RNA–Protein interactions for RNA: ENST00000223122.3

C1GALT1-201, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1GALT1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-201ENST00000223122 AFAP1Q8N556 730 aa9.93□□□□□ -0.82
C1GALT1-201ENST00000223122 SMC3Q9UQE7 1217 aa9.93□□□□□ -0.82
C1GALT1-201ENST00000223122 ANO8Q9HCE9 1232 aaPredicted RBP9.93□□□□□ -0.82
C1GALT1-201ENST00000223122 KIF3AQ9Y496 699 aa9.93□□□□□ -0.82
C1GALT1-201ENST00000223122 CCDC27Q2M243 656 aa9.93□□□□□ -0.82
C1GALT1-201ENST00000223122 RNF214Q8ND24 703 aa9.93□□□□□ -0.82
C1GALT1-201ENST00000223122 TNNT3P45378 269 aaPredicted RBP9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 AIMP1Q12904 312 aaKnown RBP9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 KDM4AO75164 1064 aa9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 ZKSCAN1P17029 563 aaPredicted RBP9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 FAM43AQ8N2R8 423 aa9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 GOLGA6L1Q8N7Z2 621 aa9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 ZNF428Q96B54 188 aa9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 GRIN2BQ13224 1484 aa9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 NUCB2P80303 420 aa9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 TTC5Q8N0Z6 440 aa9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 C11orf95C9JLR9 678 aaPredicted RBP9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 PTPN23Q9H3S7 1636 aa9.92□□□□□ -0.82
C1GALT1-201ENST00000223122 PRKAR2BP31323 418 aa9.91□□□□□ -0.82
C1GALT1-201ENST00000223122 NASPP49321 788 aaPredicted RBP9.91□□□□□ -0.82
C1GALT1-201ENST00000223122 NEXNQ0ZGT2 675 aa9.91□□□□□ -0.82
C1GALT1-201ENST00000223122 CAVIN1Q6NZI2 390 aaKnown RBP9.91□□□□□ -0.82
C1GALT1-201ENST00000223122 R3HCC1Q9Y3T6 440 aaKnown RBP9.91□□□□□ -0.82
C1GALT1-201ENST00000223122 CYB5RLQ6IPT4 315 aa9.91□□□□□ -0.82
C1GALT1-201ENST00000223122 CCDC34Q96HJ3 373 aa9.91□□□□□ -0.82
C1GALT1-201ENST00000223122 G3BP1Q13283 466 aaKnown RBP eCLIP9.91□□□□□ -0.82
C1GALT1-201ENST00000223122 SLC12A5Q9H2X9 1139 aa9.91□□□□□ -0.82
C1GALT1-201ENST00000223122 APPP05067 770 aa9.9□□□□□ -0.82
C1GALT1-201ENST00000223122 TPM3P06753 285 aa9.9□□□□□ -0.82
C1GALT1-201ENST00000223122 VPS53Q5VIR6 699 aa9.9□□□□□ -0.82
C1GALT1-201ENST00000223122 TOPBP1Q92547 1522 aa9.9□□□□□ -0.82
C1GALT1-201ENST00000223122 ZNF771Q7L3S4 317 aaPredicted RBP9.9□□□□□ -0.82
C1GALT1-201ENST00000223122 MRE11P49959 708 aa9.9□□□□□ -0.83
C1GALT1-201ENST00000223122 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.9□□□□□ -0.83
C1GALT1-201ENST00000223122 SYNJ2O15056 1496 aa9.89□□□□□ -0.83
C1GALT1-201ENST00000223122 MAP4K4O95819 1239 aaPredicted RBP9.89□□□□□ -0.83
C1GALT1-201ENST00000223122 PSME1Q06323 249 aa9.89□□□□□ -0.83
C1GALT1-201ENST00000223122 PRPF40AO75400 957 aaKnown RBP9.89□□□□□ -0.83
C1GALT1-201ENST00000223122 NAIPQ13075 1403 aa9.89□□□□□ -0.83
C1GALT1-201ENST00000223122 GTF2E1P29083 439 aaPredicted RBP9.89□□□□□ -0.83
C1GALT1-201ENST00000223122 POLA1P09884 1462 aaPredicted RBP9.89□□□□□ -0.83
C1GALT1-201ENST00000223122 UBTFL1P0CB47 393 aaPredicted RBP9.89□□□□□ -0.83
C1GALT1-201ENST00000223122 PRAM1Q96QH2 718 aa9.89□□□□□ -0.83
C1GALT1-201ENST00000223122 A0A0U1RQG5 324 aaPredicted RBP9.88□□□□□ -0.83
C1GALT1-201ENST00000223122 EVA1CP58658 441 aa9.88□□□□□ -0.83
C1GALT1-201ENST00000223122 MARCH6O60337 910 aa9.88□□□□□ -0.83
C1GALT1-201ENST00000223122 AKAP17AQ02040 695 aaKnown RBP9.88□□□□□ -0.83
C1GALT1-201ENST00000223122 TWISTNBQ3B726 338 aaPredicted RBP9.88□□□□□ -0.83
C1GALT1-201ENST00000223122 SASS6Q6UVJ0 657 aa9.88□□□□□ -0.83
C1GALT1-201ENST00000223122 C20orf194Q5TEA3 1177 aa9.88□□□□□ -0.83
C1GALT1-201ENST00000223122 G3V3G9 751 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 DCAF8Q5TAQ9 597 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 RNF20Q5VTR2 975 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 SYNE3Q6ZMZ3 975 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 RIC3Q7Z5B4 369 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 IFT57Q9NWB7 429 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 AAMPQ13685 434 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 TRIM29Q14134 588 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 SNAPC4Q5SXM2 1469 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 PDE3AQ14432 1141 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 NFXL1Q6ZNB6 911 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 CC2D2AQ9P2K1 1620 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 CPLX1O14810 134 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 DDX58O95786 925 aaKnown RBP9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 NEUROD6Q96NK8 337 aa9.87□□□□□ -0.83
C1GALT1-201ENST00000223122 ERC2O15083 957 aa9.86□□□□□ -0.83
C1GALT1-201ENST00000223122 NINLQ9Y2I6 1382 aa9.86□□□□□ -0.83
C1GALT1-201ENST00000223122 NEK4P51957 841 aa9.86□□□□□ -0.83
C1GALT1-201ENST00000223122 CCDC39Q9UFE4 941 aa9.86□□□□□ -0.83
C1GALT1-201ENST00000223122 HOMER1Q86YM7 354 aa9.86□□□□□ -0.83
C1GALT1-201ENST00000223122 CNTROBQ8N137 903 aa9.86□□□□□ -0.83
C1GALT1-201ENST00000223122 MVPQ14764 893 aaKnown RBP9.86□□□□□ -0.83
C1GALT1-201ENST00000223122 SYTL4Q96C24 671 aaPredicted RBP9.86□□□□□ -0.83
C1GALT1-201ENST00000223122 EPRSP07814 1512 aaKnown RBP9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 MPNDQ8N594 471 aa9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 CDK19Q9BWU1 502 aa9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 RBM10P98175 930 aaKnown RBP9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 PCMTD1Q96MG8 357 aaPredicted RBP9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 TMX4Q9H1E5 349 aaPredicted RBP9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 TROQ12816 1431 aaPredicted RBP9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 RAD21O60216 631 aa9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 SURF6O75683 361 aaKnown RBP9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 SCAPERQ9BY12 1400 aa9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 FAM69CQ0P6D2 419 aa9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 TSPY26PQ9H489 355 aa9.85□□□□□ -0.83
C1GALT1-201ENST00000223122 DNAJC2Q99543 621 aaKnown RBP9.84□□□□□ -0.83
C1GALT1-201ENST00000223122 FSD1Q9BTV5 496 aa9.84□□□□□ -0.83
C1GALT1-201ENST00000223122 DNMBPQ6XZF7 1577 aa9.84□□□□□ -0.83
C1GALT1-201ENST00000223122 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
C1GALT1-201ENST00000223122 GCC1Q96CN9 775 aa9.84□□□□□ -0.83
C1GALT1-201ENST00000223122 CABP1Q9NZU7 370 aa9.84□□□□□ -0.83
C1GALT1-201ENST00000223122 CAMSAP2Q08AD1 1489 aa9.84□□□□□ -0.83
C1GALT1-201ENST00000223122 TXNDC2Q86VQ3 553 aa9.84□□□□□ -0.83
C1GALT1-201ENST00000223122 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
C1GALT1-201ENST00000223122 SLC4A2P04920 1241 aa9.83□□□□□ -0.84
C1GALT1-201ENST00000223122 SLFN5Q08AF3 891 aa9.83□□□□□ -0.84
C1GALT1-201ENST00000223122 WASHC4Q2M389 1173 aa9.83□□□□□ -0.84
C1GALT1-201ENST00000223122 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.83□□□□□ -0.84
C1GALT1-201ENST00000223122 CCDC30Q5VVM6 783 aa9.83□□□□□ -0.84
C1GALT1-201ENST00000223122 CHD1LQ86WJ1 897 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms