RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 C1orf167Q5SNV9 1468 aa22.28■■□□□ 1.16
APOA1-201ENST00000236850 CDC42BPGQ6DT37 1551 aa22.28■■□□□ 1.16
APOA1-201ENST00000236850 COL16A1Q07092 1604 aaPredicted RBP22.27■■□□□ 1.16
APOA1-201ENST00000236850 POGKQ9P215 609 aa22.26■■□□□ 1.15
APOA1-201ENST00000236850 DLC1Q96QB1 1528 aa22.26■■□□□ 1.15
APOA1-201ENST00000236850 ADGRB1O14514 1584 aa22.24■■□□□ 1.15
APOA1-201ENST00000236850 LRRC59Q96AG4 307 aaKnown RBP22.23■■□□□ 1.15
APOA1-201ENST00000236850 PRAM1Q96QH2 718 aa22.23■■□□□ 1.15
APOA1-201ENST00000236850 NHSL1Q5SYE7 1610 aa22.23■■□□□ 1.15
APOA1-201ENST00000236850 PLEKHH1Q9ULM0 1364 aa22.23■■□□□ 1.15
APOA1-201ENST00000236850 SPATA31A6Q5VVP1 1343 aa22.22■■□□□ 1.15
APOA1-201ENST00000236850 TRAK1Q9UPV9 953 aa22.21■■□□□ 1.15
APOA1-201ENST00000236850 KIAA1210Q9ULL0 1709 aa22.2■■□□□ 1.14
APOA1-201ENST00000236850 ESCO1Q5FWF5 840 aa22.2■■□□□ 1.14
APOA1-201ENST00000236850 ORAI2Q96SN7 254 aa22.2■■□□□ 1.14
APOA1-201ENST00000236850 SHPRHQ149N8 1683 aa22.18■■□□□ 1.14
APOA1-201ENST00000236850 NEUROD1Q13562 356 aa22.18■■□□□ 1.14
APOA1-201ENST00000236850 SIN3AQ96ST3 1273 aa22.18■■□□□ 1.14
APOA1-201ENST00000236850 NPHP3Q7Z494 1330 aa22.17■■□□□ 1.14
APOA1-201ENST00000236850 SAFB2Q14151 953 aaKnown RBP eCLIP22.17■■□□□ 1.14
APOA1-201ENST00000236850 L3MBTL2Q969R5 705 aa22.16■■□□□ 1.14
APOA1-201ENST00000236850 FMN2Q9NZ56 1722 aa22.16■■□□□ 1.14
APOA1-201ENST00000236850 SOS2Q07890 1332 aaPredicted RBP22.14■■□□□ 1.14
APOA1-201ENST00000236850 NUTM2FA1L443 756 aa22.14■■□□□ 1.13
APOA1-201ENST00000236850 EIF3AQ14152 1382 aaKnown RBP22.13■■□□□ 1.13
APOA1-201ENST00000236850 DDX17Q92841 729 aaKnown RBP22.13■■□□□ 1.13
APOA1-201ENST00000236850 MEX3CQ5U5Q3 659 aaKnown RBP22.12■■□□□ 1.13
APOA1-201ENST00000236850 ADGRB2O60241 1585 aa22.11■■□□□ 1.13
APOA1-201ENST00000236850 FOXO3O43524 673 aa22.1■■□□□ 1.13
APOA1-201ENST00000236850 KIF1AQ12756 1690 aa22.1■■□□□ 1.13
APOA1-201ENST00000236850 MINK1Q8N4C8 1332 aaPredicted RBP22.09■■□□□ 1.13
APOA1-201ENST00000236850 ANKARQ7Z5J8 1434 aa22.09■■□□□ 1.13
APOA1-201ENST00000236850 ARHGEF28Q8N1W1 1705 aaKnown RBP22.09■■□□□ 1.13
APOA1-201ENST00000236850 PHF8Q9UPP1 1060 aa22.08■■□□□ 1.13
APOA1-201ENST00000236850 PNPLA6Q8IY17 1366 aa22.08■■□□□ 1.12
APOA1-201ENST00000236850 WASLO00401 505 aaPredicted RBP22.07■■□□□ 1.12
APOA1-201ENST00000236850 NBPF1Q3BBV0 1214 aa22.07■■□□□ 1.12
APOA1-201ENST00000236850 HIRIP3Q9BW71 556 aaPredicted RBP22.07■■□□□ 1.12
APOA1-201ENST00000236850 RGS17Q9UGC6 210 aaPredicted RBP22.07■■□□□ 1.12
APOA1-201ENST00000236850 NUTM2BA6NNL0 878 aaPredicted RBP22.06■■□□□ 1.12
APOA1-201ENST00000236850 NUTM2EB1AL46 878 aaPredicted RBP22.06■■□□□ 1.12
APOA1-201ENST00000236850 NUTM2AQ8IVF1 878 aaPredicted RBP22.06■■□□□ 1.12
APOA1-201ENST00000236850 RGPD8O14715 1765 aaPredicted RBP22.06■■□□□ 1.12
APOA1-201ENST00000236850 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
APOA1-201ENST00000236850 PSME1Q06323 249 aa22.05■■□□□ 1.12
APOA1-201ENST00000236850 LRP6O75581 1613 aa22.03■■□□□ 1.12
APOA1-201ENST00000236850 PXDNQ92626 1479 aa22.03■■□□□ 1.12
APOA1-201ENST00000236850 ZNF772Q68DY9 489 aaPredicted RBP22.02■■□□□ 1.12
APOA1-201ENST00000236850 KRT28Q7Z3Y7 464 aa22.02■■□□□ 1.12
APOA1-201ENST00000236850 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
APOA1-201ENST00000236850 TULP4Q9NRJ4 1543 aa22.01■■□□□ 1.11
APOA1-201ENST00000236850 CENPJQ9HC77 1338 aaPredicted RBP22.01■■□□□ 1.11
APOA1-201ENST00000236850 TRPM1Q7Z4N2 1603 aa22■■□□□ 1.11
APOA1-201ENST00000236850 XPCQ01831 940 aaPredicted RBP22■■□□□ 1.11
APOA1-201ENST00000236850 POTEAQ6S8J7 498 aa22■■□□□ 1.11
APOA1-201ENST00000236850 ROCK2O75116 1388 aaKnown RBP21.99■■□□□ 1.11
APOA1-201ENST00000236850 USP32Q8NFA0 1604 aa21.98■■□□□ 1.11
APOA1-201ENST00000236850 PMFBP1Q8TBY8 1022 aa21.97■■□□□ 1.11
APOA1-201ENST00000236850 CDK19Q9BWU1 502 aa21.97■■□□□ 1.11
APOA1-201ENST00000236850 COL22A1Q8NFW1 1626 aaPredicted RBP21.97■■□□□ 1.11
APOA1-201ENST00000236850 SPATA31A3Q5VYP0 1347 aa21.97■■□□□ 1.11
APOA1-201ENST00000236850 ITSN1Q15811 1721 aa21.96■■□□□ 1.11
APOA1-201ENST00000236850 SBNO1A3KN83 1393 aa21.96■■□□□ 1.11
APOA1-201ENST00000236850 GPRASP1Q5JY77 1395 aa21.96■■□□□ 1.11
APOA1-201ENST00000236850 NUDT16Q96DE0 195 aaKnown RBP21.95■■□□□ 1.1
APOA1-201ENST00000236850 PRR36Q9H6K5 1346 aa21.95■■□□□ 1.1
APOA1-201ENST00000236850 ADAMTS2O95450 1211 aa21.94■■□□□ 1.1
APOA1-201ENST00000236850 NGDNQ8NEJ9 315 aaKnown RBP21.94■■□□□ 1.1
APOA1-201ENST00000236850 C8orf37Q96NL8 207 aa21.94■■□□□ 1.1
APOA1-201ENST00000236850 ARHGEF10O15013 1369 aa21.93■■□□□ 1.1
APOA1-201ENST00000236850 AFF2P51816 1311 aa21.93■■□□□ 1.1
APOA1-201ENST00000236850 TNS3Q68CZ2 1445 aa21.93■■□□□ 1.1
APOA1-201ENST00000236850 NGLY1Q96IV0 654 aa21.93■■□□□ 1.1
APOA1-201ENST00000236850 CCDC61Q9Y6R9 512 aa21.93■■□□□ 1.1
APOA1-201ENST00000236850 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
APOA1-201ENST00000236850 NBPF8Q3BBV2 869 aa21.92■■□□□ 1.1
APOA1-201ENST00000236850 QRICH2Q9H0J4 1663 aa21.91■■□□□ 1.1
APOA1-201ENST00000236850 ATP7BP35670 1465 aa21.9■■□□□ 1.1
APOA1-201ENST00000236850 SRPK2P78362 688 aaKnown RBP21.9■■□□□ 1.1
APOA1-201ENST00000236850 LMOD2Q6P5Q4 547 aa21.89■■□□□ 1.09
APOA1-201ENST00000236850 CARD11Q9BXL7 1154 aa21.89■■□□□ 1.09
APOA1-201ENST00000236850 EVC2Q86UK5 1308 aa21.88■■□□□ 1.09
APOA1-201ENST00000236850 HAP1P54257 671 aaPredicted RBP21.88■■□□□ 1.09
APOA1-201ENST00000236850 RALGAPBQ86X10 1494 aa21.86■■□□□ 1.09
APOA1-201ENST00000236850 PLEKHG3A1L390 1219 aa21.86■■□□□ 1.09
APOA1-201ENST00000236850 RXRBP28702 533 aa21.86■■□□□ 1.09
APOA1-201ENST00000236850 TIMELESSQ9UNS1 1208 aa21.86■■□□□ 1.09
APOA1-201ENST00000236850 MARF1Q9Y4F3 1742 aaKnown RBP21.86■■□□□ 1.09
APOA1-201ENST00000236850 FNBP4Q8N3X1 1017 aaPredicted RBP21.84■■□□□ 1.09
APOA1-201ENST00000236850 QTRT2Q9H974 415 aaKnown RBP21.84■■□□□ 1.09
APOA1-201ENST00000236850 POLR3AO14802 1390 aaPredicted RBP21.84■■□□□ 1.09
APOA1-201ENST00000236850 TRPM3Q9HCF6 1732 aaPredicted RBP21.83■■□□□ 1.09
APOA1-201ENST00000236850 TOPAZ1Q8N9V7 1692 aa21.83■■□□□ 1.09
APOA1-201ENST00000236850 PAK3O75914 559 aaPredicted RBP21.83■■□□□ 1.09
APOA1-201ENST00000236850 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
APOA1-201ENST00000236850 USP21Q9UK80 565 aa21.83■■□□□ 1.09
APOA1-201ENST00000236850 ACEP12821 1306 aa21.81■■□□□ 1.08
APOA1-201ENST00000236850 TRPC5Q9UL62 973 aaPredicted RBP21.81■■□□□ 1.08
APOA1-201ENST00000236850 SBNO2Q9Y2G9 1366 aa21.81■■□□□ 1.08
APOA1-201ENST00000236850 PPIP5K1Q6PFW1 1433 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms