RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 DCTN1Q14203 1278 aa15.9■□□□□ 0.14
NEK9-201ENST00000238616 EFCAB2Q5VUJ9 269 aa15.9■□□□□ 0.14
NEK9-201ENST00000238616 SPDYE4A6NLX3 237 aa15.9■□□□□ 0.14
NEK9-201ENST00000238616 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
NEK9-201ENST00000238616 ANKRD30AQ9BXX3 1397 aa15.89■□□□□ 0.13
NEK9-201ENST00000238616 SKOR2Q2VWA4 1001 aaPredicted RBP15.89■□□□□ 0.13
NEK9-201ENST00000238616 HMOX1P09601 288 aa15.88■□□□□ 0.13
NEK9-201ENST00000238616 KIF6Q6ZMV9 814 aa15.88■□□□□ 0.13
NEK9-201ENST00000238616 MAGEC2Q9UBF1 373 aaPredicted RBP15.88■□□□□ 0.13
NEK9-201ENST00000238616 CCDC73Q6ZRK6 1079 aa15.88■□□□□ 0.13
NEK9-201ENST00000238616 NAT10Q9H0A0 1025 aaKnown RBP15.88■□□□□ 0.13
NEK9-201ENST00000238616 PANK3Q9H999 370 aa15.88■□□□□ 0.13
NEK9-201ENST00000238616 COG6Q9Y2V7 657 aa15.88■□□□□ 0.13
NEK9-201ENST00000238616 ACBD3Q9H3P7 528 aa15.87■□□□□ 0.13
NEK9-201ENST00000238616 TSPYL4Q9UJ04 414 aa15.87■□□□□ 0.13
NEK9-201ENST00000238616 EVC2Q86UK5 1308 aa15.87■□□□□ 0.13
NEK9-201ENST00000238616 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
NEK9-201ENST00000238616 CEBPZQ03701 1054 aaKnown RBP15.87■□□□□ 0.13
NEK9-201ENST00000238616 ZKSCAN2Q63HK3 967 aa15.87■□□□□ 0.13
NEK9-201ENST00000238616 PDCL3Q9H2J4 239 aa15.87■□□□□ 0.13
NEK9-201ENST00000238616 STRN4Q9NRL3 753 aa15.87■□□□□ 0.13
NEK9-201ENST00000238616 CENPHQ9H3R5 247 aa15.86■□□□□ 0.13
NEK9-201ENST00000238616 ABCC8Q09428 1581 aa15.86■□□□□ 0.13
NEK9-201ENST00000238616 SMC2O95347 1197 aa15.86■□□□□ 0.13
NEK9-201ENST00000238616 SDF4Q9BRK5 362 aa15.86■□□□□ 0.13
NEK9-201ENST00000238616 FMNL2Q96PY5 1086 aa15.85■□□□□ 0.13
NEK9-201ENST00000238616 NEBLO76041 1014 aa15.85■□□□□ 0.13
NEK9-201ENST00000238616 RAPGEF4Q8WZA2 1011 aa15.85■□□□□ 0.13
NEK9-201ENST00000238616 ARGLU1Q9NWB6 273 aaPredicted RBP15.85■□□□□ 0.13
NEK9-201ENST00000238616 RIPK4P57078 832 aa15.85■□□□□ 0.13
NEK9-201ENST00000238616 SEPT11Q9NVA2 429 aaKnown RBP15.84■□□□□ 0.13
NEK9-201ENST00000238616 MPHOSPH10O00566 681 aaKnown RBP15.84■□□□□ 0.13
NEK9-201ENST00000238616 CRBNQ96SW2 442 aa15.84■□□□□ 0.13
NEK9-201ENST00000238616 SLC3A2P08195 630 aaKnown RBP15.84■□□□□ 0.13
NEK9-201ENST00000238616 NUTM2BA6NNL0 878 aaPredicted RBP15.84■□□□□ 0.13
NEK9-201ENST00000238616 NUTM2EB1AL46 878 aaPredicted RBP15.84■□□□□ 0.13
NEK9-201ENST00000238616 HSP90AB4PQ58FF6 505 aa15.84■□□□□ 0.13
NEK9-201ENST00000238616 CENPQQ7L2Z9 268 aaPredicted RBP15.84■□□□□ 0.13
NEK9-201ENST00000238616 NUTM2AQ8IVF1 878 aaPredicted RBP15.84■□□□□ 0.13
NEK9-201ENST00000238616 SART3Q15020 963 aaKnown RBP15.84■□□□□ 0.13
NEK9-201ENST00000238616 ROCK1Q13464 1354 aa15.83■□□□□ 0.13
NEK9-201ENST00000238616 DNAJC2Q99543 621 aaKnown RBP15.83■□□□□ 0.13
NEK9-201ENST00000238616 AXDND1Q5T1B0 1012 aaPredicted RBP15.83■□□□□ 0.12
NEK9-201ENST00000238616 ERC2O15083 957 aa15.83■□□□□ 0.12
NEK9-201ENST00000238616 HSP90AB3PQ58FF7 597 aa15.83■□□□□ 0.12
NEK9-201ENST00000238616 CYB5RLQ6IPT4 315 aa15.83■□□□□ 0.12
NEK9-201ENST00000238616 TXLNAP40222 546 aa15.83■□□□□ 0.12
NEK9-201ENST00000238616 NLRP2Q9NX02 1062 aa15.83■□□□□ 0.12
NEK9-201ENST00000238616 KIF15Q9NS87 1388 aa15.83■□□□□ 0.12
NEK9-201ENST00000238616 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
NEK9-201ENST00000238616 NINLQ9Y2I6 1382 aa15.82■□□□□ 0.12
NEK9-201ENST00000238616 NLRP13Q86W25 1043 aa15.82■□□□□ 0.12
NEK9-201ENST00000238616 TSPYL1Q9H0U9 437 aa15.81■□□□□ 0.12
NEK9-201ENST00000238616 WASHC2AQ641Q2 1341 aa15.81■□□□□ 0.12
NEK9-201ENST00000238616 CHMP5Q9NZZ3 219 aa15.81■□□□□ 0.12
NEK9-201ENST00000238616 PAXIP1Q6ZW49 1069 aaPredicted RBP15.81■□□□□ 0.12
NEK9-201ENST00000238616 TAX1BP1Q86VP1 789 aa15.81■□□□□ 0.12
NEK9-201ENST00000238616 TBC1D2BQ9UPU7 963 aa15.81■□□□□ 0.12
NEK9-201ENST00000238616 CNNM1Q9NRU3 951 aa15.81■□□□□ 0.12
NEK9-201ENST00000238616 GBP2P32456 591 aaPredicted RBP15.8■□□□□ 0.12
NEK9-201ENST00000238616 INTS3Q68E01 1043 aaKnown RBP15.8■□□□□ 0.12
NEK9-201ENST00000238616 TANGO6Q9C0B7 1094 aa15.8■□□□□ 0.12
NEK9-201ENST00000238616 ERLIN2O94905 339 aa15.8■□□□□ 0.12
NEK9-201ENST00000238616 PIP4K2BP78356 416 aa15.8■□□□□ 0.12
NEK9-201ENST00000238616 RSPH6AQ9H0K4 717 aa15.8■□□□□ 0.12
NEK9-201ENST00000238616 TMEM87AQ8NBN3 555 aa15.79■□□□□ 0.12
NEK9-201ENST00000238616 CCDC144AA2RUR9 1427 aa15.79■□□□□ 0.12
NEK9-201ENST00000238616 SSR1P43307 286 aaKnown RBP15.79■□□□□ 0.12
NEK9-201ENST00000238616 ZSCAN29Q8IWY8 852 aaPredicted RBP15.79■□□□□ 0.12
NEK9-201ENST00000238616 PSMD1Q99460 953 aa15.79■□□□□ 0.12
NEK9-201ENST00000238616 GOLGA6L10A6NI86 522 aa15.79■□□□□ 0.12
NEK9-201ENST00000238616 PHLDB1Q86UU1 1377 aa15.79■□□□□ 0.12
NEK9-201ENST00000238616 SMARCE1Q969G3 411 aa15.79■□□□□ 0.12
NEK9-201ENST00000238616 RAB3GAP2Q9H2M9 1393 aa15.79■□□□□ 0.12
NEK9-201ENST00000238616 GSE1Q14687 1217 aa15.79■□□□□ 0.12
NEK9-201ENST00000238616 LNPKQ9C0E8 428 aa15.79■□□□□ 0.12
NEK9-201ENST00000238616 DEF6Q9H4E7 631 aa15.79■□□□□ 0.12
NEK9-201ENST00000238616 ANKRD18AQ8IVF6 992 aa15.78■□□□□ 0.12
NEK9-201ENST00000238616 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
NEK9-201ENST00000238616 CT47B1P0C2W7 299 aaPredicted RBP15.77■□□□□ 0.12
NEK9-201ENST00000238616 PIBF1Q8WXW3 757 aa15.77■□□□□ 0.12
NEK9-201ENST00000238616 TTC39AQ5SRH9 613 aa15.77■□□□□ 0.12
NEK9-201ENST00000238616 CNTROBQ8N137 903 aa15.77■□□□□ 0.12
NEK9-201ENST00000238616 SPC24Q8NBT2 197 aa15.77■□□□□ 0.12
NEK9-201ENST00000238616 UACAQ9BZF9 1416 aa15.77■□□□□ 0.12
NEK9-201ENST00000238616 E9PSI1 815 aa15.77■□□□□ 0.12
NEK9-201ENST00000238616 FAM177A1Q8N128 213 aaPredicted RBP15.77■□□□□ 0.12
NEK9-201ENST00000238616 SPINK5Q9NQ38 1064 aaPredicted RBP15.77■□□□□ 0.11
NEK9-201ENST00000238616 DIAPH1O60610 1272 aaKnown RBP15.77■□□□□ 0.11
NEK9-201ENST00000238616 FILIP1LQ4L180 1135 aa15.77■□□□□ 0.11
NEK9-201ENST00000238616 DDX19BQ9UMR2 479 aa15.76■□□□□ 0.11
NEK9-201ENST00000238616 HMGN5P82970 282 aaKnown RBP15.76■□□□□ 0.11
NEK9-201ENST00000238616 FSD1Q9BTV5 496 aa15.76■□□□□ 0.11
NEK9-201ENST00000238616 ST20-MTHFSA0A0A6YYL1 179 aa15.76■□□□□ 0.11
NEK9-201ENST00000238616 TRIM5Q9C035 493 aa15.76■□□□□ 0.11
NEK9-201ENST00000238616 KINO60870 393 aaKnown RBP15.75■□□□□ 0.11
NEK9-201ENST00000238616 UBTFL1P0CB47 393 aaPredicted RBP15.75■□□□□ 0.11
NEK9-201ENST00000238616 RNF214Q8ND24 703 aa15.75■□□□□ 0.11
NEK9-201ENST00000238616 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.75■□□□□ 0.11
NEK9-201ENST00000238616 PLCD3Q8N3E9 789 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms