RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 C22orf23Q9BZE7 217 aa5.35□□□□□ -1.55
CHD9-201ENST00000219084 KIF3BO15066 747 aa5.35□□□□□ -1.55
CHD9-201ENST00000219084 NASPP49321 788 aaPredicted RBP5.35□□□□□ -1.55
CHD9-201ENST00000219084 ANKRD45Q5TZF3 282 aa5.35□□□□□ -1.55
CHD9-201ENST00000219084 JPH4Q96JJ6 628 aa5.35□□□□□ -1.55
CHD9-201ENST00000219084 MYO6Q9UM54 1294 aa5.35□□□□□ -1.55
CHD9-201ENST00000219084 ERBINQ96RT1 1412 aa5.35□□□□□ -1.55
CHD9-201ENST00000219084 SYNE3Q6ZMZ3 975 aa5.35□□□□□ -1.55
CHD9-201ENST00000219084 TRIM29Q14134 588 aa5.34□□□□□ -1.55
CHD9-201ENST00000219084 TPD52L1Q16890 204 aaPredicted RBP5.34□□□□□ -1.55
CHD9-201ENST00000219084 CAMSAP2Q08AD1 1489 aa5.34□□□□□ -1.55
CHD9-201ENST00000219084 DIAPH1O60610 1272 aaKnown RBP5.34□□□□□ -1.55
CHD9-201ENST00000219084 HNRNPMP52272 730 aaKnown RBP eCLIP5.34□□□□□ -1.55
CHD9-201ENST00000219084 AKAP17AQ02040 695 aaKnown RBP5.34□□□□□ -1.55
CHD9-201ENST00000219084 TAF7LQ5H9L4 462 aa5.34□□□□□ -1.55
CHD9-201ENST00000219084 AMOTL1Q8IY63 956 aa5.34□□□□□ -1.55
CHD9-201ENST00000219084 CEP89Q96ST8 783 aa5.34□□□□□ -1.55
CHD9-201ENST00000219084 MAGI1Q96QZ7 1491 aaPredicted RBP5.34□□□□□ -1.55
CHD9-201ENST00000219084 PIP4K2AP48426 406 aaPredicted RBP5.34□□□□□ -1.55
CHD9-201ENST00000219084 WDR63Q8IWG1 891 aa5.34□□□□□ -1.55
CHD9-201ENST00000219084 NKTRP30414 1462 aaKnown RBP5.34□□□□□ -1.56
CHD9-201ENST00000219084 AMPHP49418 695 aa5.34□□□□□ -1.56
CHD9-201ENST00000219084 SASS6Q6UVJ0 657 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 SRCIN1Q9C0H9 1055 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 ANKRD30BQ9BXX2 1392 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 ARHGEF12Q9NZN5 1544 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 ANKRD1Q15327 319 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 TPRNQ4KMQ1 711 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 ERC1Q8IUD2 1116 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 EXOC6Q8TAG9 804 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 KIF1BO60333 1816 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 C1orf141Q5JVX7 400 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 VIRMAQ69YN4 1812 aaKnown RBP5.33□□□□□ -1.56
CHD9-201ENST00000219084 RPGRIP1LQ68CZ1 1315 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 NSD2O96028 1365 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 KDM5AP29375 1690 aaKnown RBP5.33□□□□□ -1.56
CHD9-201ENST00000219084 A0A0G2JS52 829 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 DHX16O60231 1041 aaKnown RBP5.33□□□□□ -1.56
CHD9-201ENST00000219084 GGT6Q6P531 493 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 CCDC146Q8IYE0 955 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 RRP9O43818 475 aaKnown RBP5.33□□□□□ -1.56
CHD9-201ENST00000219084 RASSF8Q8NHQ8 419 aa5.33□□□□□ -1.56
CHD9-201ENST00000219084 RAD54L2Q9Y4B4 1467 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 ABCC11Q96J66 1382 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 NFKBIBQ15653 356 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 CCDC73Q6ZRK6 1079 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 AEBP1Q8IUX7 1158 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 KIAA0586Q9BVV6 1533 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 ZNF771Q7L3S4 317 aaPredicted RBP5.32□□□□□ -1.56
CHD9-201ENST00000219084 STK26Q9P289 416 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 RALGAPBQ86X10 1494 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 HSP90B2PQ58FF3 399 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 CNTROBQ8N137 903 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 DCTN1Q14203 1278 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 SMC3Q9UQE7 1217 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 KIF2AO00139 706 aaPredicted RBP5.32□□□□□ -1.56
CHD9-201ENST00000219084 PDCL2Q8N4E4 241 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 BRMS1Q9HCU9 246 aa5.32□□□□□ -1.56
CHD9-201ENST00000219084 RDXP35241 583 aaKnown RBP5.31□□□□□ -1.56
CHD9-201ENST00000219084 TRDNQ13061 729 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 GNAI3P08754 354 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 IFIT2P09913 472 aaKnown RBP5.31□□□□□ -1.56
CHD9-201ENST00000219084 XBP1P17861 261 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 SAFBQ15424 915 aaKnown RBP eCLIP5.31□□□□□ -1.56
CHD9-201ENST00000219084 LMOD2Q6P5Q4 547 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 NUP160Q12769 1436 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 OLFM4Q6UX06 510 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 RPRD2Q5VT52 1461 aaKnown RBP5.31□□□□□ -1.56
CHD9-201ENST00000219084 CFAP74Q9C0B2 1584 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 NGDNQ8NEJ9 315 aaKnown RBP5.31□□□□□ -1.56
CHD9-201ENST00000219084 DNMT1P26358 1616 aaKnown RBP5.31□□□□□ -1.56
CHD9-201ENST00000219084 NAIPQ13075 1403 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 SLC4A10Q6U841 1118 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 RUFY1Q96T51 708 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 C9orf78Q9NZ63 289 aaPredicted RBP5.31□□□□□ -1.56
CHD9-201ENST00000219084 UGGT2Q9NYU1 1516 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 ZNF396Q96N95 335 aaPredicted RBP5.31□□□□□ -1.56
CHD9-201ENST00000219084 TSPY26PQ9H489 355 aa5.31□□□□□ -1.56
CHD9-201ENST00000219084 ATAD2Q6PL18 1390 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 APBB1O00213 710 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 NCOA1Q15788 1441 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 GPRASP1Q5JY77 1395 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 JMYQ8N9B5 988 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 BICRAQ9NZM4 1560 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 RIPK4P57078 832 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 RILPL2Q969X0 211 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 CPLX1O14810 134 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 CCT4P50991 539 aaKnown RBP5.3□□□□□ -1.56
CHD9-201ENST00000219084 BACH2Q9BYV9 841 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 NOL10Q9BSC4 688 aaKnown RBP5.3□□□□□ -1.56
CHD9-201ENST00000219084 TSPYL1Q9H0U9 437 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 ANO2Q9NQ90 1003 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 MYO5CQ9NQX4 1742 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 ERICH2A1L162 156 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 MCM5P33992 734 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 DACH1Q9UI36 760 aa5.3□□□□□ -1.56
CHD9-201ENST00000219084 HMGB2P26583 209 aaKnown RBP5.3□□□□□ -1.56
CHD9-201ENST00000219084 G3BP1Q13283 466 aaKnown RBP eCLIP5.3□□□□□ -1.56
CHD9-201ENST00000219084 SMARCE1Q969G3 411 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms