RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 PAK3O75914 559 aaPredicted RBP6.99□□□□□ -1.29
CBX5-201ENST00000209875 FOXD1Q16676 465 aa6.99□□□□□ -1.29
CBX5-201ENST00000209875 CWC22Q9HCG8 908 aaKnown RBP6.99□□□□□ -1.29
CBX5-201ENST00000209875 NOL10Q9BSC4 688 aaKnown RBP6.99□□□□□ -1.29
CBX5-201ENST00000209875 TRIM6-TRIM34B2RNG4 842 aa6.99□□□□□ -1.29
CBX5-201ENST00000209875 AKAP17AQ02040 695 aaKnown RBP6.99□□□□□ -1.29
CBX5-201ENST00000209875 NCBP3Q53F19 620 aaKnown RBP6.99□□□□□ -1.29
CBX5-201ENST00000209875 CCT4P50991 539 aaKnown RBP6.99□□□□□ -1.29
CBX5-201ENST00000209875 CAVIN1Q6NZI2 390 aaKnown RBP6.99□□□□□ -1.29
CBX5-201ENST00000209875 VSIG10Q8N0Z9 540 aa6.99□□□□□ -1.29
CBX5-201ENST00000209875 DHX16O60231 1041 aaKnown RBP6.99□□□□□ -1.29
CBX5-201ENST00000209875 CCDC30Q5VVM6 783 aa6.99□□□□□ -1.29
CBX5-201ENST00000209875 NAIPQ13075 1403 aa6.99□□□□□ -1.29
CBX5-201ENST00000209875 G3BP1Q13283 466 aaKnown RBP eCLIP6.99□□□□□ -1.29
CBX5-201ENST00000209875 FAM43AQ8N2R8 423 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 TRDNQ13061 729 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 ZNF771Q7L3S4 317 aaPredicted RBP6.98□□□□□ -1.29
CBX5-201ENST00000209875 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.98□□□□□ -1.29
CBX5-201ENST00000209875 IPO7O95373 1038 aaKnown RBP6.98□□□□□ -1.29
CBX5-201ENST00000209875 TRIM29Q14134 588 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 TXLNBQ8N3L3 684 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 RIPK4P57078 832 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 PLEKHO1Q53GL0 409 aaPredicted RBP6.98□□□□□ -1.29
CBX5-201ENST00000209875 NAT10Q9H0A0 1025 aaKnown RBP6.98□□□□□ -1.29
CBX5-201ENST00000209875 DCTN1Q14203 1278 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 RPAP2Q8IXW5 612 aaPredicted RBP6.98□□□□□ -1.29
CBX5-201ENST00000209875 FAM184AQ8NB25 1140 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 NAP1L2Q9ULW6 460 aaPredicted RBP6.98□□□□□ -1.29
CBX5-201ENST00000209875 GOLGA6L19H0YKK7 550 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 FCHSD2O94868 740 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 ANKRD1Q15327 319 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 SF3A1Q15459 793 aaKnown RBP6.98□□□□□ -1.29
CBX5-201ENST00000209875 ERCC4Q92889 916 aaPredicted RBP6.98□□□□□ -1.29
CBX5-201ENST00000209875 IFIT2P09913 472 aaKnown RBP6.98□□□□□ -1.29
CBX5-201ENST00000209875 RAPGEF4Q8WZA2 1011 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 TSPYL1Q9H0U9 437 aa6.98□□□□□ -1.29
CBX5-201ENST00000209875 CROCCQ5TZA2 2017 aa6.97□□□□□ -1.29
CBX5-201ENST00000209875 MYH10P35580 1976 aa6.97□□□□□ -1.29
CBX5-201ENST00000209875 XBP1P17861 261 aa6.97□□□□□ -1.29
CBX5-201ENST00000209875 FAM135AQ9P2D6 1515 aa6.97□□□□□ -1.29
CBX5-201ENST00000209875 ERBINQ96RT1 1412 aa6.97□□□□□ -1.29
CBX5-201ENST00000209875 GOLGA4Q13439 2230 aaKnown RBP6.97□□□□□ -1.29
CBX5-201ENST00000209875 C9orf78Q9NZ63 289 aaPredicted RBP6.97□□□□□ -1.29
CBX5-201ENST00000209875 HSP90B2PQ58FF3 399 aa6.97□□□□□ -1.29
CBX5-201ENST00000209875 APAF1O14727 1248 aa6.97□□□□□ -1.29
CBX5-201ENST00000209875 MRE11P49959 708 aa6.97□□□□□ -1.29
CBX5-201ENST00000209875 SAFB2Q14151 953 aaKnown RBP eCLIP6.97□□□□□ -1.29
CBX5-201ENST00000209875 AK7Q96M32 723 aa6.97□□□□□ -1.29
CBX5-201ENST00000209875 WDR97A6NE52 1622 aa6.96□□□□□ -1.29
CBX5-201ENST00000209875 H3BQV1 296 aa6.96□□□□□ -1.29
CBX5-201ENST00000209875 IFFO2Q5TF58 517 aa6.96□□□□□ -1.29
CBX5-201ENST00000209875 BIVM-ERCC5R4GMW8 1640 aa6.96□□□□□ -1.29
CBX5-201ENST00000209875 SAFBQ15424 915 aaKnown RBP eCLIP6.96□□□□□ -1.29
CBX5-201ENST00000209875 NCOA1Q15788 1441 aa6.96□□□□□ -1.3
CBX5-201ENST00000209875 SLKQ9H2G2 1235 aaPredicted RBP6.96□□□□□ -1.3
CBX5-201ENST00000209875 SOS1Q07889 1333 aaPredicted RBP6.96□□□□□ -1.3
CBX5-201ENST00000209875 BECN2A8MW95 431 aa6.96□□□□□ -1.3
CBX5-201ENST00000209875 PPP2R1AP30153 589 aa6.96□□□□□ -1.3
CBX5-201ENST00000209875 GRIN2AQ12879 1464 aa6.96□□□□□ -1.3
CBX5-201ENST00000209875 ALDH1L2Q3SY69 923 aa6.96□□□□□ -1.3
CBX5-201ENST00000209875 CEP89Q96ST8 783 aa6.96□□□□□ -1.3
CBX5-201ENST00000209875 DDX49Q9Y6V7 483 aaKnown RBP6.96□□□□□ -1.3
CBX5-201ENST00000209875 AEBP1Q8IUX7 1158 aa6.95□□□□□ -1.3
CBX5-201ENST00000209875 IL16Q14005 1332 aa6.95□□□□□ -1.3
CBX5-201ENST00000209875 ZSCAN25Q6NSZ9 544 aa6.95□□□□□ -1.3
CBX5-201ENST00000209875 KCNH5Q8NCM2 988 aa6.95□□□□□ -1.3
CBX5-201ENST00000209875 CCDC39Q9UFE4 941 aa6.95□□□□□ -1.3
CBX5-201ENST00000209875 PRKCSHP14314 528 aaPredicted RBP6.95□□□□□ -1.3
CBX5-201ENST00000209875 PLEKHH1Q9ULM0 1364 aa6.95□□□□□ -1.3
CBX5-201ENST00000209875 ANKRD45Q5TZF3 282 aa6.95□□□□□ -1.3
CBX5-201ENST00000209875 JMYQ8N9B5 988 aa6.95□□□□□ -1.3
CBX5-201ENST00000209875 PLB1Q6P1J6 1458 aa6.95□□□□□ -1.3
CBX5-201ENST00000209875 BRMS1Q9HCU9 246 aa6.95□□□□□ -1.3
CBX5-201ENST00000209875 CLASRPQ8N2M8 674 aaKnown RBP6.95□□□□□ -1.3
CBX5-201ENST00000209875 GZF1Q9H116 711 aaPredicted RBP6.95□□□□□ -1.3
CBX5-201ENST00000209875 SHANK2Q9UPX8 1470 aa6.94□□□□□ -1.3
CBX5-201ENST00000209875 ERICH2A1L162 156 aa6.94□□□□□ -1.3
CBX5-201ENST00000209875 SART3Q15020 963 aaKnown RBP6.94□□□□□ -1.3
CBX5-201ENST00000209875 ZSCAN31Q96LW9 406 aaPredicted RBP6.94□□□□□ -1.3
CBX5-201ENST00000209875 KIF14Q15058 1648 aa6.94□□□□□ -1.3
CBX5-201ENST00000209875 CPLX1O14810 134 aa6.94□□□□□ -1.3
CBX5-201ENST00000209875 RPRD2Q5VT52 1461 aaKnown RBP6.94□□□□□ -1.3
CBX5-201ENST00000209875 RRP9O43818 475 aaKnown RBP6.94□□□□□ -1.3
CBX5-201ENST00000209875 GTF2E1P29083 439 aaPredicted RBP6.94□□□□□ -1.3
CBX5-201ENST00000209875 CNTROBQ8N137 903 aa6.94□□□□□ -1.3
CBX5-201ENST00000209875 USP8P40818 1118 aa6.94□□□□□ -1.3
CBX5-201ENST00000209875 KRT32Q14532 448 aa6.94□□□□□ -1.3
CBX5-201ENST00000209875 SLC4A10Q6U841 1118 aa6.94□□□□□ -1.3
CBX5-201ENST00000209875 CCDC73Q6ZRK6 1079 aa6.94□□□□□ -1.3
CBX5-201ENST00000209875 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.94□□□□□ -1.3
CBX5-201ENST00000209875 APPP05067 770 aa6.93□□□□□ -1.3
CBX5-201ENST00000209875 UBTFL1P0CB47 393 aaPredicted RBP6.93□□□□□ -1.3
CBX5-201ENST00000209875 RASSF8Q8NHQ8 419 aa6.93□□□□□ -1.3
CBX5-201ENST00000209875 FKBP5Q13451 457 aaPredicted RBP6.93□□□□□ -1.3
CBX5-201ENST00000209875 CCDC191Q8NCU4 936 aa6.93□□□□□ -1.3
CBX5-201ENST00000209875 PKNOX2Q96KN3 472 aa6.93□□□□□ -1.3
CBX5-201ENST00000209875 MYO6Q9UM54 1294 aa6.93□□□□□ -1.3
CBX5-201ENST00000209875 ATF3P18847 181 aa6.93□□□□□ -1.3
CBX5-201ENST00000209875 C22orf23Q9BZE7 217 aa6.93□□□□□ -1.3
CBX5-201ENST00000209875 SLC3A2P08195 630 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms