RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TRIM34Q9BYJ4 488 aa16.53■□□□□ 0.24
TGFBR3-201ENST00000212355 HDAC5Q9UQL6 1122 aa16.53■□□□□ 0.24
TGFBR3-201ENST00000212355 TCEAL9Q9UHQ7 104 aa16.52■□□□□ 0.24
TGFBR3-201ENST00000212355 ATP6V1DQ9Y5K8 247 aa16.52■□□□□ 0.24
TGFBR3-201ENST00000212355 INTS3Q68E01 1043 aaKnown RBP16.52■□□□□ 0.24
TGFBR3-201ENST00000212355 FMNL2Q96PY5 1086 aa16.52■□□□□ 0.23
TGFBR3-201ENST00000212355 STK3Q13188 491 aa16.52■□□□□ 0.23
TGFBR3-201ENST00000212355 RUFY2Q8WXA3 655 aa16.51■□□□□ 0.23
TGFBR3-201ENST00000212355 TPM2P07951 284 aa16.51■□□□□ 0.23
TGFBR3-201ENST00000212355 FAM43AQ8N2R8 423 aa16.51■□□□□ 0.23
TGFBR3-201ENST00000212355 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
TGFBR3-201ENST00000212355 VGFO15240 615 aaPredicted RBP16.51■□□□□ 0.23
TGFBR3-201ENST00000212355 TPM1P09493 284 aa16.51■□□□□ 0.23
TGFBR3-201ENST00000212355 MTHFSP49914 203 aa16.51■□□□□ 0.23
TGFBR3-201ENST00000212355 PRPF40AO75400 957 aaKnown RBP16.5■□□□□ 0.23
TGFBR3-201ENST00000212355 NASPP49321 788 aaPredicted RBP16.49■□□□□ 0.23
TGFBR3-201ENST00000212355 PDZRN3Q9UPQ7 1066 aa16.49■□□□□ 0.23
TGFBR3-201ENST00000212355 NOB1Q9ULX3 412 aaKnown RBP16.48■□□□□ 0.23
TGFBR3-201ENST00000212355 TRDNQ13061 729 aa16.48■□□□□ 0.23
TGFBR3-201ENST00000212355 BRPF1P55201 1214 aaPredicted RBP16.48■□□□□ 0.23
TGFBR3-201ENST00000212355 SIL1Q9H173 461 aa16.48■□□□□ 0.23
TGFBR3-201ENST00000212355 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
TGFBR3-201ENST00000212355 NOL10Q9BSC4 688 aaKnown RBP16.47■□□□□ 0.23
TGFBR3-201ENST00000212355 TRAK2O60296 914 aa16.47■□□□□ 0.23
TGFBR3-201ENST00000212355 NBPF1Q3BBV0 1214 aa16.47■□□□□ 0.23
TGFBR3-201ENST00000212355 RRP12Q5JTH9 1297 aaKnown RBP16.46■□□□□ 0.23
TGFBR3-201ENST00000212355 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
TGFBR3-201ENST00000212355 NLRP2Q9NX02 1062 aa16.46■□□□□ 0.23
TGFBR3-201ENST00000212355 CTDP1Q9Y5B0 961 aaPredicted RBP16.46■□□□□ 0.23
TGFBR3-201ENST00000212355 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
TGFBR3-201ENST00000212355 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.22
TGFBR3-201ENST00000212355 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
TGFBR3-201ENST00000212355 SETQ01105 290 aaPredicted RBP16.45■□□□□ 0.22
TGFBR3-201ENST00000212355 CNTLNQ9NXG0 1405 aa16.45■□□□□ 0.22
TGFBR3-201ENST00000212355 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
TGFBR3-201ENST00000212355 ERICH2A1L162 156 aa16.45■□□□□ 0.22
TGFBR3-201ENST00000212355 FSD1Q9BTV5 496 aa16.45■□□□□ 0.22
TGFBR3-201ENST00000212355 FIBPO43427 364 aa16.44■□□□□ 0.22
TGFBR3-201ENST00000212355 TCP11L2Q8N4U5 519 aa16.44■□□□□ 0.22
TGFBR3-201ENST00000212355 NEK4P51957 841 aa16.44■□□□□ 0.22
TGFBR3-201ENST00000212355 CFAP70Q5T0N1 1121 aa16.44■□□□□ 0.22
TGFBR3-201ENST00000212355 MEX3CQ5U5Q3 659 aaKnown RBP16.44■□□□□ 0.22
TGFBR3-201ENST00000212355 SURF6O75683 361 aaKnown RBP16.44■□□□□ 0.22
TGFBR3-201ENST00000212355 SMC2O95347 1197 aa16.43■□□□□ 0.22
TGFBR3-201ENST00000212355 AMOTL1Q8IY63 956 aa16.43■□□□□ 0.22
TGFBR3-201ENST00000212355 RNF20Q5VTR2 975 aa16.43■□□□□ 0.22
TGFBR3-201ENST00000212355 CDC45O75419 566 aa16.43■□□□□ 0.22
TGFBR3-201ENST00000212355 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
TGFBR3-201ENST00000212355 DDX58O95786 925 aaKnown RBP16.42■□□□□ 0.22
TGFBR3-201ENST00000212355 PRKAR2BP31323 418 aa16.42■□□□□ 0.22
TGFBR3-201ENST00000212355 CCDC73Q6ZRK6 1079 aa16.42■□□□□ 0.22
TGFBR3-201ENST00000212355 CCDC70Q6NSX1 233 aa16.41■□□□□ 0.22
TGFBR3-201ENST00000212355 UACAQ9BZF9 1416 aa16.41■□□□□ 0.22
TGFBR3-201ENST00000212355 MNS1Q8NEH6 495 aa16.41■□□□□ 0.22
TGFBR3-201ENST00000212355 GNAI1P63096 354 aa16.41■□□□□ 0.22
TGFBR3-201ENST00000212355 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
TGFBR3-201ENST00000212355 PTPRGP23470 1445 aa16.4■□□□□ 0.22
TGFBR3-201ENST00000212355 RALYLQ86SE5 291 aaKnown RBP16.4■□□□□ 0.22
TGFBR3-201ENST00000212355 TRIM5Q9C035 493 aa16.4■□□□□ 0.22
TGFBR3-201ENST00000212355 IPO7O95373 1038 aaKnown RBP16.4■□□□□ 0.22
TGFBR3-201ENST00000212355 NLRP6P59044 892 aa16.4■□□□□ 0.22
TGFBR3-201ENST00000212355 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
TGFBR3-201ENST00000212355 SDF4Q9BRK5 362 aa16.4■□□□□ 0.22
TGFBR3-201ENST00000212355 NUCB2P80303 420 aa16.39■□□□□ 0.21
TGFBR3-201ENST00000212355 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
TGFBR3-201ENST00000212355 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.39■□□□□ 0.21
TGFBR3-201ENST00000212355 MYL6BP14649 208 aa16.39■□□□□ 0.21
TGFBR3-201ENST00000212355 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
TGFBR3-201ENST00000212355 ZFYVE27Q5T4F4 411 aa16.39■□□□□ 0.21
TGFBR3-201ENST00000212355 RSPH4AQ5TD94 716 aa16.39■□□□□ 0.21
TGFBR3-201ENST00000212355 GPS2Q13227 327 aa16.39■□□□□ 0.21
TGFBR3-201ENST00000212355 PIBF1Q8WXW3 757 aa16.39■□□□□ 0.21
TGFBR3-201ENST00000212355 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
TGFBR3-201ENST00000212355 STRN4Q9NRL3 753 aa16.38■□□□□ 0.21
TGFBR3-201ENST00000212355 IKQ13123 557 aaPredicted RBP16.38■□□□□ 0.21
TGFBR3-201ENST00000212355 ERC2O15083 957 aa16.38■□□□□ 0.21
TGFBR3-201ENST00000212355 CAGE1Q8TC20 777 aa16.38■□□□□ 0.21
TGFBR3-201ENST00000212355 RBM33Q96EV2 1170 aaKnown RBP16.38■□□□□ 0.21
TGFBR3-201ENST00000212355 RAPGEF4Q8WZA2 1011 aa16.38■□□□□ 0.21
TGFBR3-201ENST00000212355 MIS18AQ9NYP9 233 aa16.38■□□□□ 0.21
TGFBR3-201ENST00000212355 ANKRD20A12PQ8NF67 263 aa16.37■□□□□ 0.21
TGFBR3-201ENST00000212355 SLC12A5Q9H2X9 1139 aa16.37■□□□□ 0.21
TGFBR3-201ENST00000212355 CNTROBQ8N137 903 aa16.37■□□□□ 0.21
TGFBR3-201ENST00000212355 ABTB2Q8N961 1025 aa16.37■□□□□ 0.21
TGFBR3-201ENST00000212355 CCDC85AQ96PX6 553 aaPredicted RBP16.37■□□□□ 0.21
TGFBR3-201ENST00000212355 CCDC43Q96MW1 224 aaKnown RBP16.37■□□□□ 0.21
TGFBR3-201ENST00000212355 TXNDC2Q86VQ3 553 aa16.36■□□□□ 0.21
TGFBR3-201ENST00000212355 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
TGFBR3-201ENST00000212355 ROCK1Q13464 1354 aa16.36■□□□□ 0.21
TGFBR3-201ENST00000212355 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
TGFBR3-201ENST00000212355 XPCQ01831 940 aaPredicted RBP16.35■□□□□ 0.21
TGFBR3-201ENST00000212355 ESCO1Q5FWF5 840 aa16.35■□□□□ 0.21
TGFBR3-201ENST00000212355 AFAP1Q8N556 730 aa16.35■□□□□ 0.21
TGFBR3-201ENST00000212355 RUFY1Q96T51 708 aa16.35■□□□□ 0.21
TGFBR3-201ENST00000212355 FGD6Q6ZV73 1430 aa16.35■□□□□ 0.21
TGFBR3-201ENST00000212355 TWISTNBQ3B726 338 aaPredicted RBP16.35■□□□□ 0.21
TGFBR3-201ENST00000212355 OLFM4Q6UX06 510 aa16.35■□□□□ 0.21
TGFBR3-201ENST00000212355 DDX54Q8TDD1 881 aaKnown RBP16.35■□□□□ 0.21
TGFBR3-201ENST00000212355 TSPY26PQ9H489 355 aa16.35■□□□□ 0.21
TGFBR3-201ENST00000212355 FAM69CQ0P6D2 419 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms