZD11-201ENST00000239666 PSME1Q06323 249 aa18.49■□□□□ 0.55
PDZD11-201ENST00000239666 EIF3AQ14152 1382 aaKnown RBP18.49■□□□□ 0.55
PDZD11-201ENST00000239666 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
PDZD11-201ENST00000239666 NGLY1Q96IV0 654 aa18.47■□□□□ 0.55
PDZD11-201ENST00000239666 KDM2AQ9Y2K7 1162 aa18.47■□□□□ 0.55
PDZD11-201ENST00000239666 KIF1AQ12756 1690 aa18.47■□□□□ 0.55
PDZD11-201ENST00000239666 FOXO3O43524 673 aa18.46■□□□□ 0.55
PDZD11-201ENST00000239666 REM2Q8IYK8 340 aaPredicted RBP18.46■□□□□ 0.55
PDZD11-201ENST00000239666 DDX17Q92841 729 aaKnown RBP18.46■□□□□ 0.55
PDZD11-201ENST00000239666 PRAM1Q96QH2 718 aa18.46■□□□□ 0.55
PDZD11-201ENST00000239666 AFF2P51816 1311 aa18.46■□□□□ 0.55
PDZD11-201ENST00000239666 C8orf37Q96NL8 207 aa18.45■□□□□ 0.54
PDZD11-201ENST00000239666 FMN2Q9NZ56 1722 aa18.44■□□□□ 0.54
PDZD11-201ENST00000239666 CDK12Q9NYV4 1490 aaPredicted RBP18.44■□□□□ 0.54
PDZD11-201ENST00000239666 SPDYE1Q8NFV5 336 aaPredicted RBP18.43■□□□□ 0.54
PDZD11-201ENST00000239666 RBM6P78332 1123 aaKnown RBP18.42■□□□□ 0.54
PDZD11-201ENST00000239666 QTRT2Q9H974 415 aaKnown RBP18.42■□□□□ 0.54
PDZD11-201ENST00000239666 PHF8Q9UPP1 1060 aa18.42■□□□□ 0.54
PDZD11-201ENST00000239666 PLEKHH1Q9ULM0 1364 aa18.42■□□□□ 0.54
PDZD11-201ENST00000239666 COL22A1Q8NFW1 1626 aaPredicted RBP18.41■□□□□ 0.54
PDZD11-201ENST00000239666 ANKARQ7Z5J8 1434 aa18.41■□□□□ 0.54
PDZD11-201ENST00000239666 NUTM2FA1L443 756 aa18.4■□□□□ 0.54
PDZD11-201ENST00000239666 ADAMTS2O95450 1211 aa18.4■□□□□ 0.54
PDZD11-201ENST00000239666 KRT28Q7Z3Y7 464 aa18.4■□□□□ 0.54
PDZD11-201ENST00000239666 TRAK1Q9UPV9 953 aa18.4■□□□□ 0.54
PDZD11-201ENST00000239666 PXDNQ92626 1479 aa18.39■□□□□ 0.54
PDZD11-201ENST00000239666 FNBP4Q8N3X1 1017 aaPredicted RBP18.39■□□□□ 0.53
PDZD11-201ENST00000239666 TRPC5Q9UL62 973 aaPredicted RBP18.39■□□□□ 0.53
PDZD11-201ENST00000239666 ADGRB1O14514 1584 aa18.38■□□□□ 0.53
PDZD11-201ENST00000239666 USP21Q9UK80 565 aa18.38■□□□□ 0.53
PDZD11-201ENST00000239666 SPATA31A3Q5VYP0 1347 aa18.38■□□□□ 0.53
PDZD11-201ENST00000239666 VASPP50552 380 aaPredicted RBP18.37■□□□□ 0.53
PDZD11-201ENST00000239666 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
PDZD11-201ENST00000239666 ADGRB2O60241 1585 aa18.37■□□□□ 0.53
PDZD11-201ENST00000239666 SBNO1A3KN83 1393 aa18.36■□□□□ 0.53
PDZD11-201ENST00000239666 ARHGEF10O15013 1369 aa18.36■□□□□ 0.53
PDZD11-201ENST00000239666 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
PDZD11-201ENST00000239666 KIAA1210Q9ULL0 1709 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms