RNA–Protein interactions for RNA: ENST00000194155.6

PCDHB2-201, Transcript of protocadherin beta 2, humanhuman

APPRIS P1 BASIC

Gene PCDHB2, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-201ENST00000194155 STK31Q9BXU1 1019 aa16.26■□□□□ 0.19
PCDHB2-201ENST00000194155 FOXO3O43524 673 aa16.25■□□□□ 0.19
PCDHB2-201ENST00000194155 RAPGEF4Q8WZA2 1011 aa16.25■□□□□ 0.19
PCDHB2-201ENST00000194155 NUDT16Q96DE0 195 aaKnown RBP16.25■□□□□ 0.19
PCDHB2-201ENST00000194155 STRN4Q9NRL3 753 aa16.24■□□□□ 0.19
PCDHB2-201ENST00000194155 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
PCDHB2-201ENST00000194155 ZMYND15Q9H091 742 aa16.24■□□□□ 0.19
PCDHB2-201ENST00000194155 NOS1P29475 1434 aa16.23■□□□□ 0.19
PCDHB2-201ENST00000194155 RNF123Q5XPI4 1314 aa16.22■□□□□ 0.19
PCDHB2-201ENST00000194155 BRD4O60885 1362 aaPredicted RBP16.22■□□□□ 0.19
PCDHB2-201ENST00000194155 ZMYM3Q14202 1370 aa16.22■□□□□ 0.19
PCDHB2-201ENST00000194155 CLUAP1Q96AJ1 413 aa16.22■□□□□ 0.19
PCDHB2-201ENST00000194155 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
PCDHB2-201ENST00000194155 IPO8O15397 1037 aaKnown RBP16.21■□□□□ 0.19
PCDHB2-201ENST00000194155 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.19
PCDHB2-201ENST00000194155 HSP90AB1P08238 724 aaKnown RBP16.2■□□□□ 0.18
PCDHB2-201ENST00000194155 ZC3H6P61129 1189 aaKnown RBP16.2■□□□□ 0.18
PCDHB2-201ENST00000194155 CHMP4BQ9H444 224 aaKnown RBP16.2■□□□□ 0.18
PCDHB2-201ENST00000194155 CHD1O14646 1710 aa16.2■□□□□ 0.18
PCDHB2-201ENST00000194155 PRDM11Q9NQV5 511 aa16.2■□□□□ 0.18
PCDHB2-201ENST00000194155 MFAP1P55081 439 aaKnown RBP16.2■□□□□ 0.18
PCDHB2-201ENST00000194155 UHRF1BP1LA0JNW5 1464 aa16.19■□□□□ 0.18
PCDHB2-201ENST00000194155 SLC4A10Q6U841 1118 aa16.19■□□□□ 0.18
PCDHB2-201ENST00000194155 DUOX2Q9NRD8 1548 aa16.19■□□□□ 0.18
PCDHB2-201ENST00000194155 COG6Q9Y2V7 657 aa16.19■□□□□ 0.18
PCDHB2-201ENST00000194155 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
PCDHB2-201ENST00000194155 RIPK4P57078 832 aa16.18■□□□□ 0.18
PCDHB2-201ENST00000194155 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
PCDHB2-201ENST00000194155 CHMP4AQ9BY43 222 aa16.18■□□□□ 0.18
PCDHB2-201ENST00000194155 SAMD9Q5K651 1589 aa16.18■□□□□ 0.18
PCDHB2-201ENST00000194155 APBB1O00213 710 aa16.18■□□□□ 0.18
PCDHB2-201ENST00000194155 C14orf93Q9H972 538 aaKnown RBP16.18■□□□□ 0.18
PCDHB2-201ENST00000194155 HSCBQ8IWL3 235 aa16.18■□□□□ 0.18
PCDHB2-201ENST00000194155 BCL2L13Q9BXK5 485 aa16.18■□□□□ 0.18
PCDHB2-201ENST00000194155 ADAMTS8Q9UP79 889 aa16.18■□□□□ 0.18
PCDHB2-201ENST00000194155 RRAGDQ9NQL2 400 aaPredicted RBP16.17■□□□□ 0.18
PCDHB2-201ENST00000194155 ITSN2Q9NZM3 1697 aa16.17■□□□□ 0.18
PCDHB2-201ENST00000194155 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
PCDHB2-201ENST00000194155 ATAD2Q6PL18 1390 aa16.16■□□□□ 0.18
PCDHB2-201ENST00000194155 NGEFQ8N5V2 710 aa16.16■□□□□ 0.18
PCDHB2-201ENST00000194155 TTC5Q8N0Z6 440 aa16.15■□□□□ 0.18
PCDHB2-201ENST00000194155 PHF8Q9UPP1 1060 aa16.15■□□□□ 0.18
PCDHB2-201ENST00000194155 MSNP26038 577 aaKnown RBP16.15■□□□□ 0.18
PCDHB2-201ENST00000194155 ITPRIPQ8IWB1 547 aa16.15■□□□□ 0.18
PCDHB2-201ENST00000194155 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
PCDHB2-201ENST00000194155 RRS1Q15050 365 aaKnown RBP16.14■□□□□ 0.17
PCDHB2-201ENST00000194155 WASLO00401 505 aaPredicted RBP16.14■□□□□ 0.17
PCDHB2-201ENST00000194155 GTF2E1P29083 439 aaPredicted RBP16.14■□□□□ 0.17
PCDHB2-201ENST00000194155 NECTIN2Q92692 538 aa16.14■□□□□ 0.17
PCDHB2-201ENST00000194155 PTMAP06454 111 aaKnown RBP16.13■□□□□ 0.17
PCDHB2-201ENST00000194155 ATP10AO60312 1499 aa16.13■□□□□ 0.17
PCDHB2-201ENST00000194155 TOM1L2Q6ZVM7 507 aa16.13■□□□□ 0.17
PCDHB2-201ENST00000194155 NCKAP5LQ9HCH0 1330 aa16.13■□□□□ 0.17
PCDHB2-201ENST00000194155 FAM135AQ9P2D6 1515 aa16.13■□□□□ 0.17
PCDHB2-201ENST00000194155 PPP2R1AP30153 589 aa16.13■□□□□ 0.17
PCDHB2-201ENST00000194155 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
PCDHB2-201ENST00000194155 RPRD2Q5VT52 1461 aaKnown RBP16.12■□□□□ 0.17
PCDHB2-201ENST00000194155 BCAR3O75815 825 aa16.12■□□□□ 0.17
PCDHB2-201ENST00000194155 C8orf34Q49A92 452 aa16.12■□□□□ 0.17
PCDHB2-201ENST00000194155 PANK2Q9BZ23 570 aa16.12■□□□□ 0.17
PCDHB2-201ENST00000194155 TRAK2O60296 914 aa16.11■□□□□ 0.17
PCDHB2-201ENST00000194155 CHMP3Q9Y3E7 222 aa16.11■□□□□ 0.17
PCDHB2-201ENST00000194155 TCOF1Q13428 1488 aaKnown RBP16.11■□□□□ 0.17
PCDHB2-201ENST00000194155 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
PCDHB2-201ENST00000194155 PANK1Q8TE04 598 aa16.11■□□□□ 0.17
PCDHB2-201ENST00000194155 YEATS2Q9ULM3 1422 aa16.11■□□□□ 0.17
PCDHB2-201ENST00000194155 DNTTIP2Q5QJE6 756 aaKnown RBP16.1■□□□□ 0.17
PCDHB2-201ENST00000194155 SULT6B1Q6IMI4 303 aa16.1■□□□□ 0.17
PCDHB2-201ENST00000194155 RUNDC1Q96C34 613 aa16.1■□□□□ 0.17
PCDHB2-201ENST00000194155 NEO1Q92859 1461 aa16.1■□□□□ 0.17
PCDHB2-201ENST00000194155 PRKAR2BP31323 418 aa16.1■□□□□ 0.17
PCDHB2-201ENST00000194155 MAGI3Q5TCQ9 1506 aa16.1■□□□□ 0.17
PCDHB2-201ENST00000194155 RRP9O43818 475 aaKnown RBP16.09■□□□□ 0.17
PCDHB2-201ENST00000194155 ADAMTS2O95450 1211 aa16.09■□□□□ 0.17
PCDHB2-201ENST00000194155 ABCA8O94911 1581 aa16.09■□□□□ 0.17
PCDHB2-201ENST00000194155 RWDD1Q9H446 243 aaPredicted RBP16.09■□□□□ 0.17
PCDHB2-201ENST00000194155 FAM13BQ9NYF5 915 aa16.08■□□□□ 0.17
PCDHB2-201ENST00000194155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.08■□□□□ 0.16
PCDHB2-201ENST00000194155 MRE11P49959 708 aa16.08■□□□□ 0.16
PCDHB2-201ENST00000194155 NME9Q86XW9 330 aa16.08■□□□□ 0.16
PCDHB2-201ENST00000194155 RIMS2Q9UQ26 1411 aa16.07■□□□□ 0.16
PCDHB2-201ENST00000194155 UBAP1LF5GYI3 381 aa16.07■□□□□ 0.16
PCDHB2-201ENST00000194155 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
PCDHB2-201ENST00000194155 XRCC6P12956 609 aaKnown RBP eCLIP16.07■□□□□ 0.16
PCDHB2-201ENST00000194155 TCP11L2Q8N4U5 519 aa16.07■□□□□ 0.16
PCDHB2-201ENST00000194155 RBM10P98175 930 aaKnown RBP16.07■□□□□ 0.16
PCDHB2-201ENST00000194155 CHMP5Q9NZZ3 219 aa16.06■□□□□ 0.16
PCDHB2-201ENST00000194155 E9PSI1 815 aa16.06■□□□□ 0.16
PCDHB2-201ENST00000194155 ATP7AQ04656 1500 aa16.06■□□□□ 0.16
PCDHB2-201ENST00000194155 ESPNB1AK53 854 aa16.06■□□□□ 0.16
PCDHB2-201ENST00000194155 KCNA6P17658 529 aa16.06■□□□□ 0.16
PCDHB2-201ENST00000194155 TSPYL4Q9UJ04 414 aa16.06■□□□□ 0.16
PCDHB2-201ENST00000194155 MCM4P33991 863 aa16.05■□□□□ 0.16
PCDHB2-201ENST00000194155 A0A0U1RQG5 324 aaPredicted RBP16.05■□□□□ 0.16
PCDHB2-201ENST00000194155 GBP4Q96PP9 640 aa16.05■□□□□ 0.16
PCDHB2-201ENST00000194155 CFAP43Q8NDM7 1665 aa16.04■□□□□ 0.16
PCDHB2-201ENST00000194155 KRT28Q7Z3Y7 464 aa16.04■□□□□ 0.16
PCDHB2-201ENST00000194155 TATP17735 454 aaPredicted RBP16.04■□□□□ 0.16
PCDHB2-201ENST00000194155 TAF7LQ5H9L4 462 aa16.04■□□□□ 0.16
PCDHB2-201ENST00000194155 SHANK2Q9UPX8 1470 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms