RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 TSR2Q969E8 191 aaKnown RBP12.02□□□□□ -0.49
TRIM23-201ENST00000231524 STK26Q9P289 416 aa12.02□□□□□ -0.49
TRIM23-201ENST00000231524 SPATA31E1Q6ZUB1 1445 aa12.01□□□□□ -0.49
TRIM23-201ENST00000231524 SSFA2P28290 1259 aa12.01□□□□□ -0.49
TRIM23-201ENST00000231524 NKTRP30414 1462 aaKnown RBP12.01□□□□□ -0.49
TRIM23-201ENST00000231524 ERBINQ96RT1 1412 aa12.01□□□□□ -0.49
TRIM23-201ENST00000231524 PLEKHH2Q8IVE3 1493 aa12.01□□□□□ -0.49
TRIM23-201ENST00000231524 WDR62O43379 1518 aa12.01□□□□□ -0.49
TRIM23-201ENST00000231524 PER1O15534 1290 aaPredicted RBP12□□□□□ -0.49
TRIM23-201ENST00000231524 TRAK1Q9UPV9 953 aa12□□□□□ -0.49
TRIM23-201ENST00000231524 PHF14O94880 888 aa12□□□□□ -0.49
TRIM23-201ENST00000231524 EXOSC9Q06265 439 aaKnown RBP12□□□□□ -0.49
TRIM23-201ENST00000231524 SPINK5Q9NQ38 1064 aaPredicted RBP12□□□□□ -0.49
TRIM23-201ENST00000231524 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
TRIM23-201ENST00000231524 SRPK2P78362 688 aaKnown RBP12□□□□□ -0.49
TRIM23-201ENST00000231524 GOLGA6L4A6NEF3 574 aa11.99□□□□□ -0.49
TRIM23-201ENST00000231524 NINLQ9Y2I6 1382 aa11.99□□□□□ -0.49
TRIM23-201ENST00000231524 MTHFSP49914 203 aa11.99□□□□□ -0.49
TRIM23-201ENST00000231524 C9orf84Q5VXU9 1444 aa11.98□□□□□ -0.49
TRIM23-201ENST00000231524 TNNQ9UQP3 1299 aa11.98□□□□□ -0.49
TRIM23-201ENST00000231524 C1orf115Q9H7X2 142 aa11.98□□□□□ -0.49
TRIM23-201ENST00000231524 DISP3Q9P2K9 1392 aa11.98□□□□□ -0.49
TRIM23-201ENST00000231524 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
TRIM23-201ENST00000231524 NOB1Q9ULX3 412 aaKnown RBP11.97□□□□□ -0.49
TRIM23-201ENST00000231524 CDC45O75419 566 aa11.97□□□□□ -0.49
TRIM23-201ENST00000231524 TARBP1Q13395 1621 aaKnown RBP11.97□□□□□ -0.49
TRIM23-201ENST00000231524 CBX1P83916 185 aa11.97□□□□□ -0.49
TRIM23-201ENST00000231524 OFD1O75665 1012 aa11.96□□□□□ -0.49
TRIM23-201ENST00000231524 PBRM1Q86U86 1689 aa11.96□□□□□ -0.49
TRIM23-201ENST00000231524 SYCE3A1L190 88 aa11.96□□□□□ -0.5
TRIM23-201ENST00000231524 RIPK4P57078 832 aa11.96□□□□□ -0.5
TRIM23-201ENST00000231524 NUP153P49790 1475 aaKnown RBP11.96□□□□□ -0.5
TRIM23-201ENST00000231524 TRIM6-TRIM34B2RNG4 842 aa11.95□□□□□ -0.5
TRIM23-201ENST00000231524 CHD1LQ86WJ1 897 aa11.95□□□□□ -0.5
TRIM23-201ENST00000231524 TEX14Q8IWB6 1497 aa11.95□□□□□ -0.5
TRIM23-201ENST00000231524 FSD2A1L4K1 749 aa11.95□□□□□ -0.5
TRIM23-201ENST00000231524 GOLGA6L6A8MZA4 724 aa11.95□□□□□ -0.5
TRIM23-201ENST00000231524 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
TRIM23-201ENST00000231524 RLBP1P12271 317 aa11.95□□□□□ -0.5
TRIM23-201ENST00000231524 ATF7IPQ6VMQ6 1270 aa11.95□□□□□ -0.5
TRIM23-201ENST00000231524 HMGN5P82970 282 aaKnown RBP11.95□□□□□ -0.5
TRIM23-201ENST00000231524 RABEP1Q15276 862 aa11.94□□□□□ -0.5
TRIM23-201ENST00000231524 BAG4O95429 457 aaKnown RBP11.94□□□□□ -0.5
TRIM23-201ENST00000231524 WDR63Q8IWG1 891 aa11.94□□□□□ -0.5
TRIM23-201ENST00000231524 SCAPERQ9BY12 1400 aa11.94□□□□□ -0.5
TRIM23-201ENST00000231524 KIF16BQ96L93 1317 aa11.94□□□□□ -0.5
TRIM23-201ENST00000231524 REC8O95072 547 aa11.94□□□□□ -0.5
TRIM23-201ENST00000231524 SASS6Q6UVJ0 657 aa11.94□□□□□ -0.5
TRIM23-201ENST00000231524 CAMSAP2Q08AD1 1489 aa11.93□□□□□ -0.5
TRIM23-201ENST00000231524 KLHL40Q2TBA0 621 aa11.93□□□□□ -0.5
TRIM23-201ENST00000231524 TSPY26PQ9H489 355 aa11.93□□□□□ -0.5
TRIM23-201ENST00000231524 ANTXR1Q9H6X2 564 aa11.93□□□□□ -0.5
TRIM23-201ENST00000231524 ATP10BO94823 1461 aa11.93□□□□□ -0.5
TRIM23-201ENST00000231524 MBD3O95983 291 aa11.93□□□□□ -0.5
TRIM23-201ENST00000231524 INTS3Q68E01 1043 aaKnown RBP11.93□□□□□ -0.5
TRIM23-201ENST00000231524 TMEM57Q8N5G2 664 aa11.93□□□□□ -0.5
TRIM23-201ENST00000231524 ZNF592Q92610 1267 aa11.93□□□□□ -0.5
TRIM23-201ENST00000231524 CFAP43Q8NDM7 1665 aa11.92□□□□□ -0.5
TRIM23-201ENST00000231524 GAS2L3Q86XJ1 694 aa11.92□□□□□ -0.5
TRIM23-201ENST00000231524 KCNJ4P48050 445 aa11.92□□□□□ -0.5
TRIM23-201ENST00000231524 ZRSR1Q15695 479 aaKnown RBP11.92□□□□□ -0.5
TRIM23-201ENST00000231524 RBM42Q9BTD8 480 aaKnown RBP11.92□□□□□ -0.5
TRIM23-201ENST00000231524 RBM27Q9P2N5 1060 aaKnown RBP11.92□□□□□ -0.5
TRIM23-201ENST00000231524 UGGT2Q9NYU1 1516 aa11.92□□□□□ -0.5
TRIM23-201ENST00000231524 RAPGEF6Q8TEU7 1601 aa11.92□□□□□ -0.5
TRIM23-201ENST00000231524 CFAP70Q5T0N1 1121 aa11.92□□□□□ -0.5
TRIM23-201ENST00000231524 RALGAPBQ86X10 1494 aa11.92□□□□□ -0.5
TRIM23-201ENST00000231524 KIAA0556O60303 1618 aa11.92□□□□□ -0.5
TRIM23-201ENST00000231524 DYNC1I1O14576 645 aa11.91□□□□□ -0.5
TRIM23-201ENST00000231524 NEK4P51957 841 aa11.91□□□□□ -0.5
TRIM23-201ENST00000231524 DIAPH3Q9NSV4 1193 aa11.91□□□□□ -0.5
TRIM23-201ENST00000231524 CHMP3Q9Y3E7 222 aa11.91□□□□□ -0.5
TRIM23-201ENST00000231524 DISP1Q96F81 1524 aa11.91□□□□□ -0.5
TRIM23-201ENST00000231524 TNNT3P45378 269 aaPredicted RBP11.91□□□□□ -0.5
TRIM23-201ENST00000231524 RILPL2Q969X0 211 aa11.91□□□□□ -0.5
TRIM23-201ENST00000231524 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
TRIM23-201ENST00000231524 SLC4A10Q6U841 1118 aa11.91□□□□□ -0.5
TRIM23-201ENST00000231524 SLC12A5Q9H2X9 1139 aa11.91□□□□□ -0.5
TRIM23-201ENST00000231524 SSH1Q8WYL5 1049 aa11.9□□□□□ -0.5
TRIM23-201ENST00000231524 TESK2Q96S53 571 aa11.9□□□□□ -0.5
TRIM23-201ENST00000231524 ZSCAN23Q3MJ62 389 aa11.9□□□□□ -0.5
TRIM23-201ENST00000231524 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
TRIM23-201ENST00000231524 USP19O94966 1318 aa11.9□□□□□ -0.51
TRIM23-201ENST00000231524 RAB3GAP1Q15042 981 aa11.89□□□□□ -0.51
TRIM23-201ENST00000231524 C14orf37Q86TY3 774 aa11.89□□□□□ -0.51
TRIM23-201ENST00000231524 TRIM27P14373 513 aa11.89□□□□□ -0.51
TRIM23-201ENST00000231524 GPATCH8Q9UKJ3 1502 aaKnown RBP11.89□□□□□ -0.51
TRIM23-201ENST00000231524 CWC22Q9HCG8 908 aaKnown RBP11.89□□□□□ -0.51
TRIM23-201ENST00000231524 ANO2Q9NQ90 1003 aa11.89□□□□□ -0.51
TRIM23-201ENST00000231524 GCC1Q96CN9 775 aa11.89□□□□□ -0.51
TRIM23-201ENST00000231524 ERBB4Q15303 1308 aa11.88□□□□□ -0.51
TRIM23-201ENST00000231524 HMMRO75330 724 aa11.88□□□□□ -0.51
TRIM23-201ENST00000231524 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
TRIM23-201ENST00000231524 SMC5Q8IY18 1101 aa11.88□□□□□ -0.51
TRIM23-201ENST00000231524 SPC24Q8NBT2 197 aa11.88□□□□□ -0.51
TRIM23-201ENST00000231524 ZKSCAN5Q9Y2L8 839 aa11.88□□□□□ -0.51
TRIM23-201ENST00000231524 PDCL2Q8N4E4 241 aa11.88□□□□□ -0.51
TRIM23-201ENST00000231524 IFT57Q9NWB7 429 aa11.88□□□□□ -0.51
TRIM23-201ENST00000231524 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
TRIM23-201ENST00000231524 GAS2L2Q8NHY3 880 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms