RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 KIF7Q2M1P5 1343 aa13.4□□□□□ -0.26
CHERP-201ENST00000198939 RCAN3Q9UKA8 241 aa13.4□□□□□ -0.26
CHERP-201ENST00000198939 ARHGAP23Q9P227 1491 aa13.39□□□□□ -0.27
CHERP-201ENST00000198939 FAM43AQ8N2R8 423 aa13.39□□□□□ -0.27
CHERP-201ENST00000198939 SCAF11Q99590 1463 aaKnown RBP13.39□□□□□ -0.27
CHERP-201ENST00000198939 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
CHERP-201ENST00000198939 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
CHERP-201ENST00000198939 NUTM2DQ5VT03 806 aaPredicted RBP13.35□□□□□ -0.27
CHERP-201ENST00000198939 C14orf93Q9H972 538 aaKnown RBP13.35□□□□□ -0.27
CHERP-201ENST00000198939 TBX22Q9Y458 520 aa13.35□□□□□ -0.27
CHERP-201ENST00000198939 ADGRF5Q8IZF2 1346 aa13.35□□□□□ -0.27
CHERP-201ENST00000198939 LMTK3Q96Q04 1460 aa13.35□□□□□ -0.27
CHERP-201ENST00000198939 LTKP29376 864 aa13.34□□□□□ -0.27
CHERP-201ENST00000198939 PRAG1Q86YV5 1406 aa13.34□□□□□ -0.27
CHERP-201ENST00000198939 NPHP4O75161 1426 aaPredicted RBP13.34□□□□□ -0.27
CHERP-201ENST00000198939 PPLO60437 1756 aa13.33□□□□□ -0.28
CHERP-201ENST00000198939 FRAT2O75474 233 aaPredicted RBP13.33□□□□□ -0.28
CHERP-201ENST00000198939 HSPA2P54652 639 aa13.33□□□□□ -0.28
CHERP-201ENST00000198939 NRXN1Q9ULB1 1477 aa13.33□□□□□ -0.28
CHERP-201ENST00000198939 NCKAP5LQ9HCH0 1330 aa13.32□□□□□ -0.28
CHERP-201ENST00000198939 PIK3C2GO75747 1445 aa13.32□□□□□ -0.28
CHERP-201ENST00000198939 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
CHERP-201ENST00000198939 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
CHERP-201ENST00000198939 MED14O60244 1454 aa13.32□□□□□ -0.28
CHERP-201ENST00000198939 PIK3R4Q99570 1358 aa13.32□□□□□ -0.28
CHERP-201ENST00000198939 CARD11Q9BXL7 1154 aa13.31□□□□□ -0.28
CHERP-201ENST00000198939 DIP2AQ14689 1571 aa13.3□□□□□ -0.28
CHERP-201ENST00000198939 MYO5BQ9ULV0 1848 aa13.3□□□□□ -0.28
CHERP-201ENST00000198939 NBPF8Q3BBV2 869 aa13.3□□□□□ -0.28
CHERP-201ENST00000198939 CFAP70Q5T0N1 1121 aa13.3□□□□□ -0.28
CHERP-201ENST00000198939 LAMC1P11047 1609 aa13.3□□□□□ -0.28
CHERP-201ENST00000198939 SKAP1Q86WV1 359 aa13.3□□□□□ -0.28
CHERP-201ENST00000198939 EIF3AQ14152 1382 aaKnown RBP13.3□□□□□ -0.28
CHERP-201ENST00000198939 IFT172Q9UG01 1749 aa13.3□□□□□ -0.28
CHERP-201ENST00000198939 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
CHERP-201ENST00000198939 PLIN1O60240 522 aa13.29□□□□□ -0.28
CHERP-201ENST00000198939 RALGAPBQ86X10 1494 aa13.28□□□□□ -0.28
CHERP-201ENST00000198939 KIAA1210Q9ULL0 1709 aa13.27□□□□□ -0.28
CHERP-201ENST00000198939 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.29
CHERP-201ENST00000198939 SIRT1Q96EB6 747 aa13.27□□□□□ -0.29
CHERP-201ENST00000198939 L1TD1Q5T7N2 865 aaKnown RBP13.26□□□□□ -0.29
CHERP-201ENST00000198939 HSP90AA1P07900 732 aaKnown RBP13.26□□□□□ -0.29
CHERP-201ENST00000198939 HSP90AA2PQ14568 343 aaPredicted RBP13.26□□□□□ -0.29
CHERP-201ENST00000198939 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
CHERP-201ENST00000198939 ALKQ9UM73 1620 aa13.26□□□□□ -0.29
CHERP-201ENST00000198939 GPRASP1Q5JY77 1395 aa13.26□□□□□ -0.29
CHERP-201ENST00000198939 PODXL2Q9NZ53 605 aa13.25□□□□□ -0.29
CHERP-201ENST00000198939 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
CHERP-201ENST00000198939 PDE3BQ13370 1112 aa13.25□□□□□ -0.29
CHERP-201ENST00000198939 KCNA6P17658 529 aa13.25□□□□□ -0.29
CHERP-201ENST00000198939 PNNQ9H307 717 aaKnown RBP13.25□□□□□ -0.29
CHERP-201ENST00000198939 LRPPRCP42704 1394 aaKnown RBP13.25□□□□□ -0.29
CHERP-201ENST00000198939 RGS3P49796 1198 aa13.24□□□□□ -0.29
CHERP-201ENST00000198939 FAM161AQ3B820 660 aa13.24□□□□□ -0.29
CHERP-201ENST00000198939 ADAMTS13Q76LX8 1427 aa13.24□□□□□ -0.29
CHERP-201ENST00000198939 POGKQ9P215 609 aa13.24□□□□□ -0.29
CHERP-201ENST00000198939 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
CHERP-201ENST00000198939 ABCC11Q96J66 1382 aa13.24□□□□□ -0.29
CHERP-201ENST00000198939 ZMYND15Q9H091 742 aa13.24□□□□□ -0.29
CHERP-201ENST00000198939 NBPF1Q3BBV0 1214 aa13.23□□□□□ -0.29
CHERP-201ENST00000198939 SENP3Q9H4L4 574 aaPredicted RBP13.23□□□□□ -0.29
CHERP-201ENST00000198939 A0A0U1RQG5 324 aaPredicted RBP13.23□□□□□ -0.29
CHERP-201ENST00000198939 TMEM132EQ6IEE7 984 aa13.23□□□□□ -0.29
CHERP-201ENST00000198939 AMOTL2Q9Y2J4 779 aa13.23□□□□□ -0.29
CHERP-201ENST00000198939 STK26Q9P289 416 aa13.22□□□□□ -0.29
CHERP-201ENST00000198939 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
CHERP-201ENST00000198939 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.29
CHERP-201ENST00000198939 TRAK1Q9UPV9 953 aa13.21□□□□□ -0.3
CHERP-201ENST00000198939 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
CHERP-201ENST00000198939 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
CHERP-201ENST00000198939 MYBBP1AQ9BQG0 1328 aaKnown RBP13.2□□□□□ -0.3
CHERP-201ENST00000198939 METP08581 1390 aa13.2□□□□□ -0.3
CHERP-201ENST00000198939 RALBP1Q15311 655 aa13.2□□□□□ -0.3
CHERP-201ENST00000198939 BECN1Q14457 450 aa13.2□□□□□ -0.3
CHERP-201ENST00000198939 TRIM44Q96DX7 344 aaPredicted RBP13.2□□□□□ -0.3
CHERP-201ENST00000198939 USP47Q96K76 1375 aa13.19□□□□□ -0.3
CHERP-201ENST00000198939 CENPJQ9HC77 1338 aaPredicted RBP13.19□□□□□ -0.3
CHERP-201ENST00000198939 FAM135BQ49AJ0 1406 aa13.19□□□□□ -0.3
CHERP-201ENST00000198939 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
CHERP-201ENST00000198939 PROSER2Q86WR7 435 aaPredicted RBP13.18□□□□□ -0.3
CHERP-201ENST00000198939 SLKQ9H2G2 1235 aaPredicted RBP13.18□□□□□ -0.3
CHERP-201ENST00000198939 RRAGDQ9NQL2 400 aaPredicted RBP13.18□□□□□ -0.3
CHERP-201ENST00000198939 DLC1Q96QB1 1528 aa13.18□□□□□ -0.3
CHERP-201ENST00000198939 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
CHERP-201ENST00000198939 ARID3AQ99856 593 aa13.17□□□□□ -0.3
CHERP-201ENST00000198939 BRD4O60885 1362 aaPredicted RBP13.17□□□□□ -0.3
CHERP-201ENST00000198939 TECPR2O15040 1411 aa13.17□□□□□ -0.3
CHERP-201ENST00000198939 KTN1Q86UP2 1357 aaKnown RBP13.17□□□□□ -0.3
CHERP-201ENST00000198939 ADGRB1O14514 1584 aa13.17□□□□□ -0.3
CHERP-201ENST00000198939 C14orf37Q86TY3 774 aa13.17□□□□□ -0.3
CHERP-201ENST00000198939 ANP32BQ92688 251 aaKnown RBP13.17□□□□□ -0.3
CHERP-201ENST00000198939 PTCH1Q13635 1447 aa13.17□□□□□ -0.3
CHERP-201ENST00000198939 NCOA3Q9Y6Q9 1424 aa13.16□□□□□ -0.3
CHERP-201ENST00000198939 TMF1P82094 1093 aa13.16□□□□□ -0.3
CHERP-201ENST00000198939 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
CHERP-201ENST00000198939 PRAM1Q96QH2 718 aa13.16□□□□□ -0.3
CHERP-201ENST00000198939 STRCQ7RTU9 1775 aa13.15□□□□□ -0.3
CHERP-201ENST00000198939 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.15□□□□□ -0.3
CHERP-201ENST00000198939 NLRP13Q86W25 1043 aa13.15□□□□□ -0.3
CHERP-201ENST00000198939 GOLGA6L3A6NEY3 463 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms