RNA–Protein interactions for RNA: ENST00000221784.8

PDCD5-201, Transcript of programmed cell death 5, humanhuman

TSL 3

Gene PDCD5, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-201ENST00000221784 PNPLA6Q8IY17 1366 aa20.37■□□□□ 0.85
PDCD5-201ENST00000221784 ESCO1Q5FWF5 840 aa20.37■□□□□ 0.85
PDCD5-201ENST00000221784 NHSL1Q5SYE7 1610 aa20.36■□□□□ 0.85
PDCD5-201ENST00000221784 TECPR2O15040 1411 aa20.36■□□□□ 0.85
PDCD5-201ENST00000221784 SIRT1Q96EB6 747 aa20.35■□□□□ 0.85
PDCD5-201ENST00000221784 AFF2P51816 1311 aa20.34■□□□□ 0.85
PDCD5-201ENST00000221784 HRCP23327 699 aa20.34■□□□□ 0.85
PDCD5-201ENST00000221784 RXRBP28702 533 aa20.34■□□□□ 0.85
PDCD5-201ENST00000221784 CFAP70Q5T0N1 1121 aa20.34■□□□□ 0.85
PDCD5-201ENST00000221784 C8orf37Q96NL8 207 aa20.34■□□□□ 0.85
PDCD5-201ENST00000221784 YTHDC2Q9H6S0 1430 aaKnown RBP20.33■□□□□ 0.84
PDCD5-201ENST00000221784 PLEKHH1Q9ULM0 1364 aa20.33■□□□□ 0.84
PDCD5-201ENST00000221784 NPHP3Q7Z494 1330 aa20.32■□□□□ 0.84
PDCD5-201ENST00000221784 NUTM2FA1L443 756 aa20.32■□□□□ 0.84
PDCD5-201ENST00000221784 DHX57Q6P158 1386 aaKnown RBP20.32■□□□□ 0.84
PDCD5-201ENST00000221784 FOXO3O43524 673 aa20.31■□□□□ 0.84
PDCD5-201ENST00000221784 ADAMTS2O95450 1211 aa20.31■□□□□ 0.84
PDCD5-201ENST00000221784 NGLY1Q96IV0 654 aa20.3■□□□□ 0.84
PDCD5-201ENST00000221784 CDC42BPGQ6DT37 1551 aa20.29■□□□□ 0.84
PDCD5-201ENST00000221784 IFT172Q9UG01 1749 aa20.28■□□□□ 0.84
PDCD5-201ENST00000221784 QTRT2Q9H974 415 aaKnown RBP20.28■□□□□ 0.84
PDCD5-201ENST00000221784 MYOM2P54296 1465 aa20.28■□□□□ 0.84
PDCD5-201ENST00000221784 NRXN1Q9ULB1 1477 aa20.28■□□□□ 0.84
PDCD5-201ENST00000221784 XPCQ01831 940 aaPredicted RBP20.27■□□□□ 0.84
PDCD5-201ENST00000221784 LAMC1P11047 1609 aa20.27■□□□□ 0.83
PDCD5-201ENST00000221784 KDM2AQ9Y2K7 1162 aa20.26■□□□□ 0.83
PDCD5-201ENST00000221784 DCAF11Q8TEB1 546 aa20.25■□□□□ 0.83
PDCD5-201ENST00000221784 PRAM1Q96QH2 718 aa20.25■□□□□ 0.83
PDCD5-201ENST00000221784 RBM6P78332 1123 aaKnown RBP20.24■□□□□ 0.83
PDCD5-201ENST00000221784 SAFB2Q14151 953 aaKnown RBP eCLIP20.24■□□□□ 0.83
PDCD5-201ENST00000221784 STAC3Q96MF2 364 aa20.24■□□□□ 0.83
PDCD5-201ENST00000221784 POGKQ9P215 609 aa20.24■□□□□ 0.83
PDCD5-201ENST00000221784 USP21Q9UK80 565 aa20.22■□□□□ 0.83
PDCD5-201ENST00000221784 FNBP4Q8N3X1 1017 aaPredicted RBP20.21■□□□□ 0.83
PDCD5-201ENST00000221784 PXDNQ92626 1479 aa20.2■□□□□ 0.82
PDCD5-201ENST00000221784 CDK12Q9NYV4 1490 aaPredicted RBP20.2■□□□□ 0.82
PDCD5-201ENST00000221784 KNDC1Q76NI1 1749 aa20.2■□□□□ 0.82
PDCD5-201ENST00000221784 KRT28Q7Z3Y7 464 aa20.2■□□□□ 0.82
PDCD5-201ENST00000221784 UPF1Q92900 1129 aaKnown RBP eCLIP20.2■□□□□ 0.82
PDCD5-201ENST00000221784 TRAK1Q9UPV9 953 aa20.2■□□□□ 0.82
PDCD5-201ENST00000221784 PHF8Q9UPP1 1060 aa20.19■□□□□ 0.82
PDCD5-201ENST00000221784 TRPC5Q9UL62 973 aaPredicted RBP20.18■□□□□ 0.82
PDCD5-201ENST00000221784 SPATA31A3Q5VYP0 1347 aa20.18■□□□□ 0.82
PDCD5-201ENST00000221784 PSME1Q06323 249 aa20.17■□□□□ 0.82
PDCD5-201ENST00000221784 DLC1Q96QB1 1528 aa20.14■□□□□ 0.81
PDCD5-201ENST00000221784 COL22A1Q8NFW1 1626 aaPredicted RBP20.13■□□□□ 0.81
PDCD5-201ENST00000221784 HIRIP3Q9BW71 556 aaPredicted RBP20.13■□□□□ 0.81
PDCD5-201ENST00000221784 FMN2Q9NZ56 1722 aa20.13■□□□□ 0.81
PDCD5-201ENST00000221784 ADGRB1O14514 1584 aa20.12■□□□□ 0.81
PDCD5-201ENST00000221784 RGS12O14924 1447 aa20.12■□□□□ 0.81
PDCD5-201ENST00000221784 MINK1Q8N4C8 1332 aaPredicted RBP20.12■□□□□ 0.81
PDCD5-201ENST00000221784 PMFBP1Q8TBY8 1022 aa20.12■□□□□ 0.81
PDCD5-201ENST00000221784 ANKARQ7Z5J8 1434 aa20.1■□□□□ 0.81
PDCD5-201ENST00000221784 WASLO00401 505 aaPredicted RBP20.09■□□□□ 0.81
PDCD5-201ENST00000221784 HAP1P54257 671 aaPredicted RBP20.09■□□□□ 0.81
PDCD5-201ENST00000221784 LMOD2Q6P5Q4 547 aa20.09■□□□□ 0.81
PDCD5-201ENST00000221784 ATRNO75882 1429 aa20.09■□□□□ 0.81
PDCD5-201ENST00000221784 SBNO1A3KN83 1393 aa20.08■□□□□ 0.81
PDCD5-201ENST00000221784 KIF1AQ12756 1690 aa20.08■□□□□ 0.81
PDCD5-201ENST00000221784 BCL9LQ86UU0 1499 aa20.07■□□□□ 0.8
PDCD5-201ENST00000221784 CABLES1Q8TDN4 633 aa20.07■□□□□ 0.8
PDCD5-201ENST00000221784 TNS3Q68CZ2 1445 aa20.07■□□□□ 0.8
PDCD5-201ENST00000221784 EIF3AQ14152 1382 aaKnown RBP20.07■□□□□ 0.8
PDCD5-201ENST00000221784 PLEKHG5O94827 1062 aa20.06■□□□□ 0.8
PDCD5-201ENST00000221784 UNC5CLQ8IV45 518 aa20.06■□□□□ 0.8
PDCD5-201ENST00000221784 GJD4Q96KN9 370 aaPredicted RBP20.06■□□□□ 0.8
PDCD5-201ENST00000221784 ARHGEF10O15013 1369 aa20.05■□□□□ 0.8
PDCD5-201ENST00000221784 PRR36Q9H6K5 1346 aa20.04■□□□□ 0.8
PDCD5-201ENST00000221784 GPRASP1Q5JY77 1395 aa20.03■□□□□ 0.8
PDCD5-201ENST00000221784 NGDNQ8NEJ9 315 aaKnown RBP20.02■□□□□ 0.8
PDCD5-201ENST00000221784 ADGRB2O60241 1585 aa20.02■□□□□ 0.8
PDCD5-201ENST00000221784 ATAD2Q6PL18 1390 aa20.01■□□□□ 0.79
PDCD5-201ENST00000221784 SLIT2O94813 1529 aa20.01■□□□□ 0.79
PDCD5-201ENST00000221784 NUDT16Q96DE0 195 aaKnown RBP20■□□□□ 0.79
PDCD5-201ENST00000221784 RGPD8O14715 1765 aaPredicted RBP19.99■□□□□ 0.79
PDCD5-201ENST00000221784 NBPF1Q3BBV0 1214 aa19.99■□□□□ 0.79
PDCD5-201ENST00000221784 CDK19Q9BWU1 502 aa19.99■□□□□ 0.79
PDCD5-201ENST00000221784 TULP4Q9NRJ4 1543 aa19.98■□□□□ 0.79
PDCD5-201ENST00000221784 USP32Q8NFA0 1604 aa19.98■□□□□ 0.79
PDCD5-201ENST00000221784 FAM83GA6ND36 823 aa19.97■□□□□ 0.79
PDCD5-201ENST00000221784 PAK3O75914 559 aaPredicted RBP19.97■□□□□ 0.79
PDCD5-201ENST00000221784 VPS72Q15906 364 aa19.96■□□□□ 0.79
PDCD5-201ENST00000221784 CCDC9Q9Y3X0 531 aaKnown RBP19.95■□□□□ 0.78
PDCD5-201ENST00000221784 RALGAPBQ86X10 1494 aa19.94■□□□□ 0.78
PDCD5-201ENST00000221784 CCDC61Q9Y6R9 512 aa19.94■□□□□ 0.78
PDCD5-201ENST00000221784 MARF1Q9Y4F3 1742 aaKnown RBP19.93■□□□□ 0.78
PDCD5-201ENST00000221784 L3MBTL2Q969R5 705 aa19.93■□□□□ 0.78
PDCD5-201ENST00000221784 CCDC125Q86Z20 511 aa19.92■□□□□ 0.78
PDCD5-201ENST00000221784 SEPT12Q8IYM1 358 aa19.91■□□□□ 0.78
PDCD5-201ENST00000221784 SIN3AQ96ST3 1273 aa19.91■□□□□ 0.78
PDCD5-201ENST00000221784 PLEKHG3A1L390 1219 aa19.9■□□□□ 0.78
PDCD5-201ENST00000221784 ONECUT3O60422 494 aaPredicted RBP19.9■□□□□ 0.78
PDCD5-201ENST00000221784 NBPF8Q3BBV2 869 aa19.9■□□□□ 0.78
PDCD5-201ENST00000221784 BTG4Q9NY30 223 aa19.9■□□□□ 0.78
PDCD5-201ENST00000221784 ATP7BP35670 1465 aa19.9■□□□□ 0.78
PDCD5-201ENST00000221784 ACEP12821 1306 aa19.89■□□□□ 0.77
PDCD5-201ENST00000221784 NEUROD1Q13562 356 aa19.89■□□□□ 0.77
PDCD5-201ENST00000221784 CENPJQ9HC77 1338 aaPredicted RBP19.89■□□□□ 0.77
PDCD5-201ENST00000221784 ARHGEF28Q8N1W1 1705 aaKnown RBP19.88■□□□□ 0.77
PDCD5-201ENST00000221784 SRPK2P78362 688 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms