RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 ST20-MTHFSA0A0A6YYL1 179 aa10.57□□□□□ -0.72
SPARC-201ENST00000231061 NBPF20Q3BBV1 942 aa10.57□□□□□ -0.72
SPARC-201ENST00000231061 EVI5LQ96CN4 794 aa10.57□□□□□ -0.72
SPARC-201ENST00000231061 ADGRL2O95490 1459 aa10.57□□□□□ -0.72
SPARC-201ENST00000231061 FOXD4Q12950 439 aaPredicted RBP10.57□□□□□ -0.72
SPARC-201ENST00000231061 MBD5Q9P267 1494 aa10.57□□□□□ -0.72
SPARC-201ENST00000231061 TMCO4Q5TGY1 634 aa10.56□□□□□ -0.72
SPARC-201ENST00000231061 KIF15Q9NS87 1388 aa10.56□□□□□ -0.72
SPARC-201ENST00000231061 ATL2Q8NHH9 583 aa10.56□□□□□ -0.72
SPARC-201ENST00000231061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.56□□□□□ -0.72
SPARC-201ENST00000231061 GPBP1L1Q9HC44 474 aaPredicted RBP10.56□□□□□ -0.72
SPARC-201ENST00000231061 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.56□□□□□ -0.72
SPARC-201ENST00000231061 HSP90AB3PQ58FF7 597 aa10.55□□□□□ -0.72
SPARC-201ENST00000231061 RBM26Q5T8P6 1007 aaKnown RBP10.55□□□□□ -0.72
SPARC-201ENST00000231061 SMG6Q86US8 1419 aaKnown RBP10.55□□□□□ -0.72
SPARC-201ENST00000231061 ROCK2O75116 1388 aaKnown RBP10.55□□□□□ -0.72
SPARC-201ENST00000231061 NPM3O75607 178 aaKnown RBP10.55□□□□□ -0.72
SPARC-201ENST00000231061 GZF1Q9H116 711 aaPredicted RBP10.55□□□□□ -0.72
SPARC-201ENST00000231061 BCORL1Q5H9F3 1711 aa10.54□□□□□ -0.72
SPARC-201ENST00000231061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.54□□□□□ -0.72
SPARC-201ENST00000231061 ADRA2BP18089 450 aa10.54□□□□□ -0.72
SPARC-201ENST00000231061 SMAP1Q8IYB5 467 aaPredicted RBP10.54□□□□□ -0.72
SPARC-201ENST00000231061 RRAGDQ9NQL2 400 aaPredicted RBP10.54□□□□□ -0.72
SPARC-201ENST00000231061 TCERG1O14776 1098 aaKnown RBP10.54□□□□□ -0.72
SPARC-201ENST00000231061 DHX16O60231 1041 aaKnown RBP10.54□□□□□ -0.72
SPARC-201ENST00000231061 CCDC96Q2M329 555 aa10.54□□□□□ -0.72
SPARC-201ENST00000231061 RNF217Q8TC41 542 aa10.54□□□□□ -0.72
SPARC-201ENST00000231061 CREBRFQ8IUR6 639 aa10.53□□□□□ -0.72
SPARC-201ENST00000231061 RALGAPBQ86X10 1494 aa10.53□□□□□ -0.72
SPARC-201ENST00000231061 CASC1Q6TDU7 716 aa10.53□□□□□ -0.72
SPARC-201ENST00000231061 PNISRQ8TF01 805 aaKnown RBP10.53□□□□□ -0.72
SPARC-201ENST00000231061 ATP10BO94823 1461 aa10.53□□□□□ -0.72
SPARC-201ENST00000231061 PEX14O75381 377 aa10.53□□□□□ -0.72
SPARC-201ENST00000231061 CROCC2H7BZ55 1655 aa10.52□□□□□ -0.72
SPARC-201ENST00000231061 POLR1AO95602 1720 aaPredicted RBP10.52□□□□□ -0.73
SPARC-201ENST00000231061 FOSBP53539 338 aa10.52□□□□□ -0.73
SPARC-201ENST00000231061 NEUROD2Q15784 382 aa10.52□□□□□ -0.73
SPARC-201ENST00000231061 KDM5CP41229 1560 aa10.52□□□□□ -0.73
SPARC-201ENST00000231061 ADCY10Q96PN6 1610 aa10.52□□□□□ -0.73
SPARC-201ENST00000231061 RBM27Q9P2N5 1060 aaKnown RBP10.51□□□□□ -0.73
SPARC-201ENST00000231061 NUP160Q12769 1436 aa10.51□□□□□ -0.73
SPARC-201ENST00000231061 MYBBP1AQ9BQG0 1328 aaKnown RBP10.51□□□□□ -0.73
SPARC-201ENST00000231061 UHRF1BP1Q6BDS2 1440 aa10.5□□□□□ -0.73
SPARC-201ENST00000231061 GSE1Q14687 1217 aa10.5□□□□□ -0.73
SPARC-201ENST00000231061 ABCC10Q5T3U5 1492 aa10.5□□□□□ -0.73
SPARC-201ENST00000231061 SHANK2Q9UPX8 1470 aa10.5□□□□□ -0.73
SPARC-201ENST00000231061 PTPRGP23470 1445 aa10.5□□□□□ -0.73
SPARC-201ENST00000231061 MAP2K1Q02750 393 aaPredicted RBP10.49□□□□□ -0.73
SPARC-201ENST00000231061 LMOD3Q0VAK6 560 aa10.49□□□□□ -0.73
SPARC-201ENST00000231061 TSHZ1Q6ZSZ6 1077 aa10.49□□□□□ -0.73
SPARC-201ENST00000231061 GET4Q7L5D6 327 aaPredicted RBP10.49□□□□□ -0.73
SPARC-201ENST00000231061 OTUD6BQ8N6M0 293 aa10.49□□□□□ -0.73
SPARC-201ENST00000231061 CCDC144AA2RUR9 1427 aa10.49□□□□□ -0.73
SPARC-201ENST00000231061 TERF2IPQ9NYB0 399 aa10.48□□□□□ -0.73
SPARC-201ENST00000231061 ZBTB47Q9UFB7 747 aaPredicted RBP10.48□□□□□ -0.73
SPARC-201ENST00000231061 CDC42BPAQ5VT25 1732 aa10.48□□□□□ -0.73
SPARC-201ENST00000231061 MARCH6O60337 910 aa10.48□□□□□ -0.73
SPARC-201ENST00000231061 MLECQ14165 292 aa10.48□□□□□ -0.73
SPARC-201ENST00000231061 TRIM44Q96DX7 344 aaPredicted RBP10.48□□□□□ -0.73
SPARC-201ENST00000231061 ARHGEF12Q9NZN5 1544 aa10.48□□□□□ -0.73
SPARC-201ENST00000231061 ABCA8O94911 1581 aa10.48□□□□□ -0.73
SPARC-201ENST00000231061 BRD4O60885 1362 aaPredicted RBP10.47□□□□□ -0.73
SPARC-201ENST00000231061 KTN1Q86UP2 1357 aaKnown RBP10.47□□□□□ -0.73
SPARC-201ENST00000231061 CCDC141Q6ZP82 1450 aa10.47□□□□□ -0.73
SPARC-201ENST00000231061 SSFA2P28290 1259 aa10.46□□□□□ -0.73
SPARC-201ENST00000231061 ANP32AP39687 249 aaKnown RBP10.46□□□□□ -0.73
SPARC-201ENST00000231061 NBPF9Q3BBW0 867 aa10.46□□□□□ -0.73
SPARC-201ENST00000231061 CEP120Q8N960 986 aa10.46□□□□□ -0.73
SPARC-201ENST00000231061 CALR3Q96L12 384 aaKnown RBP10.46□□□□□ -0.73
SPARC-201ENST00000231061 NLRP13Q86W25 1043 aa10.46□□□□□ -0.74
SPARC-201ENST00000231061 CCDC82Q8N4S0 544 aa10.46□□□□□ -0.74
SPARC-201ENST00000231061 CGNQ9P2M7 1197 aaKnown RBP10.46□□□□□ -0.74
SPARC-201ENST00000231061 GOLGA6CA6NDK9 693 aa10.45□□□□□ -0.74
SPARC-201ENST00000231061 GOLGA6BA6NDN3 693 aa10.45□□□□□ -0.74
SPARC-201ENST00000231061 GOLGA6DP0CG33 693 aa10.45□□□□□ -0.74
SPARC-201ENST00000231061 GOLGA6AQ9NYA3 693 aa10.45□□□□□ -0.74
SPARC-201ENST00000231061 NUTM2GQ5VZR2 741 aa10.45□□□□□ -0.74
SPARC-201ENST00000231061 TAF3Q5VWG9 929 aa10.45□□□□□ -0.74
SPARC-201ENST00000231061 FAM135AQ9P2D6 1515 aa10.45□□□□□ -0.74
SPARC-201ENST00000231061 RRP1P56182 461 aaKnown RBP10.44□□□□□ -0.74
SPARC-201ENST00000231061 ERBB3P21860 1342 aa10.44□□□□□ -0.74
SPARC-201ENST00000231061 RNF123Q5XPI4 1314 aa10.44□□□□□ -0.74
SPARC-201ENST00000231061 KIF4AO95239 1232 aa10.44□□□□□ -0.74
SPARC-201ENST00000231061 DMTNQ08495 405 aa10.44□□□□□ -0.74
SPARC-201ENST00000231061 RCAN3Q9UKA8 241 aa10.44□□□□□ -0.74
SPARC-201ENST00000231061 KDM5DQ9BY66 1539 aa10.44□□□□□ -0.74
SPARC-201ENST00000231061 CCDC97Q96F63 343 aaPredicted RBP10.44□□□□□ -0.74
SPARC-201ENST00000231061 CCDC125Q86Z20 511 aa10.43□□□□□ -0.74
SPARC-201ENST00000231061 EXOC6Q8TAG9 804 aa10.43□□□□□ -0.74
SPARC-201ENST00000231061 MYH16Q9H6N6 1097 aa10.43□□□□□ -0.74
SPARC-201ENST00000231061 ARHGAP5Q13017 1502 aa10.43□□□□□ -0.74
SPARC-201ENST00000231061 SCP2P22307 547 aa10.43□□□□□ -0.74
SPARC-201ENST00000231061 NME8Q8N427 588 aa10.43□□□□□ -0.74
SPARC-201ENST00000231061 LRPPRCP42704 1394 aaKnown RBP10.43□□□□□ -0.74
SPARC-201ENST00000231061 IPO8O15397 1037 aaKnown RBP10.43□□□□□ -0.74
SPARC-201ENST00000231061 UTP14CQ5TAP6 766 aaKnown RBP10.43□□□□□ -0.74
SPARC-201ENST00000231061 PROCA1Q8NCQ7 364 aaPredicted RBP10.43□□□□□ -0.74
SPARC-201ENST00000231061 PRAG1Q86YV5 1406 aa10.42□□□□□ -0.74
SPARC-201ENST00000231061 TPD52L2O43399 206 aaKnown RBP10.42□□□□□ -0.74
SPARC-201ENST00000231061 SSR1P43307 286 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms